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The map label for this gene is yafM [H]

Identifier: 93006786

GI number: 93006786

Start: 2423798

End: 2424292

Strand: Direct

Name: yafM [H]

Synonym: Pcryo_1962

Alternate gene names: 93006786

Gene position: 2423798-2424292 (Clockwise)

Preceding gene: 93006785

Following gene: 93006788

Centisome position: 79.21

GC content: 36.36

Gene sequence:

>495_bases
ATGCAGTATCGAAGGTACTATCAAAAAGGAGCAACCTACTTTTTTACTGTCAACCTAGCTGATAGGTCTAGCGATTTGCT
AGTCAAAGAAATTGCAACACTTAGACATGCCTTCAAACTCGTTAAACAAAAATACCCCTTCTACATTGATGCCATTGTTA
TCTTGCCAGACCATTTGCATATGTTATGTACTATGCCAAATAATGATGCAGACTTCTCTAAACGAATAAAACTTATTAAA
TATTACTTTTCTTATAACATTGCCAAAACAGAATCTATTTCGAGTAGTAGACTTAAAAAAAGCGAGCGTGGTATTTGGCA
ACGTCGATTTTGGGAGCATTGCATTCGCGATGAATCAGACTATCGAGCACATATTGATTATATTCATATGAACCCTATTA
AACATGGGTATGTTAAACAGGCTAAAGACTGGCAATATTCTTCATTTCATCGATTTGTGACAGATGGGTTGCTTCCTATC
AATTGGGGCGGATGA

Upstream 100 bases:

>100_bases
TCCAAACCCGAAATTACCTACAATCCGTAGGTTGGGTGGAGCTTGCGACACCCAACAAAATTAAGTAATATCAGCTATTA
GTTATAATTTGCAGAATAGC

Downstream 100 bases:

>100_bases
GTATATTCTTTTTTAAAGTAAATGTTGGGTGTCGCAAGCTCCACCCAACCTACAAGTTAGACATTTTTCAGACTTAAGAT
AATTACCATTAACCTAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQYRRYYQKGATYFFTVNLADRSSDLLVKEIATLRHAFKLVKQKYPFYIDAIVILPDHLHMLCTMPNNDADFSKRIKLIK
YYFSYNIAKTESISSSRLKKSERGIWQRRFWEHCIRDESDYRAHIDYIHMNPIKHGYVKQAKDWQYSSFHRFVTDGLLPI
NWGG

Sequences:

>Translated_164_residues
MQYRRYYQKGATYFFTVNLADRSSDLLVKEIATLRHAFKLVKQKYPFYIDAIVILPDHLHMLCTMPNNDADFSKRIKLIK
YYFSYNIAKTESISSSRLKKSERGIWQRRFWEHCIRDESDYRAHIDYIHMNPIKHGYVKQAKDWQYSSFHRFVTDGLLPI
NWGG
>Mature_164_residues
MQYRRYYQKGATYFFTVNLADRSSDLLVKEIATLRHAFKLVKQKYPFYIDAIVILPDHLHMLCTMPNNDADFSKRIKLIK
YYFSYNIAKTESISSSRLKKSERGIWQRRFWEHCIRDESDYRAHIDYIHMNPIKHGYVKQAKDWQYSSFHRFVTDGLLPI
NWGG

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0217 [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=163, Percent_Identity=49.6932515337423, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19727; Mature: 19727

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYRRYYQKGATYFFTVNLADRSSDLLVKEIATLRHAFKLVKQKYPFYIDAIVILPDHLH
CCHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEE
MLCTMPNNDADFSKRIKLIKYYFSYNIAKTESISSSRLKKSERGIWQRRFWEHCIRDESD
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCC
YRAHIDYIHMNPIKHGYVKQAKDWQYSSFHRFVTDGLLPINWGG
CEEEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHCCCEEECCCC
>Mature Secondary Structure
MQYRRYYQKGATYFFTVNLADRSSDLLVKEIATLRHAFKLVKQKYPFYIDAIVILPDHLH
CCHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEE
MLCTMPNNDADFSKRIKLIKYYFSYNIAKTESISSSRLKKSERGIWQRRFWEHCIRDESD
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCC
YRAHIDYIHMNPIKHGYVKQAKDWQYSSFHRFVTDGLLPINWGG
CEEEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]