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The map label for this gene is ydjZ [H]

Identifier: 94985717

GI number: 94985717

Start: 1719718

End: 1720422

Strand: Reverse

Name: ydjZ [H]

Synonym: Dgeo_1617

Alternate gene names: 94985717

Gene position: 1720422-1719718 (Counterclockwise)

Preceding gene: 94985719

Following gene: 94985716

Centisome position: 69.73

GC content: 70.5

Gene sequence:

>705_bases
GTGACTGCCGCCTTTCCCCGGAATGCTCGGCGCGTGCGCGTTCTGGTCTTGGGTGGCGCGACTCTCCTGCTGGTTGGGGT
CGGCCTGACGCCGGACGTGCGGGCCTTTTTGCTGCGCGGGTATGCGGCCCTCACTTCCGGCGACCCCACCGTCACCCATG
CTTTTGTGGACGGGCTGGGCTGGGCGGGGCCGCTCGCACTGATCACCGGCTTTGTCCTGCAGGCGGTGTTTCCGGTGCTG
CCCGCGCTGGTGATGACCGCCGTGACCGCCCGCGCGTACGGTCCGGTCGAGGGGTTTTGCATCGTGTACCTCGGCACGCT
GCTGGGGGCCGCCGCCGGATACGGCCTGGGGCGCGCGCTCGGCGATACCCTGGTGCGAACGCTGGCAGGAGAGCGTGCCC
GGAATGCCGCCCATACCTTTGCCATGCGCTACGGCGTGCAGGGCGTCTTGCTGGTGCGCCTGATGCCGGTGCTCTCGGCC
GACGTGATGAATCTGGTGGCTGGTGCCGTGCAGATGCCGTTTCGCGCCTTTCTGCTGGCAACGGCGGCCGGGGCGCTGCC
GGTGACCGGGCTGGTTGTGTGGCTGAGCGGCAGTGCGCGGCGGATGGCGTGGGGGGTGGGGCTGCTTTCTGCGGGGGTGG
CGCTGGTGGGTGCCCTGCGCTGGTGGCTGGCCCGCCGCGCCGTCAAGGAGGCCAAAGTCGGGTAA

Upstream 100 bases:

>100_bases
ACAGCACGCGGGGGAGCAGGTCGGGGTGCATCGCGGGGCAGTTTAGCCTGCTTCGGCCGCCTCGTAAGTTCTTATCACGC
GCTCCGCCTACACTGGGAGC

Downstream 100 bases:

>100_bases
ACTGCGCGGCGGACCGCCCCAACTGGGGGCGCTTCCGGGAGGAGCATGACGCAAGGCAAGATGGACTCGGCCCAGGCGGG
AGCATCGGCATACGAGCGAG

Product: DedA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTAAFPRNARRVRVLVLGGATLLLVGVGLTPDVRAFLLRGYAALTSGDPTVTHAFVDGLGWAGPLALITGFVLQAVFPVL
PALVMTAVTARAYGPVEGFCIVYLGTLLGAAAGYGLGRALGDTLVRTLAGERARNAAHTFAMRYGVQGVLLVRLMPVLSA
DVMNLVAGAVQMPFRAFLLATAAGALPVTGLVVWLSGSARRMAWGVGLLSAGVALVGALRWWLARRAVKEAKVG

Sequences:

>Translated_234_residues
MTAAFPRNARRVRVLVLGGATLLLVGVGLTPDVRAFLLRGYAALTSGDPTVTHAFVDGLGWAGPLALITGFVLQAVFPVL
PALVMTAVTARAYGPVEGFCIVYLGTLLGAAAGYGLGRALGDTLVRTLAGERARNAAHTFAMRYGVQGVLLVRLMPVLSA
DVMNLVAGAVQMPFRAFLLATAAGALPVTGLVVWLSGSARRMAWGVGLLSAGVALVGALRWWLARRAVKEAKVG
>Mature_233_residues
TAAFPRNARRVRVLVLGGATLLLVGVGLTPDVRAFLLRGYAALTSGDPTVTHAFVDGLGWAGPLALITGFVLQAVFPVLP
ALVMTAVTARAYGPVEGFCIVYLGTLLGAAAGYGLGRALGDTLVRTLAGERARNAAHTFAMRYGVQGVLLVRLMPVLSAD
VMNLVAGAVQMPFRAFLLATAAGALPVTGLVVWLSGSARRMAWGVGLLSAGVALVGALRWWLARRAVKEAKVG

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=224, Percent_Identity=29.9107142857143, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24263; Mature: 24132

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAFPRNARRVRVLVLGGATLLLVGVGLTPDVRAFLLRGYAALTSGDPTVTHAFVDGLG
CCCCCCCCCCEEEEEEECCHHHHHEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
WAGPLALITGFVLQAVFPVLPALVMTAVTARAYGPVEGFCIVYLGTLLGAAAGYGLGRAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GDTLVRTLAGERARNAAHTFAMRYGVQGVLLVRLMPVLSADVMNLVAGAVQMPFRAFLLA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAGALPVTGLVVWLSGSARRMAWGVGLLSAGVALVGALRWWLARRAVKEAKVG
HHCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAAFPRNARRVRVLVLGGATLLLVGVGLTPDVRAFLLRGYAALTSGDPTVTHAFVDGLG
CCCCCCCCCEEEEEEECCHHHHHEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
WAGPLALITGFVLQAVFPVLPALVMTAVTARAYGPVEGFCIVYLGTLLGAAAGYGLGRAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GDTLVRTLAGERARNAAHTFAMRYGVQGVLLVRLMPVLSADVMNLVAGAVQMPFRAFLLA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAGALPVTGLVVWLSGSARRMAWGVGLLSAGVALVGALRWWLARRAVKEAKVG
HHCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]