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The map label for this gene is fni [H]

Identifier: 94985481

GI number: 94985481

Start: 1462678

End: 1463718

Strand: Reverse

Name: fni [H]

Synonym: Dgeo_1381

Alternate gene names: 94985481

Gene position: 1463718-1462678 (Counterclockwise)

Preceding gene: 94985482

Following gene: 94985479

Centisome position: 59.33

GC content: 70.7

Gene sequence:

>1041_bases
GTGATCGACCCCGACCTGAACGCTGCCGCGCCCACAGGCCTCCCGGCACGCAAGCTGCGGCATCTTGAAGCCTGTCTGCG
TCCGGAAAGCCAGTACATGGGCGTGACCACTGGGCTGGAGCGGGTGCCCTGGCCTTACCGGGCGCTCCCAGAGCTGGACC
TGGAGGCGGTGGACCTCACGACGACCTTCCTGGGTCGGAGACTGCGCGCACCGGTGTTGATTGGAGCGATGACGGGCGGC
GCGCAGCGAGCGGAGGTCATCAATCGCAACCTCGCCACCGCCGCGGAGCGGTTGGGCATCGGGATGATGTTGGGGTCACA
GCGAGTGATGCTGGAGCGCCCCGAAGCAGCGGTCAGCTTTCGCGTGCGCGACGTGGCCCCCGGTGTACTGCTGCTGGGAA
ATCTCGGAGCGGCGCAGTTCCTGCTGGGGTACGGCGTGGCCGAGGCCGAGCGGGCGGTGCGGGCGGTGGAGGCGGACGGC
CTCGCCATCCATCTCAACCCGCTGCAAGAAGCCATGCAGGCCGGTGGGGACACGCGCTGGCGAGGTCTCGCGGCGCGGCT
GGCCGAGGTGGTGCCCGCTCTGCCTTTTCCGGTGATTCTCAAGGAGGTGGGGCATGGCCTGGATCCGGCCACTGTGCAGA
CCGTGGCCACGGCGGGGTTTGCGGCGCTGGACGTGGCGGGCGCGGGCGGTACGAGTTGGGCGCGGGTTGAGCAACTGGTG
CGCTACGGCGCCGTTCTCGCGCCGGACCTGTGCGAAGTGGGACTGCCCACCGCACCGGCCATCGTGGAGGCGCGCCGGGC
AGCTCCCGGAACACCCCTGATCGCCTCCGGGGGCATCCGCACCGGTTTGGACGCAGCGCGTGCCCTGGCCCTCGGCGCGC
AGGTGGTGGCGGTGGCTCGGCCTCTCCTCGCTCCCGCGCTGGAGAGTGCGGCGGCGGTAGAGGCGTGGCTTGCGCGGTTC
ATTCACGAGCTGCGGGTGGCGCTGTTTGTGGGCGGCTTCAGGAGTGTGGAGGCGGTGCGGGGCCGGCTCGAGCTGGTTTG
A

Upstream 100 bases:

>100_bases
GTTGCGTTGCGCTTCTGAACGTCCGTTCTTCCGGCGCTCAAAAAGAGTAGCGCAGGTTCAGAAATCTGTCAACGGTCATC
GGGGGCGCTAGGCTGGAGGT

Downstream 100 bases:

>100_bases
GCCGGCAAGCCTTTAGCCTGCTGCCACCCGCTCTACCCGCGCTCCCAGCCCGGTCAGCACCTCGTATTCTACCGTGCCGC
CCCACGCGGCCACGTCGGTC

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MIDPDLNAAAPTGLPARKLRHLEACLRPESQYMGVTTGLERVPWPYRALPELDLEAVDLTTTFLGRRLRAPVLIGAMTGG
AQRAEVINRNLATAAERLGIGMMLGSQRVMLERPEAAVSFRVRDVAPGVLLLGNLGAAQFLLGYGVAEAERAVRAVEADG
LAIHLNPLQEAMQAGGDTRWRGLAARLAEVVPALPFPVILKEVGHGLDPATVQTVATAGFAALDVAGAGGTSWARVEQLV
RYGAVLAPDLCEVGLPTAPAIVEARRAAPGTPLIASGGIRTGLDAARALALGAQVVAVARPLLAPALESAAAVEAWLARF
IHELRVALFVGGFRSVEAVRGRLELV

Sequences:

>Translated_346_residues
MIDPDLNAAAPTGLPARKLRHLEACLRPESQYMGVTTGLERVPWPYRALPELDLEAVDLTTTFLGRRLRAPVLIGAMTGG
AQRAEVINRNLATAAERLGIGMMLGSQRVMLERPEAAVSFRVRDVAPGVLLLGNLGAAQFLLGYGVAEAERAVRAVEADG
LAIHLNPLQEAMQAGGDTRWRGLAARLAEVVPALPFPVILKEVGHGLDPATVQTVATAGFAALDVAGAGGTSWARVEQLV
RYGAVLAPDLCEVGLPTAPAIVEARRAAPGTPLIASGGIRTGLDAARALALGAQVVAVARPLLAPALESAAAVEAWLARF
IHELRVALFVGGFRSVEAVRGRLELV
>Mature_346_residues
MIDPDLNAAAPTGLPARKLRHLEACLRPESQYMGVTTGLERVPWPYRALPELDLEAVDLTTTFLGRRLRAPVLIGAMTGG
AQRAEVINRNLATAAERLGIGMMLGSQRVMLERPEAAVSFRVRDVAPGVLLLGNLGAAQFLLGYGVAEAERAVRAVEADG
LAIHLNPLQEAMQAGGDTRWRGLAARLAEVVPALPFPVILKEVGHGLDPATVQTVATAGFAALDVAGAGGTSWARVEQLV
RYGAVLAPDLCEVGLPTAPAIVEARRAAPGTPLIASGGIRTGLDAARALALGAQVVAVARPLLAPALESAAAVEAWLARF
IHELRVALFVGGFRSVEAVRGRLELV

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 36253; Mature: 36253

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPDLNAAAPTGLPARKLRHLEACLRPESQYMGVTTGLERVPWPYRALPELDLEAVDLT
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHHCHHHCCCCCCCCCCCCCHHHHHH
TTFLGRRLRAPVLIGAMTGGAQRAEVINRNLATAAERLGIGMMLGSQRVMLERPEAAVSF
HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEECCCHHHEE
RVRDVAPGVLLLGNLGAAQFLLGYGVAEAERAVRAVEADGLAIHLNPLQEAMQAGGDTRW
EEHHHCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHH
RGLAARLAEVVPALPFPVILKEVGHGLDPATVQTVATAGFAALDVAGAGGTSWARVEQLV
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHEEECCCCCCHHHHHHHHH
RYGAVLAPDLCEVGLPTAPAIVEARRAAPGTPLIASGGIRTGLDAARALALGAQVVAVAR
HHCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
PLLAPALESAAAVEAWLARFIHELRVALFVGGFRSVEAVRGRLELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDPDLNAAAPTGLPARKLRHLEACLRPESQYMGVTTGLERVPWPYRALPELDLEAVDLT
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHHCHHHCCCCCCCCCCCCCHHHHHH
TTFLGRRLRAPVLIGAMTGGAQRAEVINRNLATAAERLGIGMMLGSQRVMLERPEAAVSF
HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEECCCHHHEE
RVRDVAPGVLLLGNLGAAQFLLGYGVAEAERAVRAVEADGLAIHLNPLQEAMQAGGDTRW
EEHHHCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHH
RGLAARLAEVVPALPFPVILKEVGHGLDPATVQTVATAGFAALDVAGAGGTSWARVEQLV
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHEEECCCCCCHHHHHHHHH
RYGAVLAPDLCEVGLPTAPAIVEARRAAPGTPLIASGGIRTGLDAARALALGAQVVAVAR
HHCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
PLLAPALESAAAVEAWLARFIHELRVALFVGGFRSVEAVRGRLELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]