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The map label for this gene is rsmI [H]

Identifier: 94985738

GI number: 94985738

Start: 1742802

End: 1743644

Strand: Reverse

Name: rsmI [H]

Synonym: Dgeo_1638

Alternate gene names: 94985738

Gene position: 1743644-1742802 (Counterclockwise)

Preceding gene: 94985739

Following gene: 94985737

Centisome position: 70.67

GC content: 70.11

Gene sequence:

>843_bases
ATGACTGCCGCTTTCCCCACGCCCCACGTCTGGCTGGTGCCGACCCCAGTGGGTCATCTGGGCGATCTCACTTTCCGCGC
CGTGGAGGTCCTGCGCGCCTGCGACGCGGTGGCCTGCGAGGACACCCGGCGAACCGGAGCCTTGCTCGCCCATCTGGGCA
TCGGCAAGCCGCTGGTGCGCCTGGACGCGCACACCATGCACCGCGCGCCCCAGGTGTTGGAGACCTATCCCCGCCTGGCC
TACGTCAGTGACGCGGGGACGCCGGGCATCAGCGATCCGGGGACCGAGCTGGTGCGGGCGGCGGTCGCGGCAGAGATTCC
GGTGGAGGTGCTTCCAGGCGCGACCGCTTTTGTTCCGGCGCTTGTGCTGTCGGGCTTGCCTGCTGCCCGCTTCACCTTTG
AAGGGTTCCTGCCCCGCGCGGGCCGTGAGCGCCGGGAAAGACTCGCCGCCATCGCGGCCCGGTCCGAGACAACTGTGCTC
TACGAGAGCCCCCACCGCCTGGCCGCCACCCTGGCTGACCTCGCGGGGGTCTGCGGTGAGACGCGCTCAGCCAGCGTCAC
GCGCGAACTGTCCAAGAAGTTCGAGGAGACGGTGCGGGGAACGCTGGCAGAACTGACCGCTCGGTTTGCGGGGGGCGTGC
GCGGTGAGATTGTGGTGGTCGTGGCGGGCCGCCCGGCGGGGGAGGCCGTGGCGGGCGAGGAATCTCCCGACCACGCCGCC
CTGGCGCGGACCTGGGCGCAGGCCGGCAAGGGCGCTCGGGAGATTCGGGAATTGCTCATGGCACAGGGTTTGCGTAAGAA
TGACGCTTATGCGCTGGCCCTTCAGGTCACGCAGGACGCCTGA

Upstream 100 bases:

>100_bases
AGGGGGAAAAGATTAGGGGTCTTCTGCCGCCCGCCGCTTGCATCCAGCGTTTCGGGCTGGCGGTGGGCGGCTGTTGGCTG
GCCGCCAAGAAAGGTTCTCC

Downstream 100 bases:

>100_bases
ACTTCTTGCCCTCCTTCCGAGGATTTCCTGTGACTGACATTCCCCACCTGTCCACCCATGCCAACCCCGCCGGAATCAAG
CGCCTGGCCGTCCTGACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTAAFPTPHVWLVPTPVGHLGDLTFRAVEVLRACDAVACEDTRRTGALLAHLGIGKPLVRLDAHTMHRAPQVLETYPRLA
YVSDAGTPGISDPGTELVRAAVAAEIPVEVLPGATAFVPALVLSGLPAARFTFEGFLPRAGRERRERLAAIAARSETTVL
YESPHRLAATLADLAGVCGETRSASVTRELSKKFEETVRGTLAELTARFAGGVRGEIVVVVAGRPAGEAVAGEESPDHAA
LARTWAQAGKGAREIRELLMAQGLRKNDAYALALQVTQDA

Sequences:

>Translated_280_residues
MTAAFPTPHVWLVPTPVGHLGDLTFRAVEVLRACDAVACEDTRRTGALLAHLGIGKPLVRLDAHTMHRAPQVLETYPRLA
YVSDAGTPGISDPGTELVRAAVAAEIPVEVLPGATAFVPALVLSGLPAARFTFEGFLPRAGRERRERLAAIAARSETTVL
YESPHRLAATLADLAGVCGETRSASVTRELSKKFEETVRGTLAELTARFAGGVRGEIVVVVAGRPAGEAVAGEESPDHAA
LARTWAQAGKGAREIRELLMAQGLRKNDAYALALQVTQDA
>Mature_279_residues
TAAFPTPHVWLVPTPVGHLGDLTFRAVEVLRACDAVACEDTRRTGALLAHLGIGKPLVRLDAHTMHRAPQVLETYPRLAY
VSDAGTPGISDPGTELVRAAVAAEIPVEVLPGATAFVPALVLSGLPAARFTFEGFLPRAGRERRERLAAIAARSETTVLY
ESPHRLAATLADLAGVCGETRSASVTRELSKKFEETVRGTLAELTARFAGGVRGEIVVVVAGRPAGEAVAGEESPDHAAL
ARTWAQAGKGAREIRELLMAQGLRKNDAYALALQVTQDA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=227, Percent_Identity=43.6123348017621, Blast_Score=171, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29607; Mature: 29476

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAFPTPHVWLVPTPVGHLGDLTFRAVEVLRACDAVACEDTRRTGALLAHLGIGKPLVR
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHH
LDAHTMHRAPQVLETYPRLAYVSDAGTPGISDPGTELVRAAVAAEIPVEVLPGATAFVPA
HHHHHHHHCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHH
LVLSGLPAARFTFEGFLPRAGRERRERLAAIAARSETTVLYESPHRLAATLADLAGVCGE
HHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC
TRSASVTRELSKKFEETVRGTLAELTARFAGGVRGEIVVVVAGRPAGEAVAGEESPDHAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHH
LARTWAQAGKGAREIRELLMAQGLRKNDAYALALQVTQDA
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
TAAFPTPHVWLVPTPVGHLGDLTFRAVEVLRACDAVACEDTRRTGALLAHLGIGKPLVR
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHH
LDAHTMHRAPQVLETYPRLAYVSDAGTPGISDPGTELVRAAVAAEIPVEVLPGATAFVPA
HHHHHHHHCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHH
LVLSGLPAARFTFEGFLPRAGRERRERLAAIAARSETTVLYESPHRLAATLADLAGVCGE
HHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC
TRSASVTRELSKKFEETVRGTLAELTARFAGGVRGEIVVVVAGRPAGEAVAGEESPDHAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHH
LARTWAQAGKGAREIRELLMAQGLRKNDAYALALQVTQDA
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]