Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is msrA [H]
Identifier: 93007067
GI number: 93007067
Start: 2752724
End: 2753245
Strand: Direct
Name: msrA [H]
Synonym: Pcryo_2243
Alternate gene names: 93007067
Gene position: 2752724-2753245 (Clockwise)
Preceding gene: 93007064
Following gene: 93007068
Centisome position: 89.96
GC content: 41.76
Gene sequence:
>522_bases ATGCAAACCATTATATTAGGCGGTGGCTGTTTTTGGTGCACCGAATCAGTATTTTTATCCGTAAAAGGCGTACAGTCTGT AATATCAGGTTATATGGGCGGCGATGCGGTATCAGCCAATTATGAAGCAGTCTGCGGTGGGAATACTGGTCACGTTGAAG TGATTAAAGTCGAATTTGACGAATCGATTGTCCCATTAGAAGTGATACTTGATGTCTTCTTTGCCACTCATGATCCCACT ACAATGGATCGTCAGGGTAATGATGTAGGTAGCCAATATCGTAGCGTCGTGTTCTACACTGATGAAACGCAAAAACCGAC CATCGATCGTACCATTAATAAACTGCGTGACATGGGTATAAATGTGGTGACCGAAGTACATCCTGCGGTTGAATTTTATC AAGCAGAAGACACACATCAAGACTTTTTTAATCGCAACCCAGGACAAGCTTATTGCAACTTTGCCATACCACCAAAACTT GCTAAACTACGTAAAGAATTCAGTCAATATATGGTGAGCTAA
Upstream 100 bases:
>100_bases CAGGCAACTGCACTGTTAAGCTAAATGTATATCGCCAAGCAAAATAGATTTGTAAAACATGCTTGGCTCATATTTTATAA TGATAAGAATAGGAAAAATT
Downstream 100 bases:
>100_bases GCATCACATTGCCTAACAATTTATTCGTTTCAGACATGTCTTAATTTATTATTTAATAAAAGCCAAATGCTTATAATATA AGTATTTGGCTTTTTTAATT
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MQTIILGGGCFWCTESVFLSVKGVQSVISGYMGGDAVSANYEAVCGGNTGHVEVIKVEFDESIVPLEVILDVFFATHDPT TMDRQGNDVGSQYRSVVFYTDETQKPTIDRTINKLRDMGINVVTEVHPAVEFYQAEDTHQDFFNRNPGQAYCNFAIPPKL AKLRKEFSQYMVS
Sequences:
>Translated_173_residues MQTIILGGGCFWCTESVFLSVKGVQSVISGYMGGDAVSANYEAVCGGNTGHVEVIKVEFDESIVPLEVILDVFFATHDPT TMDRQGNDVGSQYRSVVFYTDETQKPTIDRTINKLRDMGINVVTEVHPAVEFYQAEDTHQDFFNRNPGQAYCNFAIPPKL AKLRKEFSQYMVS >Mature_173_residues MQTIILGGGCFWCTESVFLSVKGVQSVISGYMGGDAVSANYEAVCGGNTGHVEVIKVEFDESIVPLEVILDVFFATHDPT TMDRQGNDVGSQYRSVVFYTDETQKPTIDRTINKLRDMGINVVTEVHPAVEFYQAEDTHQDFFNRNPGQAYCNFAIPPKL AKLRKEFSQYMVS
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=159, Percent_Identity=36.4779874213836, Blast_Score=110, Evalue=7e-25, Organism=Homo sapiens, GI208609995, Length=159, Percent_Identity=36.4779874213836, Blast_Score=110, Evalue=9e-25, Organism=Homo sapiens, GI208609993, Length=112, Percent_Identity=35.7142857142857, Blast_Score=75, Evalue=4e-14, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=36.6013071895425, Blast_Score=121, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17533973, Length=145, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320881, Length=161, Percent_Identity=32.9192546583851, Blast_Score=95, Evalue=8e-21, Organism=Drosophila melanogaster, GI24664627, Length=160, Percent_Identity=26.875, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI45553131, Length=154, Percent_Identity=26.6233766233766, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24664631, Length=160, Percent_Identity=26.875, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 19278; Mature: 19278
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIILGGGCFWCTESVFLSVKGVQSVISGYMGGDAVSANYEAVCGGNTGHVEVIKVEFD CCEEEECCCHHHHHHHHHEEHHHHHHHHHHHCCCCEECCCCEEEECCCCCCEEEEEEECC ESIVPLEVILDVFFATHDPTTMDRQGNDVGSQYRSVVFYTDETQKPTIDRTINKLRDMGI CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCC NVVTEVHPAVEFYQAEDTHQDFFNRNPGQAYCNFAIPPKLAKLRKEFSQYMVS CEEEHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTIILGGGCFWCTESVFLSVKGVQSVISGYMGGDAVSANYEAVCGGNTGHVEVIKVEFD CCEEEECCCHHHHHHHHHEEHHHHHHHHHHHCCCCEECCCCEEEECCCCCCEEEEEEECC ESIVPLEVILDVFFATHDPTTMDRQGNDVGSQYRSVVFYTDETQKPTIDRTINKLRDMGI CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCC NVVTEVHPAVEFYQAEDTHQDFFNRNPGQAYCNFAIPPKLAKLRKEFSQYMVS CEEEHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA