| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985479
Identifier: 94985479
GI number: 94985479
Start: 1459607
End: 1461556
Strand: Reverse
Name: 94985479
Synonym: Dgeo_1379
Alternate gene names: NA
Gene position: 1461556-1459607 (Counterclockwise)
Preceding gene: 94985481
Following gene: 94985478
Centisome position: 59.24
GC content: 67.64
Gene sequence:
>1950_bases ATGCGAGCTGCTCCCTTCCCTCTCCACCTGCCCCGCACTGCGCTGCTGACCCTCGCCGCCCTTCTCGGCAGCGGCGCTCT CGCCCAGACCGGCGGCATCCTGCCCTTGGTCTCGGTGGGGGAGAAGTGGCCGCAGGCGCAGGAAACGTACCTGATCCGCG TTTCGCCGCAGGATGCCGGGAAACCCCTGGGTCTAGAGGTATACAGCCCGACGTTTAACCTGGCGGACTACGTGGATGGT CGCCGGGGTGCCGGATACTTCGGGGACGAGCTGTACAAGAAGAACGAGCCTTTCGAGACGACCTTTACCCTCAGCGGCCC CGGCGGCACGGTCGTAGAGCGGCGTTTTTCCGCCAACCGCGAGCACACCTGGGAAAGTCTGTACTCGGGGGGGCTTCCGG CGGGCACCTACACCCTCCGGGTCAGCAGTCGGGGCGACGGCAAGAACTCGTTCGCGCTGCGGACAGCCGCCCCCTTTGTG CTGGAAACCAGTGACTTTTCGGTGAATGCCCGTGACACCGAGCAGGTGCCGCTGCTGGCGGCCCGTTTGAATGTCCCCGC CGAGTGGGTGGGCCGGACCCTCAGCGTGCTGAATTACGACGTAGACGGTCCTCAGGAGGCCGAAACCTGGGTGGTGCAGC CCGGCGGGAAGCGGGTGAACCTCACCCCAAGTGACAACGGCAAGAGTGCGACCGACCGCTTTTTGATCACCCCCGACCTC GTGGGCGAGTGGCAGGTCTTCCTCCGCGTGTTGCCCACCACTCGGCAGTATTCCAACGCGATTCGGTACTCGTTTCGCCT GGAGGGTCAGCCCGTGACGGCCCGCGTGGGGGGGTTCACCCCGCCGGAAGGCCTGAAGATGACCAACCAACTGCTGGTGG ACGTGGTGGATCCCCAGGGCCGCCCCATTCCCGGCGCGAGCTACACCCTGTTGGGTGACAGCCTGGTGCGGCCCAGCCTG CCCCCCGGCTATATCCCGGTGAGCAGCGCCATCGTCTCGGGCACCGGCAACGTTGTGTCCCCCACCGAGATTCGGTATCA GCCCGGCTACACCCGGCTGCGGTTTGTGGCCCGCCCCGCCCAGGGACAGCTCAGTGTGGATGCGGTGGCAGTGTACGGTG ACCAGCGCCTGCCGCTGACCGGAATTCCCTTCGAGGTGTCGGGCCACACCTTCAACACGCCCGCGACGGTGCCGCTTGCC CCCGGCGACTACACGGTCACGCCCAGCTCTATGCCCGGAAGCACCGTGACGCCGCCCCCGCCCGCCCATGTGTCCGATGC GGGGACCGGCCGGATCACCCTCGAGTACCGGGTCCAGAGCGAACTCACGCTGTCGGCGGCGCCGGACATTGTGAATGCCT GCGACGTGACGCAGCTCACCGCGACAGCCCGGACCGATTTTCCGCAGCGCCTTCCGGCCCGGCTGCGGCTGGAACTTCCA GCGGGCTGGTCGAGCGACTATCCGCTGGAGGTGCCGGGTGAGATCAGCAGCGGCTCACCCCTGCGCCTGAAAGTTCCTGT CCGCGTCTGCCGCAGCGACACCGCCGAGGCGGTCCTCGATCCCCTCGACCTGCGGACCACCGGCCAGGCGCGCGTTCGTA ATCCCGGCGGCGCGAATGTCACCCGCACCGTGCAGGGCGGAGCCCGCGCCACCCTCAGCAAGAGCGTGGAGGCCGCCCCC CAGGGTTACCTGGTCACCCTGACCCTCACCGTGGACCGCACGCTGGAAAATGTCCGCCTGCTTGATCCGCTGCCCAGCGG CGGGAGCACGTCCGCTGTGCGCGGCCCCCTCAACGTGCAGGGCCCCAGCTTGGCGGGAGTTGCAGCCCAGGCCGATGGAG ACCAGATCACGTTGACGCGGGTGATCCCCGGCACCTACACCCTCACGTATACCCTGCTCACCGATCAGCCCGCCGACCGT GTGGTGACGATTCCCGACCTGTCTTGGTAA
Upstream 100 bases:
>100_bases TTGCTCCTCAGGGCGGATTCAGAAATCAAGGCCTGCGCACGTGCCTGCATCTCCTGCATGGTAGCGGGCGGGTCGGGGGG TATTCTGGCGGGCGGTGACC
Downstream 100 bases:
>100_bases GGGGTTCGTGTGGGCCGTTGCCCTACATCTTCACCTCATATTGTCAGCCAAACTGCCCCCGACGGGTGGTCTTTGGGCTA CTCTTTTTCTATGAGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MRAAPFPLHLPRTALLTLAALLGSGALAQTGGILPLVSVGEKWPQAQETYLIRVSPQDAGKPLGLEVYSPTFNLADYVDG RRGAGYFGDELYKKNEPFETTFTLSGPGGTVVERRFSANREHTWESLYSGGLPAGTYTLRVSSRGDGKNSFALRTAAPFV LETSDFSVNARDTEQVPLLAARLNVPAEWVGRTLSVLNYDVDGPQEAETWVVQPGGKRVNLTPSDNGKSATDRFLITPDL VGEWQVFLRVLPTTRQYSNAIRYSFRLEGQPVTARVGGFTPPEGLKMTNQLLVDVVDPQGRPIPGASYTLLGDSLVRPSL PPGYIPVSSAIVSGTGNVVSPTEIRYQPGYTRLRFVARPAQGQLSVDAVAVYGDQRLPLTGIPFEVSGHTFNTPATVPLA PGDYTVTPSSMPGSTVTPPPPAHVSDAGTGRITLEYRVQSELTLSAAPDIVNACDVTQLTATARTDFPQRLPARLRLELP AGWSSDYPLEVPGEISSGSPLRLKVPVRVCRSDTAEAVLDPLDLRTTGQARVRNPGGANVTRTVQGGARATLSKSVEAAP QGYLVTLTLTVDRTLENVRLLDPLPSGGSTSAVRGPLNVQGPSLAGVAAQADGDQITLTRVIPGTYTLTYTLLTDQPADR VVTIPDLSW
Sequences:
>Translated_649_residues MRAAPFPLHLPRTALLTLAALLGSGALAQTGGILPLVSVGEKWPQAQETYLIRVSPQDAGKPLGLEVYSPTFNLADYVDG RRGAGYFGDELYKKNEPFETTFTLSGPGGTVVERRFSANREHTWESLYSGGLPAGTYTLRVSSRGDGKNSFALRTAAPFV LETSDFSVNARDTEQVPLLAARLNVPAEWVGRTLSVLNYDVDGPQEAETWVVQPGGKRVNLTPSDNGKSATDRFLITPDL VGEWQVFLRVLPTTRQYSNAIRYSFRLEGQPVTARVGGFTPPEGLKMTNQLLVDVVDPQGRPIPGASYTLLGDSLVRPSL PPGYIPVSSAIVSGTGNVVSPTEIRYQPGYTRLRFVARPAQGQLSVDAVAVYGDQRLPLTGIPFEVSGHTFNTPATVPLA PGDYTVTPSSMPGSTVTPPPPAHVSDAGTGRITLEYRVQSELTLSAAPDIVNACDVTQLTATARTDFPQRLPARLRLELP AGWSSDYPLEVPGEISSGSPLRLKVPVRVCRSDTAEAVLDPLDLRTTGQARVRNPGGANVTRTVQGGARATLSKSVEAAP QGYLVTLTLTVDRTLENVRLLDPLPSGGSTSAVRGPLNVQGPSLAGVAAQADGDQITLTRVIPGTYTLTYTLLTDQPADR VVTIPDLSW >Mature_649_residues MRAAPFPLHLPRTALLTLAALLGSGALAQTGGILPLVSVGEKWPQAQETYLIRVSPQDAGKPLGLEVYSPTFNLADYVDG RRGAGYFGDELYKKNEPFETTFTLSGPGGTVVERRFSANREHTWESLYSGGLPAGTYTLRVSSRGDGKNSFALRTAAPFV LETSDFSVNARDTEQVPLLAARLNVPAEWVGRTLSVLNYDVDGPQEAETWVVQPGGKRVNLTPSDNGKSATDRFLITPDL VGEWQVFLRVLPTTRQYSNAIRYSFRLEGQPVTARVGGFTPPEGLKMTNQLLVDVVDPQGRPIPGASYTLLGDSLVRPSL PPGYIPVSSAIVSGTGNVVSPTEIRYQPGYTRLRFVARPAQGQLSVDAVAVYGDQRLPLTGIPFEVSGHTFNTPATVPLA PGDYTVTPSSMPGSTVTPPPPAHVSDAGTGRITLEYRVQSELTLSAAPDIVNACDVTQLTATARTDFPQRLPARLRLELP AGWSSDYPLEVPGEISSGSPLRLKVPVRVCRSDTAEAVLDPLDLRTTGQARVRNPGGANVTRTVQGGARATLSKSVEAAP QGYLVTLTLTVDRTLENVRLLDPLPSGGSTSAVRGPLNVQGPSLAGVAAQADGDQITLTRVIPGTYTLTYTLLTDQPADR VVTIPDLSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69328; Mature: 69328
