Click here to switch to the map view.

The map label for this gene is yhbY [C]

Identifier: 93006846

GI number: 93006846

Start: 2486359

End: 2486667

Strand: Direct

Name: yhbY [C]

Synonym: Pcryo_2022

Alternate gene names: 93006846

Gene position: 2486359-2486667 (Clockwise)

Preceding gene: 93006839

Following gene: 93006847

Centisome position: 81.26

GC content: 42.07

Gene sequence:

>309_bases
ATGCAACTTGATAACGCAACCATCAAACGCTTAAAAGGCATTGGTCATGATTTGAAACCGATTGTCATGATTGGCAATAA
AGGTGTTACGCCAAGCATTACTGAAGAGATTGATCGCGCCTTATCAGATCATGAACTGATTAAAGTAAAATTGCCTGCTG
GTACCAAGGAAGAGCGTGATGTCATCGGTGCTGAGCTTGCTGCTACTGCAAAGGCAACTTTGATTCACTCAATTGGTCGT
ATGGCGCTATTGCTACGCAAAAACCCAAATGCCAATCCTAAGCTTTCAAATCTTGCTCGTAATGTGTAA

Upstream 100 bases:

>100_bases
TCCTGCTGATCTCATGCAAGATGATCATAGATTAATTATAATGGTCATCAATTGCTCTAAATTTTATTATATTTTGTTTT
TACCAACCCCTAGGAATTCT

Downstream 100 bases:

>100_bases
TGCCTCATTACTTGCTAAGTTTATATCGTCTGTTGTATATAAAGTGGTTTAAAATAGCCTGCTGAGTTATTTTTAGACAG
ATGATGACGGTGAATAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MQLDNATIKRLKGIGHDLKPIVMIGNKGVTPSITEEIDRALSDHELIKVKLPAGTKEERDVIGAELAATAKATLIHSIGR
MALLLRKNPNANPKLSNLARNV

Sequences:

>Translated_102_residues
MQLDNATIKRLKGIGHDLKPIVMIGNKGVTPSITEEIDRALSDHELIKVKLPAGTKEERDVIGAELAATAKATLIHSIGR
MALLLRKNPNANPKLSNLARNV
>Mature_102_residues
MQLDNATIKRLKGIGHDLKPIVMIGNKGVTPSITEEIDRALSDHELIKVKLPAGTKEERDVIGAELAATAKATLIHSIGR
MALLLRKNPNANPKLSNLARNV

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=96, Percent_Identity=35.4166666666667, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 11039; Mature: 11039

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDNATIKRLKGIGHDLKPIVMIGNKGVTPSITEEIDRALSDHELIKVKLPAGTKEERD
CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHH
VIGAELAATAKATLIHSIGRMALLLRKNPNANPKLSNLARNV
HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHCCC
>Mature Secondary Structure
MQLDNATIKRLKGIGHDLKPIVMIGNKGVTPSITEEIDRALSDHELIKVKLPAGTKEERD
CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHH
VIGAELAATAKATLIHSIGRMALLLRKNPNANPKLSNLARNV
HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]