Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93007060
Identifier: 93007060
GI number: 93007060
Start: 2744844
End: 2745827
Strand: Direct
Name: 93007060
Synonym: Pcryo_2236
Alternate gene names: NA
Gene position: 2744844-2745827 (Clockwise)
Preceding gene: 93007059
Following gene: 93007064
Centisome position: 89.7
GC content: 47.05
Gene sequence:
>984_bases ATGAAAACGCTCCTATATCCTAAGTGCTCCGTTTTGATAGCCACTGTGTTTGCCATTAGTGCTGTCGGTATTACTGGTTG TAGCGATCACACTGAAACCAAAGCCGTTGACCGTGTCGAAGAAGCGGCAGCATTGGCACGAGTAAAAGATCTCGAAGCAC GCGCTGAAGTTATTAAAAGTAACATGCCAGCTGCCAATGACATAACTGCGACCGCAGGTGGCACTGATACGGCAAGTGGC AAGCCTACTATTAAGATGCCAGATGAATCTACGATTCCAGATGATGAGTTTGGTGCCGCTGTGCGTCGCGGCTTACAAAT TGCCAATCACACTTATAAGGAGATGCCAAATAACGTTGGTAATCAGCTGAACTGTACAAGCTGTCACCTTGGCAATGGTT CAGAGGCTTATGCTGCACCTTGGAACAATATGCCCAGCGTCTATCCTATCTATCGTACGCGCGCAGGTCGTGTCAATACG ATACAAGAACGTATTAACGGCTGTTTTGAGCGTTCGATGAACGGTAAGGCACTGGATCTTGGTTCAGATGATATGAACGC AATGGTGGCTTACATGAGCTGGTTGTCACAAGACATGCCATTTGGCGTATCGCCTGAAGGTCGTGGTTTTGTCAAAGTGG ATAAAAACCTCGAGCCAAACACTGACAATGGCAAAAAGCTATTTGCAGAGAAGTGTAGCGTTTGTCATGGTGCAACTGGT GAAGGTCAGTATAACGACGATGGCACCTACGTTTATCCTGCTGTCGCTGGTGAAAAGTCCTTCAATGATGGTGCTGGTAT GGCACGTACCTATACGGCTGCGGCATTTATCAAAGGCAAAATGCCCTTTGGTCAAGGCAATACGTTAACTGACCAAGAAG CCGTCGATATTGCTGCTTACTTTACTCACTTGCCACGTCCGGTAAAAGCCAATAAAGACAAAGATTGGCCAAAAGGCGAC GCCCCTAAAGATGTACGTCGCTAA
Upstream 100 bases:
>100_bases TTTACTGACACAAAATATCGAGTTGGTTCTACCATTATGGCACCTAAACTAGCATATAAATTTAAATTTCTATATTACTT TTTAAAATAAGGATATTCCT
Downstream 100 bases:
>100_bases TTTAAAAATGTTATAAATGCTAGAAGAACGAAAAGCCCAGTTATCTTAAATAACTGGGCTTTTTGATTTTCCTGAGTTCT TCCTTAAATCTTAGTTTTTA
Product: cytochrome c, class I
Products: NA
Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Gluconate 2-Dehydrogenase; Cytochrome C Signal Peptide Protein; C-Type Cytochrome Family Protein; C-Type Cytochrome; Class I Cytochrome C; Diheme-Containing SoxA-Like Protein; Thiosulfate Dehydrogenase; Cytochrome C Family; Cytochrome; Cytochrome C Family Protein Degenerate; Quinol-Cytochrome C Reductase Cytochrome C Subunit; CYTA Protein; Di-Heme Cytochrome C; OmpA/MotB
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKTLLYPKCSVLIATVFAISAVGITGCSDHTETKAVDRVEEAAALARVKDLEARAEVIKSNMPAANDITATAGGTDTASG KPTIKMPDESTIPDDEFGAAVRRGLQIANHTYKEMPNNVGNQLNCTSCHLGNGSEAYAAPWNNMPSVYPIYRTRAGRVNT IQERINGCFERSMNGKALDLGSDDMNAMVAYMSWLSQDMPFGVSPEGRGFVKVDKNLEPNTDNGKKLFAEKCSVCHGATG EGQYNDDGTYVYPAVAGEKSFNDGAGMARTYTAAAFIKGKMPFGQGNTLTDQEAVDIAAYFTHLPRPVKANKDKDWPKGD APKDVRR
Sequences:
>Translated_327_residues MKTLLYPKCSVLIATVFAISAVGITGCSDHTETKAVDRVEEAAALARVKDLEARAEVIKSNMPAANDITATAGGTDTASG KPTIKMPDESTIPDDEFGAAVRRGLQIANHTYKEMPNNVGNQLNCTSCHLGNGSEAYAAPWNNMPSVYPIYRTRAGRVNT IQERINGCFERSMNGKALDLGSDDMNAMVAYMSWLSQDMPFGVSPEGRGFVKVDKNLEPNTDNGKKLFAEKCSVCHGATG EGQYNDDGTYVYPAVAGEKSFNDGAGMARTYTAAAFIKGKMPFGQGNTLTDQEAVDIAAYFTHLPRPVKANKDKDWPKGD APKDVRR >Mature_327_residues MKTLLYPKCSVLIATVFAISAVGITGCSDHTETKAVDRVEEAAALARVKDLEARAEVIKSNMPAANDITATAGGTDTASG KPTIKMPDESTIPDDEFGAAVRRGLQIANHTYKEMPNNVGNQLNCTSCHLGNGSEAYAAPWNNMPSVYPIYRTRAGRVNT IQERINGCFERSMNGKALDLGSDDMNAMVAYMSWLSQDMPFGVSPEGRGFVKVDKNLEPNTDNGKKLFAEKCSVCHGATG EGQYNDDGTYVYPAVAGEKSFNDGAGMARTYTAAAFIKGKMPFGQGNTLTDQEAVDIAAYFTHLPRPVKANKDKDWPKGD APKDVRR
Specific function: Unknown
COG id: COG3258
COG function: function code C; Cytochrome c
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35267; Mature: 35267
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLYPKCSVLIATVFAISAVGITGCSDHTETKAVDRVEEAAALARVKDLEARAEVIKS CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NMPAANDITATAGGTDTASGKPTIKMPDESTIPDDEFGAAVRRGLQIANHTYKEMPNNVG CCCCCCCEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC NQLNCTSCHLGNGSEAYAAPWNNMPSVYPIYRTRAGRVNTIQERINGCFERSMNGKALDL CCCCCEEEECCCCCCEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEC GSDDMNAMVAYMSWLSQDMPFGVSPEGRGFVKVDKNLEPNTDNGKKLFAEKCSVCHGATG CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC EGQYNDDGTYVYPAVAGEKSFNDGAGMARTYTAAAFIKGKMPFGQGNTLTDQEAVDIAAY CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHH FTHLPRPVKANKDKDWPKGDAPKDVRR HHHCCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MKTLLYPKCSVLIATVFAISAVGITGCSDHTETKAVDRVEEAAALARVKDLEARAEVIKS CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NMPAANDITATAGGTDTASGKPTIKMPDESTIPDDEFGAAVRRGLQIANHTYKEMPNNVG CCCCCCCEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC NQLNCTSCHLGNGSEAYAAPWNNMPSVYPIYRTRAGRVNTIQERINGCFERSMNGKALDL CCCCCEEEECCCCCCEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEC GSDDMNAMVAYMSWLSQDMPFGVSPEGRGFVKVDKNLEPNTDNGKKLFAEKCSVCHGATG CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC EGQYNDDGTYVYPAVAGEKSFNDGAGMARTYTAAAFIKGKMPFGQGNTLTDQEAVDIAAY CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHH FTHLPRPVKANKDKDWPKGDAPKDVRR HHHCCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA