Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006785
Identifier: 93006785
GI number: 93006785
Start: 2422557
End: 2423573
Strand: Direct
Name: 93006785
Synonym: Pcryo_1961
Alternate gene names: NA
Gene position: 2422557-2423573 (Clockwise)
Preceding gene: 93006784
Following gene: 93006786
Centisome position: 79.17
GC content: 39.72
Gene sequence:
>1017_bases ATGGCTCTAATTAACTGTCCTGAATGTTCTAAAGCCATTAGTGATCAAAGTATCTCTTGTCCTAGTTGTGGTTTCCCCAC GCCTTCAGAACAGATAGATAACAATGATTTGCTAGCAAGCAGTCGTCAAAGACAAAAGAATAGTGGCTGTTCTGGCGCAA CTATCTTCCTAATCATTATTATAGTTCTTATCGGCTTTTGGCTTGTAAGTGCTTATGATGGCTATACAGAAAAAGCACGA CAATACAGTGAAGAGCAGTCAGAACCTGATAAAGAATCACCGCAAGTCCAGGGATCATTATTTGATTCGCCATTGACACA GATACCAATGTTACTTTCTGGTTCAGGTGAAGATGGTCGCTATTTCCTCATCTCTCACTTTGCATCTTATGGCATTGAAA ATGTTAAGTATGCACGTAGAGGGAAAGAAAGTGACTCTTTTGGGGAGATGCAAATTGACTGCACAAACGGTAAGATCAGA AAAACCTCATCAGATAATCTTGAGGCCTTAACATCAGCAGACCTAGGGGATTGGTATACGCCAACACCAGATTGGACAGA TCAAGATATTGTTAATTTCATATGTCCAATCGAAAGCGTAGTGTCAAAAAACATAGAACATCATGAAGTAGTTGAGAAAG TAGTAACGCTAGAAGCTCCCAAGAACGAAGTAATTGAAAAAGTAACATTGGAGCAATTCAAGCCAGAGCCAGTGATATCA GCACAAGCAATACCGAGGGAAGTTGTATTATCGAATGCCCCTTCGGGTAGTGAGAAAGAATATAAAGTATGGGAACCACC AATAAAAACAAAAGAACCTTACAACGAAAAAGTAGTTAATAAAGCAGCGGACGATAAAAAAGAGAGGGACATAGCACGCA GAAAAAGTGATGATCGAGCAATATGTGAACAAGCTATAAAAGTAAACAGTGCTTACCTTGGGAAGGACGACCCAGAATAT AGTCAGTGGAAGGCAATTGAGCGTGCCAATTGTATGCAAGATAAACTATATGAGTGA
Upstream 100 bases:
>100_bases TAATCTTTATCTTATTTACCAAAAATTTAAGCAACTTTCTAGTACTTAACCTTGCAGAAATGTGCTCGGGATATTGCAAA TGAAGATAAAGTAGAAAAAA
Downstream 100 bases:
>100_bases AATTAGGGGATACAAATTCGGTGTTATTTGCAAGCTCGTAGGTTGGGTTGACGAAGGAAACCCAACTGTCTCATATTCAT CAAAACCAACTCGTTAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MALINCPECSKAISDQSISCPSCGFPTPSEQIDNNDLLASSRQRQKNSGCSGATIFLIIIIVLIGFWLVSAYDGYTEKAR QYSEEQSEPDKESPQVQGSLFDSPLTQIPMLLSGSGEDGRYFLISHFASYGIENVKYARRGKESDSFGEMQIDCTNGKIR KTSSDNLEALTSADLGDWYTPTPDWTDQDIVNFICPIESVVSKNIEHHEVVEKVVTLEAPKNEVIEKVTLEQFKPEPVIS AQAIPREVVLSNAPSGSEKEYKVWEPPIKTKEPYNEKVVNKAADDKKERDIARRKSDDRAICEQAIKVNSAYLGKDDPEY SQWKAIERANCMQDKLYE
Sequences:
>Translated_338_residues MALINCPECSKAISDQSISCPSCGFPTPSEQIDNNDLLASSRQRQKNSGCSGATIFLIIIIVLIGFWLVSAYDGYTEKAR QYSEEQSEPDKESPQVQGSLFDSPLTQIPMLLSGSGEDGRYFLISHFASYGIENVKYARRGKESDSFGEMQIDCTNGKIR KTSSDNLEALTSADLGDWYTPTPDWTDQDIVNFICPIESVVSKNIEHHEVVEKVVTLEAPKNEVIEKVTLEQFKPEPVIS AQAIPREVVLSNAPSGSEKEYKVWEPPIKTKEPYNEKVVNKAADDKKERDIARRKSDDRAICEQAIKVNSAYLGKDDPEY SQWKAIERANCMQDKLYE >Mature_337_residues ALINCPECSKAISDQSISCPSCGFPTPSEQIDNNDLLASSRQRQKNSGCSGATIFLIIIIVLIGFWLVSAYDGYTEKARQ YSEEQSEPDKESPQVQGSLFDSPLTQIPMLLSGSGEDGRYFLISHFASYGIENVKYARRGKESDSFGEMQIDCTNGKIRK TSSDNLEALTSADLGDWYTPTPDWTDQDIVNFICPIESVVSKNIEHHEVVEKVVTLEAPKNEVIEKVTLEQFKPEPVISA QAIPREVVLSNAPSGSEKEYKVWEPPIKTKEPYNEKVVNKAADDKKERDIARRKSDDRAICEQAIKVNSAYLGKDDPEYS QWKAIERANCMQDKLYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37882; Mature: 37750
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALINCPECSKAISDQSISCPSCGFPTPSEQIDNNDLLASSRQRQKNSGCSGATIFLIII CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHH IVLIGFWLVSAYDGYTEKARQYSEEQSEPDKESPQVQGSLFDSPLTQIPMLLSGSGEDGR HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHCCHHEECCCCCCC YFLISHFASYGIENVKYARRGKESDSFGEMQIDCTNGKIRKTSSDNLEALTSADLGDWYT CHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEECCCEEECCCCCCHHHHHHCCCCCCCC PTPDWTDQDIVNFICPIESVVSKNIEHHEVVEKVVTLEAPKNEVIEKVTLEQFKPEPVIS CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC AQAIPREVVLSNAPSGSEKEYKVWEPPIKTKEPYNEKVVNKAADDKKERDIARRKSDDRA HHHCCHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH ICEQAIKVNSAYLGKDDPEYSQWKAIERANCMQDKLYE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALINCPECSKAISDQSISCPSCGFPTPSEQIDNNDLLASSRQRQKNSGCSGATIFLIII CCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHH IVLIGFWLVSAYDGYTEKARQYSEEQSEPDKESPQVQGSLFDSPLTQIPMLLSGSGEDGR HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHCCHHEECCCCCCC YFLISHFASYGIENVKYARRGKESDSFGEMQIDCTNGKIRKTSSDNLEALTSADLGDWYT CHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEECCCEEECCCCCCHHHHHHCCCCCCCC PTPDWTDQDIVNFICPIESVVSKNIEHHEVVEKVVTLEAPKNEVIEKVTLEQFKPEPVIS CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC AQAIPREVVLSNAPSGSEKEYKVWEPPIKTKEPYNEKVVNKAADDKKERDIARRKSDDRA HHHCCHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH ICEQAIKVNSAYLGKDDPEYSQWKAIERANCMQDKLYE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA