Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93006894
Identifier: 93006894
GI number: 93006894
Start: 2538042
End: 2538368
Strand: Direct
Name: 93006894
Synonym: Pcryo_2070
Alternate gene names: NA
Gene position: 2538042-2538368 (Clockwise)
Preceding gene: 93006893
Following gene: 93006895
Centisome position: 82.95
GC content: 43.43
Gene sequence:
>327_bases ATGACCGATGACTTAACTATTTATAAGCAAATTTACCCAAGCCAATGTATCAAAATTGCAGAGCTTGGCTACCGCTCTGT GCTTAATATTCGTCCTGACGCTGAGGTTGATTCGCAGCCTAATAGCTGTGATTTTAGCAGTGCAACGGCGAAAGCCAATT TGAATTATCAGCATTTACCCTTTGATGATGAGCGCTTAAGTATGGCGACTGTGGAGCAGTTTGCTGCTTTTTATCGTACG ATGCCAAAACCCATATTGATGTTTTGTGGTACGGGCGCACGTGCCAAACTGTTGTACCAAAGCGCATTGATGCAAGGGCT GATATAA
Upstream 100 bases:
>100_bases CTAAATTATTAGGACAACTAAAAAAAACTACTAGCCTGTAGCGCTTTTTTTGAACTCATTATATCCTCTACTTTTTTTAT AACCTTTATTGATATTACTT
Downstream 100 bases:
>100_bases GCGTTGATATAAAAAGGCAATAAAGCTTACATACTTTATCTTTAGAAAATTATCCATTGCGCTTAGGCTTTGTATTCTTG TACTATCCATTTAATTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTDDLTIYKQIYPSQCIKIAELGYRSVLNIRPDAEVDSQPNSCDFSSATAKANLNYQHLPFDDERLSMATVEQFAAFYRT MPKPILMFCGTGARAKLLYQSALMQGLI
Sequences:
>Translated_108_residues MTDDLTIYKQIYPSQCIKIAELGYRSVLNIRPDAEVDSQPNSCDFSSATAKANLNYQHLPFDDERLSMATVEQFAAFYRT MPKPILMFCGTGARAKLLYQSALMQGLI >Mature_107_residues TDDLTIYKQIYPSQCIKIAELGYRSVLNIRPDAEVDSQPNSCDFSSATAKANLNYQHLPFDDERLSMATVEQFAAFYRTM PKPILMFCGTGARAKLLYQSALMQGLI
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12163; Mature: 12032
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDLTIYKQIYPSQCIKIAELGYRSVLNIRPDAEVDSQPNSCDFSSATAKANLNYQHLP CCCCHHHHHHHCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC FDDERLSMATVEQFAAFYRTMPKPILMFCGTGARAKLLYQSALMQGLI CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TDDLTIYKQIYPSQCIKIAELGYRSVLNIRPDAEVDSQPNSCDFSSATAKANLNYQHLP CCCHHHHHHHCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC FDDERLSMATVEQFAAFYRTMPKPILMFCGTGARAKLLYQSALMQGLI CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA