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The map label for this gene is etfD [H]

Identifier: 93007075

GI number: 93007075

Start: 2761171

End: 2762808

Strand: Direct

Name: etfD [H]

Synonym: Pcryo_2251

Alternate gene names: 93007075

Gene position: 2761171-2762808 (Clockwise)

Preceding gene: 93007070

Following gene: 93007077

Centisome position: 90.24

GC content: 44.99

Gene sequence:

>1638_bases
ATGGAATTTGATGTCATTATCGTTGGTGGTGGACCTGCCGGACTTTCAGCTGCCATCCGTCTACGCCAGCTTGCCATCGC
AGCAGGTAACGATGAGTTCATGGTTTGTGTGGTCGAAAAAGGCTCGGAGTTTGGCGCTCATACTCTCTCTGGTGCGGTCA
TGGAAACACGCGCTTTGGATGAGTTGATTCCAGATTGGAAAGAAAAAGGCGCACCGCTAAACGTTCCTGCAATTGAAGAT
CGCGTCTATATGCTGGGTTCAGCGACCAAATCTATCAAATTAATGGATTCGGTCATTCCTGCCAGCATGCATAACCAAGG
CAACTATATTGTCTCATTAGGCAACGTCGTTCGTTGGTTGGCTCAACAAGCTGAAGAGCTAGAAGTCATGATGTTCCCAG
GCTTCCCCGCTGATGAAATCTTATATAATGATGATGGTTCAGTTAAAGGCGTATTGACAGGCGACATGGGTGTGGCTGCC
AGTGGCGAAGCGAAACATAGCTTTGAGCCAGGTTATGAGCTGCTTGCTAAATATACTATATTTACCGAAGGTAGCCGTGG
TCACTTAGGCAAGCGCTTGATCAGTCGTTTTAATCTTGACAAAGACTGTGACCCCCAACACTATGGTATTGGTCTAAAAG
AGCTATGGGATATTGATCCTGCTAAGCATGAAGAAGGTGTGGTCATGCATGGTTCAGGTTGGCCTTTGACTGATACGGGT
TCAACTGGAGGCTGGTGGTTGTATTTCGCTGAAAACAATCAAGTAAGCTTTGGTCTTGTTATTGATCTCTCCTATTCTAA
TCCATATATGTCGCCATTTGATGAGATGCAGCGTCTAAAACTACATCCGCTTATTCGTAATGTTCTAGAAGGCGGTAAAC
GTATCTCTTACGGCGCACGCTCGTTAACTAAAGGCGGTTTGAACTCCTTGCCAAAATTCACCTTCCCAGGTGGTGTATTA
GCTGGTGATGACGCAGGTTTCTTAAATCCTGCCAAAATCAAAGGTACCCATACTTCAATGAAGTCAGGAATGCTAGCGGC
TGAGGCGATTTTCGAAGCCTTGCAAGAAGATCGTCAACATGATGAAGTGCTGGCTTATACTACGATGTTTGAAGAGTCTT
GGTTGTATAAAGACAACTATGAAGCACGTAACTTTGCTCCTGCTATGCACCGTATGGGTCAATGGATGGGCGGCGCGTTT
ACCTTTTTAGAGCAAAATCTGATGGGCGGCAAAATGCCTTTGACCATTCATGACAATAAAAAAGATTATGATCAGCTTGA
GCGTGCGGCTCATGCCTATCAGCCAACCTATGCAAAACCGGACGGCAAATTGGTATTTGATAAATTATCGTCAGTATTTA
TCTCAAATACCAACCATACTGAAGATCAACCAGTACATTTAAAATTAACTGATCCAACAGTGCCTGTCACTATCAACTTA
CCACTCTATGCTGAGCCAGCGCGTTTATACTGCCCAGCTGGTGTTTATGAGATTGTAAAAGACGCGGAAGGCGCTAAATT
TGTCATCAATGCGCAAAACTGTGTCCATTGCAAAACTTGTGATATCAAAGACCCTTCACAGAACATCACGTGGGTAACGC
CAGAAGGCGGCGGCGGTCCTAACTATCCAAACATGTAA

Upstream 100 bases:

>100_bases
TATTGTAGATACGCAAGCCGTTGAGCCAGTTGCTGAAACGGTCGTTGTCGACAAAGCGCCAGAACCTGTTGCAGCAGAGC
CTGAAGTAGAACGTGAGTCA

Downstream 100 bases:

>100_bases
ATTGTTATTTATATATTGTTTAGATGGTTATTATTTAAAATAAGCTGCAAAAAAAATCGCCCTCAAAAGGGCGATTTTTT
GTTATAGGTATATTTAATCG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MEFDVIIVGGGPAGLSAAIRLRQLAIAAGNDEFMVCVVEKGSEFGAHTLSGAVMETRALDELIPDWKEKGAPLNVPAIED
RVYMLGSATKSIKLMDSVIPASMHNQGNYIVSLGNVVRWLAQQAEELEVMMFPGFPADEILYNDDGSVKGVLTGDMGVAA
SGEAKHSFEPGYELLAKYTIFTEGSRGHLGKRLISRFNLDKDCDPQHYGIGLKELWDIDPAKHEEGVVMHGSGWPLTDTG
STGGWWLYFAENNQVSFGLVIDLSYSNPYMSPFDEMQRLKLHPLIRNVLEGGKRISYGARSLTKGGLNSLPKFTFPGGVL
AGDDAGFLNPAKIKGTHTSMKSGMLAAEAIFEALQEDRQHDEVLAYTTMFEESWLYKDNYEARNFAPAMHRMGQWMGGAF
TFLEQNLMGGKMPLTIHDNKKDYDQLERAAHAYQPTYAKPDGKLVFDKLSSVFISNTNHTEDQPVHLKLTDPTVPVTINL
PLYAEPARLYCPAGVYEIVKDAEGAKFVINAQNCVHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Sequences:

>Translated_545_residues
MEFDVIIVGGGPAGLSAAIRLRQLAIAAGNDEFMVCVVEKGSEFGAHTLSGAVMETRALDELIPDWKEKGAPLNVPAIED
RVYMLGSATKSIKLMDSVIPASMHNQGNYIVSLGNVVRWLAQQAEELEVMMFPGFPADEILYNDDGSVKGVLTGDMGVAA
SGEAKHSFEPGYELLAKYTIFTEGSRGHLGKRLISRFNLDKDCDPQHYGIGLKELWDIDPAKHEEGVVMHGSGWPLTDTG
STGGWWLYFAENNQVSFGLVIDLSYSNPYMSPFDEMQRLKLHPLIRNVLEGGKRISYGARSLTKGGLNSLPKFTFPGGVL
AGDDAGFLNPAKIKGTHTSMKSGMLAAEAIFEALQEDRQHDEVLAYTTMFEESWLYKDNYEARNFAPAMHRMGQWMGGAF
TFLEQNLMGGKMPLTIHDNKKDYDQLERAAHAYQPTYAKPDGKLVFDKLSSVFISNTNHTEDQPVHLKLTDPTVPVTINL
PLYAEPARLYCPAGVYEIVKDAEGAKFVINAQNCVHCKTCDIKDPSQNITWVTPEGGGGPNYPNM
>Mature_545_residues
MEFDVIIVGGGPAGLSAAIRLRQLAIAAGNDEFMVCVVEKGSEFGAHTLSGAVMETRALDELIPDWKEKGAPLNVPAIED
RVYMLGSATKSIKLMDSVIPASMHNQGNYIVSLGNVVRWLAQQAEELEVMMFPGFPADEILYNDDGSVKGVLTGDMGVAA
SGEAKHSFEPGYELLAKYTIFTEGSRGHLGKRLISRFNLDKDCDPQHYGIGLKELWDIDPAKHEEGVVMHGSGWPLTDTG
STGGWWLYFAENNQVSFGLVIDLSYSNPYMSPFDEMQRLKLHPLIRNVLEGGKRISYGARSLTKGGLNSLPKFTFPGGVL
AGDDAGFLNPAKIKGTHTSMKSGMLAAEAIFEALQEDRQHDEVLAYTTMFEESWLYKDNYEARNFAPAMHRMGQWMGGAF
TFLEQNLMGGKMPLTIHDNKKDYDQLERAAHAYQPTYAKPDGKLVFDKLSSVFISNTNHTEDQPVHLKLTDPTVPVTINL
PLYAEPARLYCPAGVYEIVKDAEGAKFVINAQNCVHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=555, Percent_Identity=51.8918918918919, Blast_Score=553, Evalue=1e-157,
Organism=Escherichia coli, GI1787991, Length=407, Percent_Identity=26.5356265356265, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1786227, Length=388, Percent_Identity=28.0927835051546, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI87082155, Length=385, Percent_Identity=24.6753246753247, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25144720, Length=554, Percent_Identity=51.0830324909747, Blast_Score=529, Evalue=1e-150,
Organism=Saccharomyces cerevisiae, GI6324932, Length=571, Percent_Identity=42.031523642732, Blast_Score=440, Evalue=1e-124,
Organism=Drosophila melanogaster, GI24652256, Length=553, Percent_Identity=50.8137432188065, Blast_Score=544, Evalue=1e-155,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 59944; Mature: 59944

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDVIIVGGGPAGLSAAIRLRQLAIAAGNDEFMVCVVEKGSEFGAHTLSGAVMETRALD
CCEEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCHHHCCHHHHHHHHH
ELIPDWKEKGAPLNVPAIEDRVYMLGSATKSIKLMDSVIPASMHNQGNYIVSLGNVVRWL
HHCCCHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHCCCCCEEEEHHHHHHHH
AQQAEELEVMMFPGFPADEILYNDDGSVKGVLTGDMGVAASGEAKHSFEPGYELLAKYTI
HHHHHCEEEEEECCCCHHHEEECCCCCEEEEEECCCCEECCCCCCCCCCCCHHHHEEEEE
FTEGSRGHLGKRLISRFNLDKDCDPQHYGIGLKELWDIDPAKHEEGVVMHGSGWPLTDTG
EECCCCCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCC
STGGWWLYFAENNQVSFGLVIDLSYSNPYMSPFDEMQRLKLHPLIRNVLEGGKRISYGAR
CCCCEEEEEECCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCHH
SLTKGGLNSLPKFTFPGGVLAGDDAGFLNPAKIKGTHTSMKSGMLAAEAIFEALQEDRQH
HHCCCCHHCCCCCCCCCCEEECCCCCCCCCCEECCCHHHHHHCHHHHHHHHHHHHHHHCC
DEVLAYTTMFEESWLYKDNYEARNFAPAMHRMGQWMGGAFTFLEQNLMGGKMPLTIHDNK
CCEEEEEEHHHHCCCCCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCC
KDYDQLERAAHAYQPTYAKPDGKLVFDKLSSVFISNTNHTEDQPVHLKLTDPTVPVTINL
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCEEEEECCCCEEEEEEC
PLYAEPARLYCPAGVYEIVKDAEGAKFVINAQNCVHCKTCDIKDPSQNITWVTPEGGGGP
CCEECCCCEECCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCEEEECCCCCCCC
NYPNM
CCCCC
>Mature Secondary Structure
MEFDVIIVGGGPAGLSAAIRLRQLAIAAGNDEFMVCVVEKGSEFGAHTLSGAVMETRALD
CCEEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCHHHCCHHHHHHHHH
ELIPDWKEKGAPLNVPAIEDRVYMLGSATKSIKLMDSVIPASMHNQGNYIVSLGNVVRWL
HHCCCHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHCCCCCEEEEHHHHHHHH
AQQAEELEVMMFPGFPADEILYNDDGSVKGVLTGDMGVAASGEAKHSFEPGYELLAKYTI
HHHHHCEEEEEECCCCHHHEEECCCCCEEEEEECCCCEECCCCCCCCCCCCHHHHEEEEE
FTEGSRGHLGKRLISRFNLDKDCDPQHYGIGLKELWDIDPAKHEEGVVMHGSGWPLTDTG
EECCCCCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCC
STGGWWLYFAENNQVSFGLVIDLSYSNPYMSPFDEMQRLKLHPLIRNVLEGGKRISYGAR
CCCCEEEEEECCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCHH
SLTKGGLNSLPKFTFPGGVLAGDDAGFLNPAKIKGTHTSMKSGMLAAEAIFEALQEDRQH
HHCCCCHHCCCCCCCCCCEEECCCCCCCCCCEECCCHHHHHHCHHHHHHHHHHHHHHHCC
DEVLAYTTMFEESWLYKDNYEARNFAPAMHRMGQWMGGAFTFLEQNLMGGKMPLTIHDNK
CCEEEEEEHHHHCCCCCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCC
KDYDQLERAAHAYQPTYAKPDGKLVFDKLSSVFISNTNHTEDQPVHLKLTDPTVPVTINL
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCEEEEECCCCEEEEEEC
PLYAEPARLYCPAGVYEIVKDAEGAKFVINAQNCVHCKTCDIKDPSQNITWVTPEGGGGP
CCEECCCCEECCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCEEEECCCCCCCC
NYPNM
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9294455 [H]