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The map label for this gene is yfhM [H]

Identifier: 94310783

GI number: 94310783

Start: 1999068

End: 1999988

Strand: Reverse

Name: yfhM [H]

Synonym: Rmet_1845

Alternate gene names: 94310783

Gene position: 1999988-1999068 (Counterclockwise)

Preceding gene: 94310784

Following gene: 94310781

Centisome position: 50.92

GC content: 65.04

Gene sequence:

>921_bases
ATGACCGCACCCGCCGTGATCCACCACAGGCAGTTTGCGAACCTGCCCAACGGCACGCGCTTGCATTACGCGAGTGCGGG
CGAGCAGGGCAGGCCGCTGATCCTGTTCGTGCACGGCTTTCCGGAGTTCTGGTACGAGTGGGAAAACCAGCTCGCAGAGT
TCGGCCAGACGCATTTTGCGGTCGCGCCGGACCTGCGCGGGTTCAATCTGTCCAGCAAGCCGGCCGATGTGGCAGCGTAC
AAGCCCAAGCATCTGGTCGAGGATCTGGTGCAGTTCATCCGCGTGCTGGGCTATGAGCGGTGCGTCATCGTCGCGCATGA
CTGGGGCGGCGCGCTCTGCTGGAACCTGGCGGCGCAGTTCCCGGAAGCGGTCGAGCGGCTCGTGATCATCAACTCGCCGC
ATCCCTATGTGTTCGCGCGGGCGTTGGCGAGTGACCCGGCACAGCAGCAGGCCTCGGCCTATATGAACTGGCTGCGCAAG
CCGGGTTCAGAACAGGCCATGGCCGCCAACGACTTCGCATTGCTGGAAAAGATGCTGACCGGCGATGCCTCCACGGTGCC
GGCGTGGTTCGTGGGTGAGACTCGCGCGAAGTATCACGCGGCGTGGTCACAACCGGGCGATGGCGGCTCGCATTCGCTGA
CGGGCGGTGTCAATTACTACCGGGCATCGCCGATGCACCCGCCCTTGCCGGGAGAACCGGCGCCCGACATCTCGCGCCTC
GATCCATCCGCGTACATCGTGCGGGTGCCCACGCTGGTTATCTGGGGCGAGAGCGACCGGGCGCTGCCGAAATCGCTAGT
CGACGGGCTGGAGGAATTCGTGCCAGACATGCGGCTCGAGCGCATTCCGGAGGGCACGCACTGGATCATCCACGAACAGC
CGGAGCGCGTGAACCTGCTGATCCGCAGTGCGTTGCCCTAG

Upstream 100 bases:

>100_bases
CGCCGCGCTGCGCGGCTAAGCTGGCCAGGAACTTGCGTACACGAACACGAACAGGACGAACCGGACAACCGATATGGCCG
AGACCGCCAGGGAGACCATG

Downstream 100 bases:

>100_bases
TCCCGTAGCTTCCCGGTCCTGTCGCCGGGCTTAGCTCAAGCGCTCCCGATAGAGCCGATAGTTCTCGTCATCGAAGCATA
CGAAGGTGACCTGCTCGATG

Product: putative peptidase, S33 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTAPAVIHHRQFANLPNGTRLHYASAGEQGRPLILFVHGFPEFWYEWENQLAEFGQTHFAVAPDLRGFNLSSKPADVAAY
KPKHLVEDLVQFIRVLGYERCVIVAHDWGGALCWNLAAQFPEAVERLVIINSPHPYVFARALASDPAQQQASAYMNWLRK
PGSEQAMAANDFALLEKMLTGDASTVPAWFVGETRAKYHAAWSQPGDGGSHSLTGGVNYYRASPMHPPLPGEPAPDISRL
DPSAYIVRVPTLVIWGESDRALPKSLVDGLEEFVPDMRLERIPEGTHWIIHEQPERVNLLIRSALP

Sequences:

>Translated_306_residues
MTAPAVIHHRQFANLPNGTRLHYASAGEQGRPLILFVHGFPEFWYEWENQLAEFGQTHFAVAPDLRGFNLSSKPADVAAY
KPKHLVEDLVQFIRVLGYERCVIVAHDWGGALCWNLAAQFPEAVERLVIINSPHPYVFARALASDPAQQQASAYMNWLRK
PGSEQAMAANDFALLEKMLTGDASTVPAWFVGETRAKYHAAWSQPGDGGSHSLTGGVNYYRASPMHPPLPGEPAPDISRL
DPSAYIVRVPTLVIWGESDRALPKSLVDGLEEFVPDMRLERIPEGTHWIIHEQPERVNLLIRSALP
>Mature_305_residues
TAPAVIHHRQFANLPNGTRLHYASAGEQGRPLILFVHGFPEFWYEWENQLAEFGQTHFAVAPDLRGFNLSSKPADVAAYK
PKHLVEDLVQFIRVLGYERCVIVAHDWGGALCWNLAAQFPEAVERLVIINSPHPYVFARALASDPAQQQASAYMNWLRKP
GSEQAMAANDFALLEKMLTGDASTVPAWFVGETRAKYHAAWSQPGDGGSHSLTGGVNYYRASPMHPPLPGEPAPDISRLD
PSAYIVRVPTLVIWGESDRALPKSLVDGLEEFVPDMRLERIPEGTHWIIHEQPERVNLLIRSALP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI218777837, Length=310, Percent_Identity=34.1935483870968, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI218777840, Length=292, Percent_Identity=36.6438356164384, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI13376164, Length=292, Percent_Identity=36.6438356164384, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI27597073, Length=297, Percent_Identity=24.9158249158249, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562298, Length=298, Percent_Identity=33.5570469798658, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17554012, Length=291, Percent_Identity=32.3024054982818, Blast_Score=167, Evalue=7e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34085; Mature: 33954

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPAVIHHRQFANLPNGTRLHYASAGEQGRPLILFVHGFPEFWYEWENQLAEFGQTHFA
CCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEE
VAPDLRGFNLSSKPADVAAYKPKHLVEDLVQFIRVLGYERCVIVAHDWGGALCWNLAAQF
ECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH
PEAVERLVIINSPHPYVFARALASDPAQQQASAYMNWLRKPGSEQAMAANDFALLEKMLT
HHHHHEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GDASTVPAWFVGETRAKYHAAWSQPGDGGSHSLTGGVNYYRASPMHPPLPGEPAPDISRL
CCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHC
DPSAYIVRVPTLVIWGESDRALPKSLVDGLEEFVPDMRLERIPEGTHWIIHEQPERVNLL
CCCEEEEEECEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCCHHHHHH
IRSALP
HHCCCC
>Mature Secondary Structure 
TAPAVIHHRQFANLPNGTRLHYASAGEQGRPLILFVHGFPEFWYEWENQLAEFGQTHFA
CCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEE
VAPDLRGFNLSSKPADVAAYKPKHLVEDLVQFIRVLGYERCVIVAHDWGGALCWNLAAQF
ECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH
PEAVERLVIINSPHPYVFARALASDPAQQQASAYMNWLRKPGSEQAMAANDFALLEKMLT
HHHHHEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GDASTVPAWFVGETRAKYHAAWSQPGDGGSHSLTGGVNYYRASPMHPPLPGEPAPDISRL
CCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHC
DPSAYIVRVPTLVIWGESDRALPKSLVDGLEEFVPDMRLERIPEGTHWIIHEQPERVNLL
CCCEEEEEECEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCCHHHHHH
IRSALP
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]