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAPFPLHLPRTALLTLAALLGSGALAQTGGILPLVSVGEKWPQAQETYLIRVSPQDAG CCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCC KPLGLEVYSPTFNLADYVDGRRGAGYFGDELYKKNEPFETTFTLSGPGGTVVERRFSANR CCCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCEEHHHHCCCC EHTWESLYSGGLPAGTYTLRVSSRGDGKNSFALRTAAPFVLETSDFSVNARDTEQVPLLA HHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEECCCCEECCCCCCCCCEEE ARLNVPAEWVGRTLSVLNYDVDGPQEAETWVVQPGGKRVNLTPSDNGKSATDRFLITPDL EECCCCHHHHCCEEEEEEECCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCEEEECCCC VGEWQVFLRVLPTTRQYSNAIRYSFRLEGQPVTARVGGFTPPEGLKMTNQLLVDVVDPQG CCCCEEEEECCCCCHHHCCEEEEEEEECCCCEEEEECCCCCCCCCHHCCEEEEEEECCCC RPIPGASYTLLGDSLVRPSLPPGYIPVSSAIVSGTGNVVSPTEIRYQPGYTRLRFVARPA CCCCCCCEEEECCHHCCCCCCCCCEECCCEEEECCCCCCCCCEEEECCCCEEEEEEECCC QGQLSVDAVAVYGDQRLPLTGIPFEVSGHTFNTPATVPLAPGDYTVTPSSMPGSTVTPPP CCCEEEEEEEEECCCCCCEECCCEEECCCEECCCCEEEECCCCEEECCCCCCCCCCCCCC PAHVSDAGTGRITLEYRVQSELTLSAAPDIVNACDVTQLTATARTDFPQRLPARLRLELP CCCCCCCCCCEEEEEEEECCCEEEECCCCHHCCCCCEEEEEHHCCCCHHHCCCEEEEEEC AGWSSDYPLEVPGEISSGSPLRLKVPVRVCRSDTAEAVLDPLDLRTTGQARVRNPGGANV CCCCCCCCEECCCCCCCCCCEEEECCHHECCCCCHHHHHCCCCCCCCCCEEECCCCCCCE TRTVQGGARATLSKSVEAAPQGYLVTLTLTVDRTLENVRLLDPLPSGGSTSAVRGPLNVQ EEEECCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCEEECCCCCC GPSLAGVAAQADGDQITLTRVIPGTYTLTYTLLTDQPADRVVTIPDLSW CCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEECCCCCCEEECCCCCC >Mature Secondary Structure MRAAPFPLHLPRTALLTLAALLGSGALAQTGGILPLVSVGEKWPQAQETYLIRVSPQDAG CCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCC KPLGLEVYSPTFNLADYVDGRRGAGYFGDELYKKNEPFETTFTLSGPGGTVVERRFSANR CCCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCEEHHHHCCCC EHTWESLYSGGLPAGTYTLRVSSRGDGKNSFALRTAAPFVLETSDFSVNARDTEQVPLLA HHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEECCCCEECCCCCCCCCEEE ARLNVPAEWVGRTLSVLNYDVDGPQEAETWVVQPGGKRVNLTPSDNGKSATDRFLITPDL EECCCCHHHHCCEEEEEEECCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCEEEECCCC VGEWQVFLRVLPTTRQYSNAIRYSFRLEGQPVTARVGGFTPPEGLKMTNQLLVDVVDPQG CCCCEEEEECCCCCHHHCCEEEEEEEECCCCEEEEECCCCCCCCCHHCCEEEEEEECCCC RPIPGASYTLLGDSLVRPSLPPGYIPVSSAIVSGTGNVVSPTEIRYQPGYTRLRFVARPA CCCCCCCEEEECCHHCCCCCCCCCEECCCEEEECCCCCCCCCEEEECCCCEEEEEEECCC QGQLSVDAVAVYGDQRLPLTGIPFEVSGHTFNTPATVPLAPGDYTVTPSSMPGSTVTPPP CCCEEEEEEEEECCCCCCEECCCEEECCCEECCCCEEEECCCCEEECCCCCCCCCCCCCC PAHVSDAGTGRITLEYRVQSELTLSAAPDIVNACDVTQLTATARTDFPQRLPARLRLELP CCCCCCCCCCEEEEEEEECCCEEEECCCCHHCCCCCEEEEEHHCCCCHHHCCCEEEEEEC AGWSSDYPLEVPGEISSGSPLRLKVPVRVCRSDTAEAVLDPLDLRTTGQARVRNPGGANV CCCCCCCCEECCCCCCCCCCEEEECCHHECCCCCHHHHHCCCCCCCCCCEEECCCCCCCE TRTVQGGARATLSKSVEAAPQGYLVTLTLTVDRTLENVRLLDPLPSGGSTSAVRGPLNVQ EEEECCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCEEECCCCCC GPSLAGVAAQADGDQITLTRVIPGTYTLTYTLLTDQPADRVVTIPDLSW CCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEECCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA