Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
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Accession | NC_007974 |
Length | 2,580,084 |
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The map label for this gene is 94312704
Identifier: 94312704
GI number: 94312704
Start: 309514
End: 311229
Strand: Direct
Name: 94312704
Synonym: Rmet_3774
Alternate gene names: NA
Gene position: 309514-311229 (Clockwise)
Preceding gene: 94312703
Following gene: 94312706
Centisome position: 12.0
GC content: 55.01
Gene sequence:
>1716_bases ATGAACGTATTCGTATCTCCTCTGTATGAAGATGAGCTGCTGTACAGCCATTGCGTACGGTATCTGTCGGAATTTCCCAT GGTTTGGCGCAACAAGCTCATGCTTGATATGTTCGGCGCGGAGTTGCATCTGTCGCCGCATTTGCCGAGGAACCTGCAAG AGTTTTCTGAGCGAACCGCGATATCCCTTTCGATGACAAAGGAAGAAATATTCTGGCGGCACTCAATGTATCCATTCCTT TGCGCGTACTTCCCTGAAAAGTCGCGGACGTTCGCAATGGATTACGCGTACTACGGACATGAGAACAGGCCGATGCTGGC GGTCCTTCGTGGTGTTTTTCCTCCTAGATTCATGCGGTGGTGCCCGGATTGCGTGACAGAGGATCGTGCCCGTCCTGAAT GTGGCGAGGCGTACTGGCGCCGGGCCCACCAACTTCCCGGTGTCTGGCAATGTGAGAAACATCGGTGTGACCTTATCGAT TCGGCGATTCCGCGGGCTTCGTCGTCGGAACCGTTTCGTGCGGCTGATGTTGTCATTCCGGAGGATGCCCATCGTTTTCG AGCGAAGCGCAACTGCAGCTCGATGGAAGCAATGCTGAGAACGCGTTTGGTAGGGCTACTGAACAGCGGCGACTTTGCGT ATCGACCAGAGCATCCCAATTTCAGGGAAGCCGCCGCACGAAGCGGCTTCGAGACGGCTGGGAAGATTGACTATCCGAAG CTGTATGAGGCGTTTTCTGGGTATTGGGGGGATGTGCTCGATCGCATCGATAGTCAACATCTTCGTACGAAAGTCGTCGG CACAGGCTGGCTTCGTCGCCAGTTCACCAAGAAGGAAGTTATCTACCAACCGGTTGGCCGGGAGATGCTTGACATCTTCT TTCAAGACCGATTCGGTATTGATCTCAATGAGCTGCCTATGGAGATACCCGGCCGGCGCCGTCCGCCCGTTTTCTATTGC CCCAATCCGTATGCTGAACATGGGGCAGAGACTCCGGTCAGGAAGTCGATTCGGCGTCCGAGTATGCCTGGCGTGGCAAG CCTTTCGTGCGAGTGCGGATTCACGGCATTGGTGCCGGAGACCAGTGCGGAGCAAGCGATCGGCTTGGCCGACGTTATCA AGGTGACAAGATATGGACCGTCTTGGGTTAAGGAGTGCTTAAAGTTGCGTGCAGAGGGCAAGACGCTGGATGAGGTTGCG GCAGCGCTCGGGGTTAAGTATCAGGCGGCGTTCGACTGGTCGCGCGAAGGGGGGCCGAAATATAGCCCGATGTCTTCAGA GCAGAGCGAAGCTCGCAGGGCAGAATGGGTGGCAATTCTCGAGAAAATCGCGCCCGGCCCGCCGAAGTTGGCGACCAAGA GGTACCCCAGCTTGCACATTCGACTTCTGAGTGAGGACAGGGAGTGGTTTCAAGAGACGATGAAAGCGTATCGACAAAAA TACGGTCATTCGCAAAAGAGAGCCAATTGGCCTGCACGCGATGAGGAGTACACAGAGGCCGTTGTAGCGGCGGCAGCAAG ATTGCAAAGAATGGACGGAGCGGAATGTCCGACAGTCAGTGCACTATTAAAGGAGGCGGCGCTCGAATTCAGCTACTTCT CAAAGGGTTCCATACGTCACTTTCCCAAAACCATAGCGACTTTGACTCGTCTTAGTGGGAAGCCGTGGAGCACCTTCTCG CCATACCTTGATGGGGGCAAGGAAGCTGAAGGCTAA
Upstream 100 bases:
>100_bases AGCTCAATCTACCAGAGAACACAGCGCGCTACTTGTGGCGCCAGAGTAAGCCTTTGCTTGCGGCGGATGAGAAGACGCTC AAGAAACAGGAGTCTGCGAA
Downstream 100 bases:
>100_bases GTGTTCGATGTAGCGTCGGAGGTCAGGCCGGCGCAGCTGGAAAGGGCCGTTCATGGGAGCGGCCCTTCTGTGGCGTAAGC GTTGAGCATCCCGGAAGCAG
Product: putative transposon transposition protein
Products: NA
Alternate protein names: Tn7-Like Transposition Protein; Tn7-Like Protein Transposition Protein D; Transposon Tn7 Transposition Protein TnsD; Transposon Transposition Protein
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MNVFVSPLYEDELLYSHCVRYLSEFPMVWRNKLMLDMFGAELHLSPHLPRNLQEFSERTAISLSMTKEEIFWRHSMYPFL CAYFPEKSRTFAMDYAYYGHENRPMLAVLRGVFPPRFMRWCPDCVTEDRARPECGEAYWRRAHQLPGVWQCEKHRCDLID SAIPRASSSEPFRAADVVIPEDAHRFRAKRNCSSMEAMLRTRLVGLLNSGDFAYRPEHPNFREAAARSGFETAGKIDYPK LYEAFSGYWGDVLDRIDSQHLRTKVVGTGWLRRQFTKKEVIYQPVGREMLDIFFQDRFGIDLNELPMEIPGRRRPPVFYC PNPYAEHGAETPVRKSIRRPSMPGVASLSCECGFTALVPETSAEQAIGLADVIKVTRYGPSWVKECLKLRAEGKTLDEVA AALGVKYQAAFDWSREGGPKYSPMSSEQSEARRAEWVAILEKIAPGPPKLATKRYPSLHIRLLSEDREWFQETMKAYRQK YGHSQKRANWPARDEEYTEAVVAAAARLQRMDGAECPTVSALLKEAALEFSYFSKGSIRHFPKTIATLTRLSGKPWSTFS PYLDGGKEAEG
Sequences:
>Translated_571_residues MNVFVSPLYEDELLYSHCVRYLSEFPMVWRNKLMLDMFGAELHLSPHLPRNLQEFSERTAISLSMTKEEIFWRHSMYPFL CAYFPEKSRTFAMDYAYYGHENRPMLAVLRGVFPPRFMRWCPDCVTEDRARPECGEAYWRRAHQLPGVWQCEKHRCDLID SAIPRASSSEPFRAADVVIPEDAHRFRAKRNCSSMEAMLRTRLVGLLNSGDFAYRPEHPNFREAAARSGFETAGKIDYPK LYEAFSGYWGDVLDRIDSQHLRTKVVGTGWLRRQFTKKEVIYQPVGREMLDIFFQDRFGIDLNELPMEIPGRRRPPVFYC PNPYAEHGAETPVRKSIRRPSMPGVASLSCECGFTALVPETSAEQAIGLADVIKVTRYGPSWVKECLKLRAEGKTLDEVA AALGVKYQAAFDWSREGGPKYSPMSSEQSEARRAEWVAILEKIAPGPPKLATKRYPSLHIRLLSEDREWFQETMKAYRQK YGHSQKRANWPARDEEYTEAVVAAAARLQRMDGAECPTVSALLKEAALEFSYFSKGSIRHFPKTIATLTRLSGKPWSTFS PYLDGGKEAEG >Mature_571_residues MNVFVSPLYEDELLYSHCVRYLSEFPMVWRNKLMLDMFGAELHLSPHLPRNLQEFSERTAISLSMTKEEIFWRHSMYPFL CAYFPEKSRTFAMDYAYYGHENRPMLAVLRGVFPPRFMRWCPDCVTEDRARPECGEAYWRRAHQLPGVWQCEKHRCDLID SAIPRASSSEPFRAADVVIPEDAHRFRAKRNCSSMEAMLRTRLVGLLNSGDFAYRPEHPNFREAAARSGFETAGKIDYPK LYEAFSGYWGDVLDRIDSQHLRTKVVGTGWLRRQFTKKEVIYQPVGREMLDIFFQDRFGIDLNELPMEIPGRRRPPVFYC PNPYAEHGAETPVRKSIRRPSMPGVASLSCECGFTALVPETSAEQAIGLADVIKVTRYGPSWVKECLKLRAEGKTLDEVA AALGVKYQAAFDWSREGGPKYSPMSSEQSEARRAEWVAILEKIAPGPPKLATKRYPSLHIRLLSEDREWFQETMKAYRQK YGHSQKRANWPARDEEYTEAVVAAAARLQRMDGAECPTVSALLKEAALEFSYFSKGSIRHFPKTIATLTRLSGKPWSTFS PYLDGGKEAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65505; Mature: 65505
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFVSPLYEDELLYSHCVRYLSEFPMVWRNKLMLDMFGAELHLSPHLPRNLQEFSERTA CCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHE ISLSMTKEEIFWRHSMYPFLCAYFPEKSRTFAMDYAYYGHENRPMLAVLRGVFPPRFMRW EEEEEHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEHEECCCCCHHHHHHHHCCCHHHHHH CPDCVTEDRARPECGEAYWRRAHQLPGVWQCEKHRCDLIDSAIPRASSSEPFRAADVVIP CHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECEECC EDAHRFRAKRNCSSMEAMLRTRLVGLLNSGDFAYRPEHPNFREAAARSGFETAGKIDYPK CHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHH LYEAFSGYWGDVLDRIDSQHLRTKVVGTGWLRRQFTKKEVIYQPVGREMLDIFFQDRFGI HHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC DLNELPMEIPGRRRPPVFYCPNPYAEHGAETPVRKSIRRPSMPGVASLSCECGFTALVPE CHHHCCCCCCCCCCCCEEECCCCHHHCCCCCHHHHHHCCCCCCCCCEEECCCCCEEECCC TSAEQAIGLADVIKVTRYGPSWVKECLKLRAEGKTLDEVAAALGVKYQAAFDWSREGGPK CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHEEECCCCCCCCC YSPMSSEQSEARRAEWVAILEKIAPGPPKLATKRYPSLHIRLLSEDREWFQETMKAYRQK CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHH YGHSQKRANWPARDEEYTEAVVAAAARLQRMDGAECPTVSALLKEAALEFSYFSKGSIRH HCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH FPKTIATLTRLSGKPWSTFSPYLDGGKEAEG HHHHHHHHHHHCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MNVFVSPLYEDELLYSHCVRYLSEFPMVWRNKLMLDMFGAELHLSPHLPRNLQEFSERTA CCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHE ISLSMTKEEIFWRHSMYPFLCAYFPEKSRTFAMDYAYYGHENRPMLAVLRGVFPPRFMRW EEEEEHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEHEECCCCCHHHHHHHHCCCHHHHHH CPDCVTEDRARPECGEAYWRRAHQLPGVWQCEKHRCDLIDSAIPRASSSEPFRAADVVIP CHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECEECC EDAHRFRAKRNCSSMEAMLRTRLVGLLNSGDFAYRPEHPNFREAAARSGFETAGKIDYPK CHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHH LYEAFSGYWGDVLDRIDSQHLRTKVVGTGWLRRQFTKKEVIYQPVGREMLDIFFQDRFGI HHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC DLNELPMEIPGRRRPPVFYCPNPYAEHGAETPVRKSIRRPSMPGVASLSCECGFTALVPE CHHHCCCCCCCCCCCCEEECCCCHHHCCCCCHHHHHHCCCCCCCCCEEECCCCCEEECCC TSAEQAIGLADVIKVTRYGPSWVKECLKLRAEGKTLDEVAAALGVKYQAAFDWSREGGPK CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHEEECCCCCCCCC YSPMSSEQSEARRAEWVAILEKIAPGPPKLATKRYPSLHIRLLSEDREWFQETMKAYRQK CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHH YGHSQKRANWPARDEEYTEAVVAAAARLQRMDGAECPTVSALLKEAALEFSYFSKGSIRH HCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH FPKTIATLTRLSGKPWSTFSPYLDGGKEAEG HHHHHHHHHHHCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA