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The map label for this gene is deoD [H]

Identifier: 94985696

GI number: 94985696

Start: 1695899

End: 1696615

Strand: Reverse

Name: deoD [H]

Synonym: Dgeo_1596

Alternate gene names: 94985696

Gene position: 1696615-1695899 (Counterclockwise)

Preceding gene: 94985700

Following gene: 94985695

Centisome position: 68.77

GC content: 68.2

Gene sequence:

>717_bases
ATGAGTCAGATTCATGTTCGTGCTCAGCCCGGCGCTGTGGCTGAGTATGTCTTGCTCCCCGGCGATCCCAACCGCACCCG
CCGGATCGCAGAGACATATCTGGAAAGCGCCACGCTCTACACCGATCACCGGGGACTGCTGGGCTTTACCGGGACGTATC
AGGGCGTCCCCGTCAGCGTGCAGACGACCGGAATGGGCTGTCCAAGCGCGGCCATTGTGGCTGAGGAACTCGCGCGGCTG
GGTGCCAAGACCCTGATCCGCGTCGGCACGCTGGGCGGCGCCAGCCCGCAGGTCCAGCCCGCCGATCTGGTGATTGCCAC
CGCCACGGTGCCCAACGACGGCACCACCCGCCAACTGCTGAACGGTGCCCCCTACGCGCCCGCCGCGAGCTTTGAGGTGG
TCGAGGCCGCCGTCCGGGCCGCCCGCGCCCAGGAGGTGCCGCATCACGTCGGCCTGATCATGACCGAAGACGCCTTCTAT
GCCAGTACCCCCGAACATGCCCGCCTGTGGGCCTCGCGCGGCGTCCTGGGCTTTGAGATGGAGGCGAGCGCGGTGTTTCT
GGTGGCGGCCCAACACGGCCTGCGCGCCGGCTGCCTCACCGCCTGCAGCAACGACATCGGTGACCCACAGCTTGTTCCTG
AGGAGGTCCTGGCAGCGGGTGTGGACCGCATGATCCGAGTGGCGCTGGGTGCCATCGTGACGCTGGCCGGGGGCTGA

Upstream 100 bases:

>100_bases
CGCTTCCTCAGAAGCAGGGCAGCCAAGGTGGCCCCGAACGAGCGCGGCCGTTGCTTGTCGGCCAGTGAGGGGGCAGGTCC
GGCCCCGTATACTCGCCCGC

Downstream 100 bases:

>100_bases
GAGACGCGGCCCGCAGCCAGGACCTCTTTTCCAGCTGCTTTTCCGTGTCAGGATTGAACCATGACGATGCTCGACGAACT
CGAATTTCGCAACCTGCACC

Product: purine phosphorylases family protein 1

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSQIHVRAQPGAVAEYVLLPGDPNRTRRIAETYLESATLYTDHRGLLGFTGTYQGVPVSVQTTGMGCPSAAIVAEELARL
GAKTLIRVGTLGGASPQVQPADLVIATATVPNDGTTRQLLNGAPYAPAASFEVVEAAVRAARAQEVPHHVGLIMTEDAFY
ASTPEHARLWASRGVLGFEMEASAVFLVAAQHGLRAGCLTACSNDIGDPQLVPEEVLAAGVDRMIRVALGAIVTLAGG

Sequences:

>Translated_238_residues
MSQIHVRAQPGAVAEYVLLPGDPNRTRRIAETYLESATLYTDHRGLLGFTGTYQGVPVSVQTTGMGCPSAAIVAEELARL
GAKTLIRVGTLGGASPQVQPADLVIATATVPNDGTTRQLLNGAPYAPAASFEVVEAAVRAARAQEVPHHVGLIMTEDAFY
ASTPEHARLWASRGVLGFEMEASAVFLVAAQHGLRAGCLTACSNDIGDPQLVPEEVLAAGVDRMIRVALGAIVTLAGG
>Mature_237_residues
SQIHVRAQPGAVAEYVLLPGDPNRTRRIAETYLESATLYTDHRGLLGFTGTYQGVPVSVQTTGMGCPSAAIVAEELARLG
AKTLIRVGTLGGASPQVQPADLVIATATVPNDGTTRQLLNGAPYAPAASFEVVEAAVRAARAQEVPHHVGLIMTEDAFYA
STPEHARLWASRGVLGFEMEASAVFLVAAQHGLRAGCLTACSNDIGDPQLVPEEVLAAGVDRMIRVALGAIVTLAGG

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=238, Percent_Identity=37.8151260504202, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1790265, Length=200, Percent_Identity=33, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 24766; Mature: 24634

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIHVRAQPGAVAEYVLLPGDPNRTRRIAETYLESATLYTDHRGLLGFTGTYQGVPVSV
CCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHEEEECCCCCEEECCCCCCCEEEE
QTTGMGCPSAAIVAEELARLGAKTLIRVGTLGGASPQVQPADLVIATATVPNDGTTRQLL
EECCCCCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
NGAPYAPAASFEVVEAAVRAARAQEVPHHVGLIMTEDAFYASTPEHARLWASRGVLGFEM
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCCCCHHHHHHHHCCEEEEEE
EASAVFLVAAQHGLRAGCLTACSNDIGDPQLVPEEVLAAGVDRMIRVALGAIVTLAGG
CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure 
SQIHVRAQPGAVAEYVLLPGDPNRTRRIAETYLESATLYTDHRGLLGFTGTYQGVPVSV
CCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHEEEECCCCCEEECCCCCCCEEEE
QTTGMGCPSAAIVAEELARLGAKTLIRVGTLGGASPQVQPADLVIATATVPNDGTTRQLL
EECCCCCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
NGAPYAPAASFEVVEAAVRAARAQEVPHHVGLIMTEDAFYASTPEHARLWASRGVLGFEM
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCCCCHHHHHHHHCCEEEEEE
EASAVFLVAAQHGLRAGCLTACSNDIGDPQLVPEEVLAAGVDRMIRVALGAIVTLAGG
CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA