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The map label for this gene is ygiF [C]

Identifier: 93006685

GI number: 93006685

Start: 2298277

End: 2299833

Strand: Direct

Name: ygiF [C]

Synonym: Pcryo_1861

Alternate gene names: 93006685

Gene position: 2298277-2299833 (Clockwise)

Preceding gene: 93006684

Following gene: 93006687

Centisome position: 75.11

GC content: 41.43

Gene sequence:

>1557_bases
ATGCAAGAAATAGAGCTGAAATTCTTGGTACCAGAGTCGCGATTAAAGGGTCTTATGCGCCAAGCGAAAGTCAAATCATC
ACAAGTAACACAACTGGCTGCGCATTATTATGACACCCCTGACCAGCAGCTTGCACAGGCTGGTATTGGCCTGCGTATTC
GTCAGGAGGGTGATGCTTGGGTGCAAACTATCAAAGCGGGTGGCGATGGTATTGCAGCGCGCCTAGAGCACAATGCCACA
TTAGATAATGAGCAGGTACAAAACATGCTCGAAAATAACGCGCTGATGCCTGATTTAACGATTTATAAAGATAGCCTTAT
TGCCCCAGCATTGACAGATTTTAAGCTCAAAAAACTGGCTAAAAAACTGACCCGTTTATATGTGACTGATGTAGAGCGTA
CTACCCGCTTATTGATAGAAGATACGAGCGATGAAGTCGTTAACAGTATTGAGATGGCTTACGACTATGGAGAAATTATC
CATGGTACTGATGATACTCAAAGAGATGCCATTCAAGAAGTTGAATTTGAGCTCATAGCAGGTGAGTTAGATTTTTTATT
TACGACGGCTAAAACATGGTGTCAGCGTCATAAACTGTGCCTTTCTACCGTCACTAAAGCCGAGCGTGGTGGCTTACTTA
TTAAGGGACAAAATTATAGCTCAGCCACTGCTGCTGACTTGAGCACCCTTAGTATCAATAAAAAAATCACTATGCCTGCT
TTTTTACGCGCTGTCGTGCATAACTGCTTATTGCAAATACTCCCAAATAGCAGCGCCATCGTGGCAGGCAGTAAAGACAA
TGATCACATTTTACAGCTATCTATCGGTATAGAGCGCTTGCACACTGTACTACAAGCATTTGATAGCTTCTCAGATGAAA
TCAATCCGGATTGGTCAGCCATACTGCAACAAACTGCTACTTTACTCGCTGATTATCGTAAGCTTGCTCATCTTAGTAAT
CATATTGAACCAATGTTACAACAGCACGGTGCACCTATCGTTGATTGGACAGCGGATATTGATGCTATCAAAATTACACC
AGTGACTGCAATCAGTGCTAACGACTTCCAGATCATGTTGCTTGAGCTCATCGCCTTTACTATGAGCGACCCTAGTCTTG
AGCCTCAAACAGATAAGCTGGCTATCAATAAGCTTGAAAAAGTACTTATTAAATACTATGACAAATTACTTGAAGCTGAG
CAATATTTAGAGGACAGCTATGATGATTCAGATAGTGAGTTAGAGAAAGAATCCATCATAAAAGCATTGCATAACCTACA
TGCTCATCTAAAAAATCTATGTTCTATCAGCGAATTAGTAGCACCTTTGTATAGCAAAAAGAAAACCAAGCGCTGGCTAA
AACGTGCCGTAAAAGCACAGAAAGCACTGGGTCAACAGCTCAATATGATTGACTGTCAGCAGTACTATCAATGTAAAGCC
AGCTCTGACTCTGCTGCTTTATATGCGGCAGGCTGGTTAAATGCTGCTTCGATACCAATCGAAAAAGCCACAGAAAAACA
TTTGGATAAATTTTATGATTGCTCTGTATTTTGGTAA

Upstream 100 bases:

>100_bases
CTCGATTTAGCCAACCAAAACGAAAGTTTTACTTGTTATTCACTGATAGCTTTCATACGATGGTAATAATATAAATTTAT
TAAAACAATCAGGAGCCATC

Downstream 100 bases:

>100_bases
TTGAGTATATTGTCATTTTATGTTTATCAATATTAGAGAAAAAGACAGCTCACTGAATAAGGGTTGTCTTTTTTATATCG
TCGACTCAATTTATAATCCA

Product: adenylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MQEIELKFLVPESRLKGLMRQAKVKSSQVTQLAAHYYDTPDQQLAQAGIGLRIRQEGDAWVQTIKAGGDGIAARLEHNAT
LDNEQVQNMLENNALMPDLTIYKDSLIAPALTDFKLKKLAKKLTRLYVTDVERTTRLLIEDTSDEVVNSIEMAYDYGEII
HGTDDTQRDAIQEVEFELIAGELDFLFTTAKTWCQRHKLCLSTVTKAERGGLLIKGQNYSSATAADLSTLSINKKITMPA
FLRAVVHNCLLQILPNSSAIVAGSKDNDHILQLSIGIERLHTVLQAFDSFSDEINPDWSAILQQTATLLADYRKLAHLSN
HIEPMLQQHGAPIVDWTADIDAIKITPVTAISANDFQIMLLELIAFTMSDPSLEPQTDKLAINKLEKVLIKYYDKLLEAE
QYLEDSYDDSDSELEKESIIKALHNLHAHLKNLCSISELVAPLYSKKKTKRWLKRAVKAQKALGQQLNMIDCQQYYQCKA
SSDSAALYAAGWLNAASIPIEKATEKHLDKFYDCSVFW

Sequences:

>Translated_518_residues
MQEIELKFLVPESRLKGLMRQAKVKSSQVTQLAAHYYDTPDQQLAQAGIGLRIRQEGDAWVQTIKAGGDGIAARLEHNAT
LDNEQVQNMLENNALMPDLTIYKDSLIAPALTDFKLKKLAKKLTRLYVTDVERTTRLLIEDTSDEVVNSIEMAYDYGEII
HGTDDTQRDAIQEVEFELIAGELDFLFTTAKTWCQRHKLCLSTVTKAERGGLLIKGQNYSSATAADLSTLSINKKITMPA
FLRAVVHNCLLQILPNSSAIVAGSKDNDHILQLSIGIERLHTVLQAFDSFSDEINPDWSAILQQTATLLADYRKLAHLSN
HIEPMLQQHGAPIVDWTADIDAIKITPVTAISANDFQIMLLELIAFTMSDPSLEPQTDKLAINKLEKVLIKYYDKLLEAE
QYLEDSYDDSDSELEKESIIKALHNLHAHLKNLCSISELVAPLYSKKKTKRWLKRAVKAQKALGQQLNMIDCQQYYQCKA
SSDSAALYAAGWLNAASIPIEKATEKHLDKFYDCSVFW
>Mature_518_residues
MQEIELKFLVPESRLKGLMRQAKVKSSQVTQLAAHYYDTPDQQLAQAGIGLRIRQEGDAWVQTIKAGGDGIAARLEHNAT
LDNEQVQNMLENNALMPDLTIYKDSLIAPALTDFKLKKLAKKLTRLYVTDVERTTRLLIEDTSDEVVNSIEMAYDYGEII
HGTDDTQRDAIQEVEFELIAGELDFLFTTAKTWCQRHKLCLSTVTKAERGGLLIKGQNYSSATAADLSTLSINKKITMPA
FLRAVVHNCLLQILPNSSAIVAGSKDNDHILQLSIGIERLHTVLQAFDSFSDEINPDWSAILQQTATLLADYRKLAHLSN
HIEPMLQQHGAPIVDWTADIDAIKITPVTAISANDFQIMLLELIAFTMSDPSLEPQTDKLAINKLEKVLIKYYDKLLEAE
QYLEDSYDDSDSELEKESIIKALHNLHAHLKNLCSISELVAPLYSKKKTKRWLKRAVKAQKALGQQLNMIDCQQYYQCKA
SSDSAALYAAGWLNAASIPIEKATEKHLDKFYDCSVFW

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiF [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=226, Percent_Identity=29.646017699115, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 58171; Mature: 58171

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIELKFLVPESRLKGLMRQAKVKSSQVTQLAAHYYDTPDQQLAQAGIGLRIRQEGDAW
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCHHH
VQTIKAGGDGIAARLEHNATLDNEQVQNMLENNALMPDLTIYKDSLIAPALTDFKLKKLA
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KKLTRLYVTDVERTTRLLIEDTSDEVVNSIEMAYDYGEIIHGTDDTQRDAIQEVEFELIA
HHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GELDFLFTTAKTWCQRHKLCLSTVTKAERGGLLIKGQNYSSATAADLSTLSINKKITMPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHEECCCCCCHHH
FLRAVVHNCLLQILPNSSAIVAGSKDNDHILQLSIGIERLHTVLQAFDSFSDEINPDWSA
HHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHH
ILQQTATLLADYRKLAHLSNHIEPMLQQHGAPIVDWTADIDAIKITPVTAISANDFQIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEECCCCHHHHH
LELIAFTMSDPSLEPQTDKLAINKLEKVLIKYYDKLLEAEQYLEDSYDDSDSELEKESII
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KALHNLHAHLKNLCSISELVAPLYSKKKTKRWLKRAVKAQKALGQQLNMIDCQQYYQCKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
SSDSAALYAAGWLNAASIPIEKATEKHLDKFYDCSVFW
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQEIELKFLVPESRLKGLMRQAKVKSSQVTQLAAHYYDTPDQQLAQAGIGLRIRQEGDAW
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCHHH
VQTIKAGGDGIAARLEHNATLDNEQVQNMLENNALMPDLTIYKDSLIAPALTDFKLKKLA
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KKLTRLYVTDVERTTRLLIEDTSDEVVNSIEMAYDYGEIIHGTDDTQRDAIQEVEFELIA
HHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GELDFLFTTAKTWCQRHKLCLSTVTKAERGGLLIKGQNYSSATAADLSTLSINKKITMPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHEECCCCCCHHH
FLRAVVHNCLLQILPNSSAIVAGSKDNDHILQLSIGIERLHTVLQAFDSFSDEINPDWSA
HHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHH
ILQQTATLLADYRKLAHLSNHIEPMLQQHGAPIVDWTADIDAIKITPVTAISANDFQIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEECCCCHHHHH
LELIAFTMSDPSLEPQTDKLAINKLEKVLIKYYDKLLEAEQYLEDSYDDSDSELEKESII
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KALHNLHAHLKNLCSISELVAPLYSKKKTKRWLKRAVKAQKALGQQLNMIDCQQYYQCKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
SSDSAALYAAGWLNAASIPIEKATEKHLDKFYDCSVFW
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]