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The map label for this gene is 93006975

Identifier: 93006975

GI number: 93006975

Start: 2634580

End: 2635014

Strand: Direct

Name: 93006975

Synonym: Pcryo_2151

Alternate gene names: NA

Gene position: 2634580-2635014 (Clockwise)

Preceding gene: 93006974

Following gene: 93006981

Centisome position: 86.1

GC content: 42.53

Gene sequence:

>435_bases
ATGGCAGATTATTTTAATTGGATTAAAGCGGCACACATTATATCCGTGGTGTGCTGGTTTGCAGCGATTTTCTACTTGCC
GCGCCTATTTGTCTATCATGCAATGAGCGATGACAAGATCAGTCAAGAGCGCTTTACTATCATGGAGCGCAAGCTCTATC
GCGGCATCATGACGCCAGCTATGATAGCGACGTGGGCTTTTGGGTTATGGATGGTGTTTTTGGGTTGGGACGTCTATAAA
ACCCAAGGCTGGCTACACGTAAAGATCTTTCTAGTTATTCTATTGTCCGCTTATCATGGTGCCTGTGGTTTTTATCGTAA
AAAGCTGGTCGATAATCCACAATATAAGTCGCATGTATTTTGGCGTTGGTTTAATGAAGTACCCGTATTTGCTTTAGTCA
TTATTGTGATTCTAGTGGTGGTTAAACCGTTCTAA

Upstream 100 bases:

>100_bases
TGAGGCTGAGTAGTTTTGGCTTAACGCTACCATTATTAGATAATCTGCGCTAAGCTTGCCCGCGTTTATCATTGCTTAAA
ATAACCAAAGAGACTTCAGC

Downstream 100 bases:

>100_bases
AATTGGCTCTAGTATAGGCAATACTGAATAAAAAAGCGTCCCTCACTTGATGAAGTGAGGGACGCTTTTTTATGTTTGAA
TAACTATAGTCAGAGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MADYFNWIKAAHIISVVCWFAAIFYLPRLFVYHAMSDDKISQERFTIMERKLYRGIMTPAMIATWAFGLWMVFLGWDVYK
TQGWLHVKIFLVILLSAYHGACGFYRKKLVDNPQYKSHVFWRWFNEVPVFALVIIVILVVVKPF

Sequences:

>Translated_144_residues
MADYFNWIKAAHIISVVCWFAAIFYLPRLFVYHAMSDDKISQERFTIMERKLYRGIMTPAMIATWAFGLWMVFLGWDVYK
TQGWLHVKIFLVILLSAYHGACGFYRKKLVDNPQYKSHVFWRWFNEVPVFALVIIVILVVVKPF
>Mature_143_residues
ADYFNWIKAAHIISVVCWFAAIFYLPRLFVYHAMSDDKISQERFTIMERKLYRGIMTPAMIATWAFGLWMVFLGWDVYKT
QGWLHVKIFLVILLSAYHGACGFYRKKLVDNPQYKSHVFWRWFNEVPVFALVIIVILVVVKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 17122; Mature: 16990

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADYFNWIKAAHIISVVCWFAAIFYLPRLFVYHAMSDDKISQERFTIMERKLYRGIMTPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MIATWAFGLWMVFLGWDVYKTQGWLHVKIFLVILLSAYHGACGFYRKKLVDNPQYKSHVF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
WRWFNEVPVFALVIIVILVVVKPF
HHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADYFNWIKAAHIISVVCWFAAIFYLPRLFVYHAMSDDKISQERFTIMERKLYRGIMTPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
MIATWAFGLWMVFLGWDVYKTQGWLHVKIFLVILLSAYHGACGFYRKKLVDNPQYKSHVF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
WRWFNEVPVFALVIIVILVVVKPF
HHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]