Definition | Deinococcus geothermalis DSM 11300, complete genome. |
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Accession | NC_008025 |
Length | 2,467,205 |
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The map label for this gene is purM [H]
Identifier: 94985716
GI number: 94985716
Start: 1718605
End: 1719672
Strand: Reverse
Name: purM [H]
Synonym: Dgeo_1616
Alternate gene names: 94985716
Gene position: 1719672-1718605 (Counterclockwise)
Preceding gene: 94985717
Following gene: 94985715
Centisome position: 69.7
GC content: 68.82
Gene sequence:
>1068_bases ATGACGCAAGGCAAGATGGACTCGGCCCAGGCGGGAGCATCGGCATACGAGCGAGCAGGTGTGAGCATCGACGCGGGGCA CCGGGCCGTCGCCCTGATGAAAGACGCGGTTGCCCGCACCCACACCCCCGCCGTTTTGGGCGGCATCGGTGGCTTCGGCG GGCTGTTTCGCGCGGCTTTTGGGCACCTGAATGACCCCGTGCTGGTCGCCTCGACCGACGGTGTGGGCACCAAAACGAAG GTGGCGGTGCGGACTGGGCGCTTTGCGGGACTGGGCGCAGACATCGTGAACCACTGTGTCAACGACATCCTGGTGCAGGG TGCGCGGCCCCTTTTCTTCCTCGACTACGTCGCGATGGGGCGGCTCCTGCCCGAGCGGGTGGCGGAGGTGGTGACCGGCG CGGCGCGGGCCTGTGAGGCGCTGGGCGTGGCGCTGCTGGGCGGGGAGACCGCTGAGATGCCCGGTGTATATGTAGAGGGC GAACTGGATATCGTGGGCACGATTGTGGGTGTGGTGGACCGGCACAAGCTCATCGACGGCGCGCGCCTGCAGCCCGGTGA CGTGGTGATCGCCCTGCCCAGCACGGGACTCCACACCAACGGATATAGCCTGGCGCGGATGGCCCTGGCCGACTTGGACT GGGAGGAGGCCCGTGCGGACCTGGGCGGTGAGCGGCTGGCTGATCTGCTCACCGTGCCGCACCGGGCCTACCTGGGGGCC TTTGACGCGCTGCAGGCGGCGGGCGTGGACGTGCGCGGCATGGCCCATATCACCGGGGGCGGACTGGTGGACAACCCGCC GCGCATCTTTCCAGCCGGGGTGGGAATGCGGGTAAACACCGCGTCTTGGACGGTGCCGCCCCTCTTCGAGCTGATCGTGC GCCAGGCGGGAGTGGCGCGGGAGGAAGCCTTCCGTGCGCTGAACATGGGGGTCGGTTTCCTGTTCATCGTGCCCGCCGCG CAGGGAGAAGCGGCGCTGGCCTCCTTGCGCGGTGCGGGCGAGTCGCCGTGGGTGATCGGGGAGATGGTGCCCGGTTCCGG CGTGACCTTTGACGGAGTACCTGCTTGA
Upstream 100 bases:
>100_bases TGCCCTGCGCTGGTGGCTGGCCCGCCGCGCCGTCAAGGAGGCCAAAGTCGGGTAAACTGCGCGGCGGACCGCCCCAACTG GGGGCGCTTCCGGGAGGAGC
Downstream 100 bases:
>100_bases CCAGGCACCGGCCCCCGACGGGCTTCACCCCACCCGATCGCCGGACGGCAACCGAGTTTTGGGTCGTGCGGCACGGCGAG AGCATCTGGAACGCCGACGG
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTQGKMDSAQAGASAYERAGVSIDAGHRAVALMKDAVARTHTPAVLGGIGGFGGLFRAAFGHLNDPVLVASTDGVGTKTK VAVRTGRFAGLGADIVNHCVNDILVQGARPLFFLDYVAMGRLLPERVAEVVTGAARACEALGVALLGGETAEMPGVYVEG ELDIVGTIVGVVDRHKLIDGARLQPGDVVIALPSTGLHTNGYSLARMALADLDWEEARADLGGERLADLLTVPHRAYLGA FDALQAAGVDVRGMAHITGGGLVDNPPRIFPAGVGMRVNTASWTVPPLFELIVRQAGVAREEAFRALNMGVGFLFIVPAA QGEAALASLRGAGESPWVIGEMVPGSGVTFDGVPA
Sequences:
>Translated_355_residues MTQGKMDSAQAGASAYERAGVSIDAGHRAVALMKDAVARTHTPAVLGGIGGFGGLFRAAFGHLNDPVLVASTDGVGTKTK VAVRTGRFAGLGADIVNHCVNDILVQGARPLFFLDYVAMGRLLPERVAEVVTGAARACEALGVALLGGETAEMPGVYVEG ELDIVGTIVGVVDRHKLIDGARLQPGDVVIALPSTGLHTNGYSLARMALADLDWEEARADLGGERLADLLTVPHRAYLGA FDALQAAGVDVRGMAHITGGGLVDNPPRIFPAGVGMRVNTASWTVPPLFELIVRQAGVAREEAFRALNMGVGFLFIVPAA QGEAALASLRGAGESPWVIGEMVPGSGVTFDGVPA >Mature_354_residues TQGKMDSAQAGASAYERAGVSIDAGHRAVALMKDAVARTHTPAVLGGIGGFGGLFRAAFGHLNDPVLVASTDGVGTKTKV AVRTGRFAGLGADIVNHCVNDILVQGARPLFFLDYVAMGRLLPERVAEVVTGAARACEALGVALLGGETAEMPGVYVEGE LDIVGTIVGVVDRHKLIDGARLQPGDVVIALPSTGLHTNGYSLARMALADLDWEEARADLGGERLADLLTVPHRAYLGAF DALQAAGVDVRGMAHITGGGLVDNPPRIFPAGVGMRVNTASWTVPPLFELIVRQAGVAREEAFRALNMGVGFLFIVPAAQ GEAALASLRGAGESPWVIGEMVPGSGVTFDGVPA
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=338, Percent_Identity=40.2366863905325, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI209869995, Length=338, Percent_Identity=40.2366863905325, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI209869993, Length=338, Percent_Identity=40.2366863905325, Blast_Score=241, Evalue=9e-64, Organism=Escherichia coli, GI1788845, Length=326, Percent_Identity=43.558282208589, Blast_Score=263, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17567511, Length=342, Percent_Identity=35.0877192982456, Blast_Score=187, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6321203, Length=345, Percent_Identity=38.8405797101449, Blast_Score=218, Evalue=1e-57, Organism=Drosophila melanogaster, GI24582400, Length=287, Percent_Identity=33.4494773519164, Blast_Score=165, Evalue=4e-41,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 36604; Mature: 36473
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGKMDSAQAGASAYERAGVSIDAGHRAVALMKDAVARTHTPAVLGGIGGFGGLFRAAF CCCCCCCHHHHCHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHH GHLNDPVLVASTDGVGTKTKVAVRTGRFAGLGADIVNHCVNDILVQGARPLFFLDYVAMG HCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH RLLPERVAEVVTGAARACEALGVALLGGETAEMPGVYVEGELDIVGTIVGVVDRHKLIDG HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCC ARLQPGDVVIALPSTGLHTNGYSLARMALADLDWEEARADLGGERLADLLTVPHRAYLGA CCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCHHHHHHH FDALQAAGVDVRGMAHITGGGLVDNPPRIFPAGVGMRVNTASWTVPPLFELIVRQAGVAR HHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHCCHH EEAFRALNMGVGFLFIVPAAQGEAALASLRGAGESPWVIGEMVPGSGVTFDGVPA HHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TQGKMDSAQAGASAYERAGVSIDAGHRAVALMKDAVARTHTPAVLGGIGGFGGLFRAAF CCCCCCHHHHCHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHH GHLNDPVLVASTDGVGTKTKVAVRTGRFAGLGADIVNHCVNDILVQGARPLFFLDYVAMG HCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH RLLPERVAEVVTGAARACEALGVALLGGETAEMPGVYVEGELDIVGTIVGVVDRHKLIDG HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCC ARLQPGDVVIALPSTGLHTNGYSLARMALADLDWEEARADLGGERLADLLTVPHRAYLGA CCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCHHHHHHH FDALQAAGVDVRGMAHITGGGLVDNPPRIFPAGVGMRVNTASWTVPPLFELIVRQAGVAR HHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHCCHH EEAFRALNMGVGFLFIVPAAQGEAALASLRGAGESPWVIGEMVPGSGVTFDGVPA HHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA