Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is blh [H]
Identifier: 93006895
GI number: 93006895
Start: 2538492
End: 2538824
Strand: Direct
Name: blh [H]
Synonym: Pcryo_2071
Alternate gene names: 93006895
Gene position: 2538492-2538824 (Clockwise)
Preceding gene: 93006894
Following gene: 93006896
Centisome position: 82.96
GC content: 45.05
Gene sequence:
>333_bases ATGAGCCATCAAGTGAGTATTACCGGACAAATCACCCCTGACCAAGTACCGATGATTGCAGAAAATGGTTTTAAAACCAT TATTAACAATCGTCCGGATGGTGAAGAACCGAACCAGCCAACCAGTGCTGAGATTGCTGCTGCCGCCGAAAAAGCAGGAC TTGCTTATAAAGAAGTGTCCTTTGCTGGTAGTGAGCTCAATCAGAACCATGTTGAAGAGTTTGCTGACTTTTTTAATCAA GCTGAGCAACCAATGTTGATATTCTGCCGTACGGGCAATCGCTCAACTGGTATCTATGAAGCGGCTAAGCGTATGGACTT GCTAGACGACTGA
Upstream 100 bases:
>100_bases AGCTTACATACTTTATCTTTAGAAAATTATCCATTGCGCTTAGGCTTTGTATTCTTGTACTATCCATTTAATTTTAATAT AAAAAATAAAAGGAGCTCTT
Downstream 100 bases:
>100_bases TATCATAATCAATAATTTAAAGCAATAAACCAAGAAGCCCATATAAACATATGGGCTTTTATAATATTTAAGACTATATT TTAGATGCTGTAAAGCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSHQVSITGQITPDQVPMIAENGFKTIINNRPDGEEPNQPTSAEIAAAAEKAGLAYKEVSFAGSELNQNHVEEFADFFNQ AEQPMLIFCRTGNRSTGIYEAAKRMDLLDD
Sequences:
>Translated_110_residues MSHQVSITGQITPDQVPMIAENGFKTIINNRPDGEEPNQPTSAEIAAAAEKAGLAYKEVSFAGSELNQNHVEEFADFFNQ AEQPMLIFCRTGNRSTGIYEAAKRMDLLDD >Mature_109_residues SHQVSITGQITPDQVPMIAENGFKTIINNRPDGEEPNQPTSAEIAAAAEKAGLAYKEVSFAGSELNQNHVEEFADFFNQA EQPMLIFCRTGNRSTGIYEAAKRMDLLDD
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 12091; Mature: 11959
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQVSITGQITPDQVPMIAENGFKTIINNRPDGEEPNQPTSAEIAAAAEKAGLAYKEVS CCCEEEEEECCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH FAGSELNQNHVEEFADFFNQAEQPMLIFCRTGNRSTGIYEAAKRMDLLDD CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SHQVSITGQITPDQVPMIAENGFKTIINNRPDGEEPNQPTSAEIAAAAEKAGLAYKEVS CCEEEEEECCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH FAGSELNQNHVEEFADFFNQAEQPMLIFCRTGNRSTGIYEAAKRMDLLDD CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]