| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is cbiG [H]
Identifier: 94971825
GI number: 94971825
Start: 132826
End: 133620
Strand: Direct
Name: cbiG [H]
Synonym: Dgeo_2356
Alternate gene names: 94971825
Gene position: 132826-133620 (Clockwise)
Preceding gene: 94971826
Following gene: 94971824
Centisome position: 23.14
GC content: 72.83
Gene sequence:
>795_bases GTGACGGCAGCCGGTGAGCTGGCGGTGTGGCCCGTGCGCCGCGACTCGGAGGCCCTGGCCGGGCGGTTGGCGCTGAGCTT GGACGCGGCCCTCTACCGGCCTTGGGAGGGGACCGAAAGCCAGAAGAACCGTCGGCAGATGGACGCGTTCCGCGCTGCCT TTCCTACGGCCCGCGCCTGGGTCCTGATCGGTGCGGCGGGGATCGCCACCCGCTTTCTCGCGGGGCTGCCCCGCAGCAAG CTCAGCGACCCGGCGGTGGTGGTGCTGGACGACGCGGCCCGCTTCGCCGTCGCGCTGCTGGGCGGGCATGAGGGCGGAGC CAACCGCCTTGCCTACCGGGTGGCCCGCCTGACCGGGGCGGTCCCCGTCGTGACCACGGGGACAGAGGCCGTCAAACCCC TCACCCTGGGCATCGGCTGTCGCCGGGGGGTGAGCGAGGCGCAGATTGCCGCGGCCGTGGCCCATGCTCTGGGCGGACGC TCCCTCACCGAGGTGCGCGAGGTGGCGACGGTAGACCTCAAGGCGAAGGAGGCGGGCCTGCTGGCCTTCTGCGAGCGCCA TGATCTGCCGCTGCGGATTTTTGCCGCCGCTGACCTGGAGGCCCGGCCCTTTGTGACCCAGTCCAGCGCCTGGGTACAGC AGAACGTGGGACTGAGCGGCGTCTGCGAACCCTGCGCCCTGCTCGCCAGCCCGCGCGGACGGCTCATCGTGCCCAAGACC GCGCTGAACGGCGTGGCCGTCGCCGCCGTGGAGGACCGGGGCGCGTGGGCGGCTCCCCAGGAGGAACAGCCATGA
Upstream 100 bases:
>100_bases GCCCGGCGCTGGGGAGCGTGGAGGAACTGGAGACCTTCAGTCGTCTCTATGACCCCGCCTACGCCCACCGCTTTCGCCGC GCGGAGAAGGGCGGTGAGGC
Downstream 100 bases:
>100_bases CTGGACACCTCAGTCTTGTGTCCGTGGGGCCGGGCGACCTGTCCCTGGTGCCGGAGCGTGCCCGGCAGGCGCTGCAAGCT GCCGAGGTCATCGTCGCCTA
Product: cobalamin biosynthesis protein CbiG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTAAGELAVWPVRRDSEALAGRLALSLDAALYRPWEGTESQKNRRQMDAFRAAFPTARAWVLIGAAGIATRFLAGLPRSK LSDPAVVVLDDAARFAVALLGGHEGGANRLAYRVARLTGAVPVVTTGTEAVKPLTLGIGCRRGVSEAQIAAAVAHALGGR SLTEVREVATVDLKAKEAGLLAFCERHDLPLRIFAAADLEARPFVTQSSAWVQQNVGLSGVCEPCALLASPRGRLIVPKT ALNGVAVAAVEDRGAWAAPQEEQP
Sequences:
>Translated_264_residues MTAAGELAVWPVRRDSEALAGRLALSLDAALYRPWEGTESQKNRRQMDAFRAAFPTARAWVLIGAAGIATRFLAGLPRSK LSDPAVVVLDDAARFAVALLGGHEGGANRLAYRVARLTGAVPVVTTGTEAVKPLTLGIGCRRGVSEAQIAAAVAHALGGR SLTEVREVATVDLKAKEAGLLAFCERHDLPLRIFAAADLEARPFVTQSSAWVQQNVGLSGVCEPCALLASPRGRLIVPKT ALNGVAVAAVEDRGAWAAPQEEQP >Mature_263_residues TAAGELAVWPVRRDSEALAGRLALSLDAALYRPWEGTESQKNRRQMDAFRAAFPTARAWVLIGAAGIATRFLAGLPRSKL SDPAVVVLDDAARFAVALLGGHEGGANRLAYRVARLTGAVPVVTTGTEAVKPLTLGIGCRRGVSEAQIAAAVAHALGGRS LTEVREVATVDLKAKEAGLLAFCERHDLPLRIFAAADLEARPFVTQSSAWVQQNVGLSGVCEPCALLASPRGRLIVPKTA LNGVAVAAVEDRGAWAAPQEEQP
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021745 - InterPro: IPR021744 - InterPro: IPR002750 [H]
Pfam domain/function: PF01890 CbiG; PF11761 CbiG_mid; PF11760 CbiG_N [H]
EC number: NA
Molecular weight: Translated: 27729; Mature: 27598
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAGELAVWPVRRDSEALAGRLALSLDAALYRPWEGTESQKNRRQMDAFRAAFPTARAW CCCCCCEEEEECCCCHHHHHHHHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEE VLIGAAGIATRFLAGLPRSKLSDPAVVVLDDAARFAVALLGGHEGGANRLAYRVARLTGA EEEEHHHHHHHHHHCCCCCCCCCCEEEEEECHHHEEEEEECCCCCCHHHHHHHHHHHHCC VPVVTTGTEAVKPLTLGIGCRRGVSEAQIAAAVAHALGGRSLTEVREVATVDLKAKEAGL CEEEECCCHHHCEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCH LAFCERHDLPLRIFAAADLEARPFVTQSSAWVQQNVGLSGVCEPCALLASPRGRLIVPKT HEEHHCCCCCEEEEEECCCCCCCCEECCCHHHHHCCCCCCCCHHHHHHCCCCCCEEEECC ALNGVAVAAVEDRGAWAAPQEEQP CCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TAAGELAVWPVRRDSEALAGRLALSLDAALYRPWEGTESQKNRRQMDAFRAAFPTARAW CCCCCEEEEECCCCHHHHHHHHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEE VLIGAAGIATRFLAGLPRSKLSDPAVVVLDDAARFAVALLGGHEGGANRLAYRVARLTGA EEEEHHHHHHHHHHCCCCCCCCCCEEEEEECHHHEEEEEECCCCCCHHHHHHHHHHHHCC VPVVTTGTEAVKPLTLGIGCRRGVSEAQIAAAVAHALGGRSLTEVREVATVDLKAKEAGL CEEEECCCHHHCEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCH LAFCERHDLPLRIFAAADLEARPFVTQSSAWVQQNVGLSGVCEPCALLASPRGRLIVPKT HEEHHCCCCCEEEEEECCCCCCCCEECCCHHHHHCCCCCCCCHHHHHHCCCCCCEEEECC ALNGVAVAAVEDRGAWAAPQEEQP CCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]