Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is recX [H]
Identifier: 93006839
GI number: 93006839
Start: 2478866
End: 2479987
Strand: Direct
Name: recX [H]
Synonym: Pcryo_2015
Alternate gene names: 93006839
Gene position: 2478866-2479987 (Clockwise)
Preceding gene: 93006838
Following gene: 93006846
Centisome position: 81.01
GC content: 40.37
Gene sequence:
>1122_bases ATGAAAATAAAAACGTTAGCTGAAATACTCGCTGAGTCGGATACTGATTCAGCGAGTTCTACGCCTAAAAACAAGAAACC CATTGAACAACATTCATCTACTAGGTACTCATATAAAGACAAGCCTAAAAGTACCAGTAAAACTGGCAAGCGCTCTCAGA ATCTAAATACATATGATTTAGATGAGAAGTGTACAATAGATAACCATACTAACTTTACAGCAGATTCGACTGGCGCCTCT TCCTCTTTAAAAATTTCATCCAAATCCAAAAAACGTAAAAAACACTTTCATCCAGCTGCTACTTTCTACGCTGAGCCTAA TAGCGTACCTGCTTATCAGCCACCTGCTGCGCAAAGTATCAAAGAGATGCTGGCTGAAGTTAAACATGCGGTTCATGACA ATGTAGAAGATAGTGTCTCTATTAATGAGACTGGCGTTGATTCAGCTTTGATGGACTCAGAACCAGCATTTGAATCGGTA GCTGCTCATGATAGTGAGGCAGACAACCAAAATAGCCAAATTGATAACTTACCAGCTGCTCTAAAGGCATATTTGCGCAC GCCTGAGCAGCGCCAAGCGGAAATGGATGCTATCAAAGCAGAAAGTCGCTTACGTTGGCTGGCATTTTATTATTTGTCAC GCCGCGAATACGGCAAGGCTGAGCTTAAGCAAAAATTGCTAAATAAAGAGCAAGAAGCGGCTAAAATTGATGCCTTACTC GATGAGTTCGAAGAAAAAGGCTATCAAAGTGATTACCGCACTACTCTAATGCTGATTCGTGAAAATATCAGAAAAGGACG CGGCAGAGGTCGTATCAAGCAAGAATTCCATCGTAAAAAGATGACGATGCCCGATAATATAGATGAACTTATCGATATGG CCAATGCTGAATCTGATGAGTTTAGTGAATTTATAGATGACAGCACAGATAATTTGGTCGAAGGCATAGACTGGCTCAAA CTGGCAGTCACAGCGCGTATCAAAAAATATGGTGATGATATACCCACTGAACAAAAAGACAAAGCAAGGCAGCTGCGGTT TTTACAATATCGCGGTTTTAATAGTGATATTTGCTTTGCGGCATTGAACTATACGTTAGATACTTTAGATGAACGTTTTT AG
Upstream 100 bases:
>100_bases AGTAAAGTCGCGACGGTAGATAAAGCTAATGAAGAACAAGCCGCTGAACCTGTACAATAACGGTATATTTTCAAACCGTT ATCAGCAACTATGATGTCTT
Downstream 100 bases:
>100_bases CAATTTTTAATGCAACAGTCTTAACCTTTGTCGTTCGCTATTATATTTTAGATATAAAAAAGCGCACCTAATCAGGTGCG CTTTTTTATCGTTTTAAATG
Product: putative inhibitor/regulator of RecA, RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKIKTLAEILAESDTDSASSTPKNKKPIEQHSSTRYSYKDKPKSTSKTGKRSQNLNTYDLDEKCTIDNHTNFTADSTGAS SSLKISSKSKKRKKHFHPAATFYAEPNSVPAYQPPAAQSIKEMLAEVKHAVHDNVEDSVSINETGVDSALMDSEPAFESV AAHDSEADNQNSQIDNLPAALKAYLRTPEQRQAEMDAIKAESRLRWLAFYYLSRREYGKAELKQKLLNKEQEAAKIDALL DEFEEKGYQSDYRTTLMLIRENIRKGRGRGRIKQEFHRKKMTMPDNIDELIDMANAESDEFSEFIDDSTDNLVEGIDWLK LAVTARIKKYGDDIPTEQKDKARQLRFLQYRGFNSDICFAALNYTLDTLDERF
Sequences:
>Translated_373_residues MKIKTLAEILAESDTDSASSTPKNKKPIEQHSSTRYSYKDKPKSTSKTGKRSQNLNTYDLDEKCTIDNHTNFTADSTGAS SSLKISSKSKKRKKHFHPAATFYAEPNSVPAYQPPAAQSIKEMLAEVKHAVHDNVEDSVSINETGVDSALMDSEPAFESV AAHDSEADNQNSQIDNLPAALKAYLRTPEQRQAEMDAIKAESRLRWLAFYYLSRREYGKAELKQKLLNKEQEAAKIDALL DEFEEKGYQSDYRTTLMLIRENIRKGRGRGRIKQEFHRKKMTMPDNIDELIDMANAESDEFSEFIDDSTDNLVEGIDWLK LAVTARIKKYGDDIPTEQKDKARQLRFLQYRGFNSDICFAALNYTLDTLDERF >Mature_373_residues MKIKTLAEILAESDTDSASSTPKNKKPIEQHSSTRYSYKDKPKSTSKTGKRSQNLNTYDLDEKCTIDNHTNFTADSTGAS SSLKISSKSKKRKKHFHPAATFYAEPNSVPAYQPPAAQSIKEMLAEVKHAVHDNVEDSVSINETGVDSALMDSEPAFESV AAHDSEADNQNSQIDNLPAALKAYLRTPEQRQAEMDAIKAESRLRWLAFYYLSRREYGKAELKQKLLNKEQEAAKIDALL DEFEEKGYQSDYRTTLMLIRENIRKGRGRGRIKQEFHRKKMTMPDNIDELIDMANAESDEFSEFIDDSTDNLVEGIDWLK LAVTARIKKYGDDIPTEQKDKARQLRFLQYRGFNSDICFAALNYTLDTLDERF
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 42481; Mature: 42481
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTLAEILAESDTDSASSTPKNKKPIEQHSSTRYSYKDKPKSTSKTGKRSQNLNTYDL CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCC DEKCTIDNHTNFTADSTGASSSLKISSKSKKRKKHFHPAATFYAEPNSVPAYQPPAAQSI CCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHCCCHHEEEECCCCCCCCCCHHHHHH KEMLAEVKHAVHDNVEDSVSINETGVDSALMDSEPAFESVAAHDSEADNQNSQIDNLPAA HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHH LKAYLRTPEQRQAEMDAIKAESRLRWLAFYYLSRREYGKAELKQKLLNKEQEAAKIDALL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH DEFEEKGYQSDYRTTLMLIRENIRKGRGRGRIKQEFHRKKMTMPDNIDELIDMANAESDE HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH FSEFIDDSTDNLVEGIDWLKLAVTARIKKYGDDIPTEQKDKARQLRFLQYRGFNSDICFA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH ALNYTLDTLDERF HHHHHHHHHHCCC >Mature Secondary Structure MKIKTLAEILAESDTDSASSTPKNKKPIEQHSSTRYSYKDKPKSTSKTGKRSQNLNTYDL CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCC DEKCTIDNHTNFTADSTGASSSLKISSKSKKRKKHFHPAATFYAEPNSVPAYQPPAAQSI CCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHCCCHHEEEECCCCCCCCCCHHHHHH KEMLAEVKHAVHDNVEDSVSINETGVDSALMDSEPAFESVAAHDSEADNQNSQIDNLPAA HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHH LKAYLRTPEQRQAEMDAIKAESRLRWLAFYYLSRREYGKAELKQKLLNKEQEAAKIDALL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH DEFEEKGYQSDYRTTLMLIRENIRKGRGRGRIKQEFHRKKMTMPDNIDELIDMANAESDE HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH FSEFIDDSTDNLVEGIDWLKLAVTARIKKYGDDIPTEQKDKARQLRFLQYRGFNSDICFA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH ALNYTLDTLDERF HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA