Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
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Accession | NC_007974 |
Length | 2,580,084 |
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The map label for this gene is 94312706
Identifier: 94312706
GI number: 94312706
Start: 311904
End: 313091
Strand: Direct
Name: 94312706
Synonym: Rmet_3776
Alternate gene names: NA
Gene position: 311904-313091 (Clockwise)
Preceding gene: 94312704
Following gene: 94312707
Centisome position: 12.09
GC content: 62.37
Gene sequence:
>1188_bases ATGGATCGCCCCTATCAGATGGTGCCCTATGCATTGGGCACGGCCGATGGGCAGCGCACGCTCGGCTTTCTGTTCAGCCT CACTGGCAAGGAAAAGACGGTTGTATCCCTGATGCACCCGCGCGAAATGGCCATCACCCACTATCTGGTGCCGTTCGTGC TCGATGCCGGATGTGCTTGCTGGGTGCAGGGCCCACGCTCGATCGGCAACGACCTGCGTCTGGAGCATGAGATCGCGCTG TTCGATGTCGCAGCCGGTATGACGCACCTGCGCGATCTTGGTTATGAAAAGATCGTGCTGCTCGGCAATTCGGGCGGCGC GGGGTTGTACACGTTCTACAACCAGCAGTCGTTGACGCCCCGTGAAATGCGTATTGCCCGGACGCCGGGTGGCCGCCCGA CGAACCTGGGTGAACTGCATATGCCGGAAGTCGATGCGTTCATCCTTGTGTCGCCCCACCCGGGGCAGGGCAAACTCCTG ATGAGCGGCATTGACCCGTCGGTCGCTGATGAAGACGATCCCATGCAGACGGACCCGAGGCTCGATCCGTTTTCAAAGGC CAACGGATTCGATGTGGAATCCGGCAAGGGCAGATACGCGCCCGACTTCATCGAACGATATCGCGCTGCACAGACCGAAC GCGTTGCACGCATCGACGCACGCGCCAGGGCAATGCTTCGGGCCAAGCAGGAGGCGCGGCAGAAAGTGAAGGCCGGCGCG GGCACCGATTCCGACCGTCGGCTCGCAGCCCATGCACCGATCTTCGAGGTCTGGCGTACCGACGCCGACCTGCGCTCATG GGACATCTCGCTGGACCCGTCCGACCGCAAGACCGGTTCGCTCTGGGGCAAGGATCCCTTCGTGTCCAACTGGGGAAGTG TGGGTTTCGGACGTGTCGTCACGCCGGAATCCTGGCTCTCCACGTGGTCGGGGCTGTCATCCAACGCGGCGCTGGACAAG ACGATCGGCACGTTGCATCAGCCCACGCTGCTGCTCGAATACACCGGCGATCAATGCACGTTTCCGGCGGATATCCAGGC CATCTACGATCAGATCCCGGCGGCGCATAAGCAGCACATTCGTGTGCGCGGCAACCACCACGGCATGGCGTTGAGCCGCG AGGAGGAGCCCGGGCAGCGCATTGCAGGACGTCATATCGTCGAATGGCTGCGGGAATCGATGGCCTGA
Upstream 100 bases:
>100_bases TTATTGAGACGGTCGCATTTACGAAGGAGACAGCGTGAGCGAACAAGACAAGCCGCAAGTGACGGCAGGAATGCGAGGTG CCTCATGGGACGCCCGGCTG
Downstream 100 bases:
>100_bases GCGGCACCGCGGCCGAACTATATAACTACAGAGGTAGACAACGATGCTGCAACCCACCCACGTACGCCCATCCGTGTTGC TCGATGGCGTGCGCTATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MDRPYQMVPYALGTADGQRTLGFLFSLTGKEKTVVSLMHPREMAITHYLVPFVLDAGCACWVQGPRSIGNDLRLEHEIAL FDVAAGMTHLRDLGYEKIVLLGNSGGAGLYTFYNQQSLTPREMRIARTPGGRPTNLGELHMPEVDAFILVSPHPGQGKLL MSGIDPSVADEDDPMQTDPRLDPFSKANGFDVESGKGRYAPDFIERYRAAQTERVARIDARARAMLRAKQEARQKVKAGA GTDSDRRLAAHAPIFEVWRTDADLRSWDISLDPSDRKTGSLWGKDPFVSNWGSVGFGRVVTPESWLSTWSGLSSNAALDK TIGTLHQPTLLLEYTGDQCTFPADIQAIYDQIPAAHKQHIRVRGNHHGMALSREEEPGQRIAGRHIVEWLRESMA
Sequences:
>Translated_395_residues MDRPYQMVPYALGTADGQRTLGFLFSLTGKEKTVVSLMHPREMAITHYLVPFVLDAGCACWVQGPRSIGNDLRLEHEIAL FDVAAGMTHLRDLGYEKIVLLGNSGGAGLYTFYNQQSLTPREMRIARTPGGRPTNLGELHMPEVDAFILVSPHPGQGKLL MSGIDPSVADEDDPMQTDPRLDPFSKANGFDVESGKGRYAPDFIERYRAAQTERVARIDARARAMLRAKQEARQKVKAGA GTDSDRRLAAHAPIFEVWRTDADLRSWDISLDPSDRKTGSLWGKDPFVSNWGSVGFGRVVTPESWLSTWSGLSSNAALDK TIGTLHQPTLLLEYTGDQCTFPADIQAIYDQIPAAHKQHIRVRGNHHGMALSREEEPGQRIAGRHIVEWLRESMA >Mature_395_residues MDRPYQMVPYALGTADGQRTLGFLFSLTGKEKTVVSLMHPREMAITHYLVPFVLDAGCACWVQGPRSIGNDLRLEHEIAL FDVAAGMTHLRDLGYEKIVLLGNSGGAGLYTFYNQQSLTPREMRIARTPGGRPTNLGELHMPEVDAFILVSPHPGQGKLL MSGIDPSVADEDDPMQTDPRLDPFSKANGFDVESGKGRYAPDFIERYRAAQTERVARIDARARAMLRAKQEARQKVKAGA GTDSDRRLAAHAPIFEVWRTDADLRSWDISLDPSDRKTGSLWGKDPFVSNWGSVGFGRVVTPESWLSTWSGLSSNAALDK TIGTLHQPTLLLEYTGDQCTFPADIQAIYDQIPAAHKQHIRVRGNHHGMALSREEEPGQRIAGRHIVEWLRESMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43802; Mature: 43802
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPYQMVPYALGTADGQRTLGFLFSLTGKEKTVVSLMHPREMAITHYLVPFVLDAGCAC CCCCCCCCCEEECCCCCHHHEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEE WVQGPRSIGNDLRLEHEIALFDVAAGMTHLRDLGYEKIVLLGNSGGAGLYTFYNQQSLTP EECCCHHCCCCCEEEHHEEEHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCH REMRIARTPGGRPTNLGELHMPEVDAFILVSPHPGQGKLLMSGIDPSVADEDDPMQTDPR HHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCC LDPFSKANGFDVESGKGRYAPDFIERYRAAQTERVARIDARARAMLRAKQEARQKVKAGA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GTDSDRRLAAHAPIFEVWRTDADLRSWDISLDPSDRKTGSLWGKDPFVSNWGSVGFGRVV CCCCCCEEECCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEE TPESWLSTWSGLSSNAALDKTIGTLHQPTLLLEYTGDQCTFPADIQAIYDQIPAAHKQHI CCHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEE RVRGNHHGMALSREEEPGQRIAGRHIVEWLRESMA EEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDRPYQMVPYALGTADGQRTLGFLFSLTGKEKTVVSLMHPREMAITHYLVPFVLDAGCAC CCCCCCCCCEEECCCCCHHHEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEE WVQGPRSIGNDLRLEHEIALFDVAAGMTHLRDLGYEKIVLLGNSGGAGLYTFYNQQSLTP EECCCHHCCCCCEEEHHEEEHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCH REMRIARTPGGRPTNLGELHMPEVDAFILVSPHPGQGKLLMSGIDPSVADEDDPMQTDPR HHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCC LDPFSKANGFDVESGKGRYAPDFIERYRAAQTERVARIDARARAMLRAKQEARQKVKAGA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GTDSDRRLAAHAPIFEVWRTDADLRSWDISLDPSDRKTGSLWGKDPFVSNWGSVGFGRVV CCCCCCEEECCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEE TPESWLSTWSGLSSNAALDKTIGTLHQPTLLLEYTGDQCTFPADIQAIYDQIPAAHKQHI CCHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEE RVRGNHHGMALSREEEPGQRIAGRHIVEWLRESMA EEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA