Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006687
Identifier: 93006687
GI number: 93006687
Start: 2300761
End: 2302038
Strand: Direct
Name: 93006687
Synonym: Pcryo_1863
Alternate gene names: NA
Gene position: 2300761-2302038 (Clockwise)
Preceding gene: 93006685
Following gene: 93006689
Centisome position: 75.19
GC content: 44.37
Gene sequence:
>1278_bases ATGACGACTATTTCACCGACACGGGTGTCGATGTATGATTTTCTATATCAAGATACCAAGCCATTGGTGTCATTATTAGC AGATGCAGCAGCGCTGTCATTGCCGCAAGCGCGTTTGGCAATGGATGCCAGCTTGCAAGCGATTATCAGCGCTCTTCTCG CTTATCAGCAGCGCCATCAAGGACAAGCTCTAAGCAAAAAGCTATTTGGTCGCAGTGCCGTCAAAGAAATGCGCCAGTAC AATTCTATGAATTTTGCCACTCTAAATACAACGTTATACCATCGCCATGATGCCGCCGATGCGATATTCCATGATAATGC ACGGGTGAGCAAAGCCAGTGAGTATATTGCAGCACAGATTGACGCGACAGCGCCACAAGTACAAATTTTGCTTACTACCC TATGCGTCATTGTGCTACGTGAGCTTGCTATTTTGGTTGAGTATAGCCAACTTGATCATGATGAGGTGAATAAATGGTTC GCCTTACAGCCACAATTTTTGTCCAAAGCGCGTTTTGCTATCCCTGTCTTAAATTTAGCTGTTAACGAATCAGCTGATCA TAGCGATGAGGCGCAAATCATATTGTCAGCAGTAGAAGCGGTAAAAATAGAGTCAGTAGCTAGCGACGAGCGTTACTTAT TAATCGCTGAGCAATTGACAGATAACCCGCCAGCTTTTGATCCTTACTGGTATGAGCTGACAGCATTCATACCCGAACAA TTTGAGCCAGTAAAAGACATGCAGTTAGCGACTGGTAACTACTTAAAAGCCATTGGACGCTCAGCTGAAAACATTCAACA AGGTAAACACAATGACTTATTGATGTTTGCACCGATGACGGCTATTGGCTTGCCACATCAACGCTGGCTAGTACAACTGG CTAAAATATCAGAGATATATTTGCAGCGTAATCGATTACGCATTACTTCTGAACCTATCAACCCACCAAAGCCGCCGTTG GTTAGCTCAGGATTGCTGAGCAGTAATAGCAACAATGATAATACACCAAGCACCCTTAGCGAAAAGCCGATTGAATACGA GGCATCAGTCCCCCTATGGAAAAATCCCGTCATTCTGCTGATTATTCTCGTGATTGGTGGGCTTGGAATATTGGCAACCA TCAAGTATCAAACGCAAAAAGCCAACGGCGTCGTACTTGCTACCAATGAAGTGTTAGCGCAAGACTCTGAAACGGAAGAG CGGAAACAGCAAGATGTGGCTATCGTTATGGTAGACGATGATATCGCTGCTGATGATAAAAAGTCAAAAGCTGAATGA
Upstream 100 bases:
>100_bases ATAGCAGCATAAAAATGAGTGAGTCTTTCTATTATCAAGGGATTGTATCAAGACATTTGACACCGTAATATAGGGGCACA CTTTTTGATGCTAGCAGATT
Downstream 100 bases:
>100_bases CAAAGCCGCGCCTGAAAATAGTGTAATAAAAACCTATCAGCAATAAAAAAAGAGGCGCTATATAAATAGCGACTCTTTTT TATCGGTCAGTTAATTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTTISPTRVSMYDFLYQDTKPLVSLLADAAALSLPQARLAMDASLQAIISALLAYQQRHQGQALSKKLFGRSAVKEMRQY NSMNFATLNTTLYHRHDAADAIFHDNARVSKASEYIAAQIDATAPQVQILLTTLCVIVLRELAILVEYSQLDHDEVNKWF ALQPQFLSKARFAIPVLNLAVNESADHSDEAQIILSAVEAVKIESVASDERYLLIAEQLTDNPPAFDPYWYELTAFIPEQ FEPVKDMQLATGNYLKAIGRSAENIQQGKHNDLLMFAPMTAIGLPHQRWLVQLAKISEIYLQRNRLRITSEPINPPKPPL VSSGLLSSNSNNDNTPSTLSEKPIEYEASVPLWKNPVILLIILVIGGLGILATIKYQTQKANGVVLATNEVLAQDSETEE RKQQDVAIVMVDDDIAADDKKSKAE
Sequences:
>Translated_425_residues MTTISPTRVSMYDFLYQDTKPLVSLLADAAALSLPQARLAMDASLQAIISALLAYQQRHQGQALSKKLFGRSAVKEMRQY NSMNFATLNTTLYHRHDAADAIFHDNARVSKASEYIAAQIDATAPQVQILLTTLCVIVLRELAILVEYSQLDHDEVNKWF ALQPQFLSKARFAIPVLNLAVNESADHSDEAQIILSAVEAVKIESVASDERYLLIAEQLTDNPPAFDPYWYELTAFIPEQ FEPVKDMQLATGNYLKAIGRSAENIQQGKHNDLLMFAPMTAIGLPHQRWLVQLAKISEIYLQRNRLRITSEPINPPKPPL VSSGLLSSNSNNDNTPSTLSEKPIEYEASVPLWKNPVILLIILVIGGLGILATIKYQTQKANGVVLATNEVLAQDSETEE RKQQDVAIVMVDDDIAADDKKSKAE >Mature_424_residues TTISPTRVSMYDFLYQDTKPLVSLLADAAALSLPQARLAMDASLQAIISALLAYQQRHQGQALSKKLFGRSAVKEMRQYN SMNFATLNTTLYHRHDAADAIFHDNARVSKASEYIAAQIDATAPQVQILLTTLCVIVLRELAILVEYSQLDHDEVNKWFA LQPQFLSKARFAIPVLNLAVNESADHSDEAQIILSAVEAVKIESVASDERYLLIAEQLTDNPPAFDPYWYELTAFIPEQF EPVKDMQLATGNYLKAIGRSAENIQQGKHNDLLMFAPMTAIGLPHQRWLVQLAKISEIYLQRNRLRITSEPINPPKPPLV SSGLLSSNSNNDNTPSTLSEKPIEYEASVPLWKNPVILLIILVIGGLGILATIKYQTQKANGVVLATNEVLAQDSETEER KQQDVAIVMVDDDIAADDKKSKAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47210; Mature: 47079
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTISPTRVSMYDFLYQDTKPLVSLLADAAALSLPQARLAMDASLQAIISALLAYQQRHQ CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC GQALSKKLFGRSAVKEMRQYNSMNFATLNTTLYHRHDAADAIFHDNARVSKASEYIAAQI CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHCC DATAPQVQILLTTLCVIVLRELAILVEYSQLDHDEVNKWFALQPQFLSKARFAIPVLNLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCHHHHHHHHHHHHHHHEE VNESADHSDEAQIILSAVEAVKIESVASDERYLLIAEQLTDNPPAFDPYWYELTAFIPEQ ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCHHHHHEECCCHH FEPVKDMQLATGNYLKAIGRSAENIQQGKHNDLLMFAPMTAIGLPHQRWLVQLAKISEIY CCCHHHHHHHCCHHHHHHCCCHHHHHCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHH LQRNRLRITSEPINPPKPPLVSSGLLSSNSNNDNTPSTLSEKPIEYEASVPLWKNPVILL HHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHH IILVIGGLGILATIKYQTQKANGVVLATNEVLAQDSETEERKQQDVAIVMVDDDIAADDK HHHHHCCCHHEEEEEEEECCCCCEEEEEHHHHHCCCCHHHHHHCCEEEEEECCCCCCCCC KSKAE CCCCC >Mature Secondary Structure TTISPTRVSMYDFLYQDTKPLVSLLADAAALSLPQARLAMDASLQAIISALLAYQQRHQ CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC GQALSKKLFGRSAVKEMRQYNSMNFATLNTTLYHRHDAADAIFHDNARVSKASEYIAAQI CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHCC DATAPQVQILLTTLCVIVLRELAILVEYSQLDHDEVNKWFALQPQFLSKARFAIPVLNLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCHHHHHHHHHHHHHHHEE VNESADHSDEAQIILSAVEAVKIESVASDERYLLIAEQLTDNPPAFDPYWYELTAFIPEQ ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCHHHHHEECCCHH FEPVKDMQLATGNYLKAIGRSAENIQQGKHNDLLMFAPMTAIGLPHQRWLVQLAKISEIY CCCHHHHHHHCCHHHHHHCCCHHHHHCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHH LQRNRLRITSEPINPPKPPLVSSGLLSSNSNNDNTPSTLSEKPIEYEASVPLWKNPVILL HHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHH IILVIGGLGILATIKYQTQKANGVVLATNEVLAQDSETEERKQQDVAIVMVDDDIAADDK HHHHHCCCHHEEEEEEEECCCCCEEEEEHHHHHCCCCHHHHHHCCEEEEEECCCCCCCCC KSKAE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA