Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006982
Identifier: 93006982
GI number: 93006982
Start: 2645040
End: 2646158
Strand: Direct
Name: 93006982
Synonym: Pcryo_2158
Alternate gene names: NA
Gene position: 2645040-2646158 (Clockwise)
Preceding gene: 93006981
Following gene: 93006983
Centisome position: 86.44
GC content: 34.23
Gene sequence:
>1119_bases ATGAAAATAGGACGTAATGATAAGTGTTGGTGCGGTTCAGGGAAAAAATTTAAACGTTGCCACTATGGACGTGAAAATGA GACTCCTGTGAGTAAAGGTGAGGCTATTGGTCATAGTCAAAAAAATGCTTCACGAAAGTATTGTTATGCCCCCGCTGATT TAAAACATGAGTGTAGTCAAAAAATCATCAATGCTCATACCGTCTCAAAAAGTAGTAGCCTAAAAGAAATTGCAGATGAA AGTAATCATGTTTTAGGGTTAAAAATAAACTTCGCGAATATAGCAAGAAACAAAGGGAAGCTAATTCCAGAAAAAATAGG AATTAATCAAGCTTCTACCTTTAAGGGTTTCTGCTCAAAACATGATAAGTCTCTTTTTTCTTGTATTGAAGATAGAGAGT TTATTGGAGATGATGAACAGTGTTTAGCTCTAATGTACCGTTCAGTAGCGAAAGAGATTTATGCTAAAGAAGGTGGGCTT AACACCTCTGATTTCGCTAAAAATAGCGATAAAGGTAAGAACATATTAGATCAAATGTTTATTCAAAAATTTGCTGCAAA CCATGAAACAGGAACTAAAGCTGCTCTTACAGAATTATCAGAGCTTAAATCTCAACTGGATAACCAACTTTTAGGAAAAT CAGTTGACAGTTTGAGCCATCTTATTATCCATTCAACATCACCCATGCCTGTTGCTGTTTCATCAGTTGTTTCTCCTATA ACTGACTTTGATGGAAATTTAATTCAAGATTTAGGTAACTTAAGCCTTGTTGCTGAACACTTAGTTTTTAATTCATTTTC TAGTGATGGTAAAGGATATGTGGTTTTTAGTTGGTTAAAAACCTCTACTAAAGTATTAAGCTTTATCAACTCACTATTAG CTTTAGAAGAAAACAAAATTTTTAGTTCGCTAATACGGTTCTTTTTTGGACTTGCTGAAAATACATTTATCTCACCTGTA TGGTGGAATGGTCTATCGAGTGAACAAAAAGATAAAATAAATAGTCTTATCATGTCAGGGGTAAGTCCGTTCGTGCACAA CGATAGAAACTTACTAGTTGATGATGGTATAAGTTTTTCGGGCTGGAAAGTAGGTAGCCTTAGGAGAATAAATTTTTAA
Upstream 100 bases:
>100_bases ATAGCTAGCTTACATTTTCGTAGTGTTAGGTGTCATAAACTTCACCCAGCCTACGCGATATCGAATATTTTCTTAGCAAA TTAAATATAAGCAGAAATCT
Downstream 100 bases:
>100_bases TAAGTCTTTAACTTTAAACGAACAAAAAATATTTTGCTATTTTTTTGCTGTTTAGTAAATTAATAAAGTCTATATAATCA AGTTGAATCTTAAGTGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: SecC Motif-Containing Protein; SecC Domain-Containing Protein-Containing Protein
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKIGRNDKCWCGSGKKFKRCHYGRENETPVSKGEAIGHSQKNASRKYCYAPADLKHECSQKIINAHTVSKSSSLKEIADE SNHVLGLKINFANIARNKGKLIPEKIGINQASTFKGFCSKHDKSLFSCIEDREFIGDDEQCLALMYRSVAKEIYAKEGGL NTSDFAKNSDKGKNILDQMFIQKFAANHETGTKAALTELSELKSQLDNQLLGKSVDSLSHLIIHSTSPMPVAVSSVVSPI TDFDGNLIQDLGNLSLVAEHLVFNSFSSDGKGYVVFSWLKTSTKVLSFINSLLALEENKIFSSLIRFFFGLAENTFISPV WWNGLSSEQKDKINSLIMSGVSPFVHNDRNLLVDDGISFSGWKVGSLRRINF
Sequences:
>Translated_372_residues MKIGRNDKCWCGSGKKFKRCHYGRENETPVSKGEAIGHSQKNASRKYCYAPADLKHECSQKIINAHTVSKSSSLKEIADE SNHVLGLKINFANIARNKGKLIPEKIGINQASTFKGFCSKHDKSLFSCIEDREFIGDDEQCLALMYRSVAKEIYAKEGGL NTSDFAKNSDKGKNILDQMFIQKFAANHETGTKAALTELSELKSQLDNQLLGKSVDSLSHLIIHSTSPMPVAVSSVVSPI TDFDGNLIQDLGNLSLVAEHLVFNSFSSDGKGYVVFSWLKTSTKVLSFINSLLALEENKIFSSLIRFFFGLAENTFISPV WWNGLSSEQKDKINSLIMSGVSPFVHNDRNLLVDDGISFSGWKVGSLRRINF >Mature_372_residues MKIGRNDKCWCGSGKKFKRCHYGRENETPVSKGEAIGHSQKNASRKYCYAPADLKHECSQKIINAHTVSKSSSLKEIADE SNHVLGLKINFANIARNKGKLIPEKIGINQASTFKGFCSKHDKSLFSCIEDREFIGDDEQCLALMYRSVAKEIYAKEGGL NTSDFAKNSDKGKNILDQMFIQKFAANHETGTKAALTELSELKSQLDNQLLGKSVDSLSHLIIHSTSPMPVAVSSVVSPI TDFDGNLIQDLGNLSLVAEHLVFNSFSSDGKGYVVFSWLKTSTKVLSFINSLLALEENKIFSSLIRFFFGLAENTFISPV WWNGLSSEQKDKINSLIMSGVSPFVHNDRNLLVDDGISFSGWKVGSLRRINF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41249; Mature: 41249
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGRNDKCWCGSGKKFKRCHYGRENETPVSKGEAIGHSQKNASRKYCYAPADLKHECSQ CCCCCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHH KIINAHTVSKSSSLKEIADESNHVLGLKINFANIARNKGKLIPEKIGINQASTFKGFCSK HHHHHHHCCCHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCHHHHCCCCHHHHHHHHHH HDKSLFSCIEDREFIGDDEQCLALMYRSVAKEIYAKEGGLNTSDFAKNSDKGKNILDQMF HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH IQKFAANHETGTKAALTELSELKSQLDNQLLGKSVDSLSHLIIHSTSPMPVAVSSVVSPI HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TDFDGNLIQDLGNLSLVAEHLVFNSFSSDGKGYVVFSWLKTSTKVLSFINSLLALEENKI HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH FSSLIRFFFGLAENTFISPVWWNGLSSEQKDKINSLIMSGVSPFVHNDRNLLVDDGISFS HHHHHHHHHHHHCCCEECCHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCC GWKVGSLRRINF CEECCCEEECCC >Mature Secondary Structure MKIGRNDKCWCGSGKKFKRCHYGRENETPVSKGEAIGHSQKNASRKYCYAPADLKHECSQ CCCCCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHH KIINAHTVSKSSSLKEIADESNHVLGLKINFANIARNKGKLIPEKIGINQASTFKGFCSK HHHHHHHCCCHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCHHHHCCCCHHHHHHHHHH HDKSLFSCIEDREFIGDDEQCLALMYRSVAKEIYAKEGGLNTSDFAKNSDKGKNILDQMF HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH IQKFAANHETGTKAALTELSELKSQLDNQLLGKSVDSLSHLIIHSTSPMPVAVSSVVSPI HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TDFDGNLIQDLGNLSLVAEHLVFNSFSSDGKGYVVFSWLKTSTKVLSFINSLLALEENKI HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH FSSLIRFFFGLAENTFISPVWWNGLSSEQKDKINSLIMSGVSPFVHNDRNLLVDDGISFS HHHHHHHHHHHHCCCEECCHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCC GWKVGSLRRINF CEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA