Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006675
Identifier: 93006675
GI number: 93006675
Start: 2286205
End: 2286867
Strand: Direct
Name: 93006675
Synonym: Pcryo_1851
Alternate gene names: NA
Gene position: 2286205-2286867 (Clockwise)
Preceding gene: 93006672
Following gene: 93006676
Centisome position: 74.72
GC content: 45.1
Gene sequence:
>663_bases ATGGCTCTGTACCCCTACACGCTGCAACCTGTTGCCTTAAACCTAACCGAGGCAGAATTCCATCAAGCACAGTATGAGCT ATTTTCTAGTGCCAGCCCGTCATTTGGTCTGTCGAGTATCAAACTGAAAGAATGGATTATCATGGCCGTCGCTGTGGTTT TAGCCGTTGCTGGACTGGTTTTTTTGACAGGTTATTCGACCATTATTTTTTGGCTGATGCTAGCAGCCGTTGTTATTTAC CTACTGGTTCGTACGCTTGGTTTTAAATGGTATGTGAAAAGAGAGTTTGAAAAGCAAGTCGCTGAGCAAGAAATGCCTGA CGAGATGCGCCAAATGAAACTAGGTGTACAGAAGCATGGTCTGGTAATGGCAGTGCCGGTCAATCAGTCAGATATGTTTA GTAGCAATCAGATGCGCGGTATGCAGATGCGTGCAGGCAGCACCCAACAAGCGGTGATTCCTTGGAGCGCTGTGAAGAGC TGGGATGAGACCGACGACTATATCTTTATGATGTTTGAGATGAAAGGTCAGCAAGGCAGTCAGATTATTCCTAAACGCTT GCAAGCTCAAAAATTCCCTATCGATACAGTACGCCAGCATTTATTAGAAGTAGTAGCAGTGAAAGGTCTGAACTCTGAAA GCTTACAGATACCTGCTAAATAG
Upstream 100 bases:
>100_bases AGCGCATATCTTTATTCTATTTCCAGCCAAATATTACCTTGTTATCGACGTTTGGCGCTTTTAATTTAACGTTTTCACTA TAAGTCTTTGAGAAACCTTT
Downstream 100 bases:
>100_bases GCTTATTGCTTTCTGTTAGACCAAGGATTTAGTTGTTTTATAAAATATATTACAAATTTTAATTTGATTAATTTAACTTA TTTTTGCATGCTTGCTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MALYPYTLQPVALNLTEAEFHQAQYELFSSASPSFGLSSIKLKEWIIMAVAVVLAVAGLVFLTGYSTIIFWLMLAAVVIY LLVRTLGFKWYVKREFEKQVAEQEMPDEMRQMKLGVQKHGLVMAVPVNQSDMFSSNQMRGMQMRAGSTQQAVIPWSAVKS WDETDDYIFMMFEMKGQQGSQIIPKRLQAQKFPIDTVRQHLLEVVAVKGLNSESLQIPAK
Sequences:
>Translated_220_residues MALYPYTLQPVALNLTEAEFHQAQYELFSSASPSFGLSSIKLKEWIIMAVAVVLAVAGLVFLTGYSTIIFWLMLAAVVIY LLVRTLGFKWYVKREFEKQVAEQEMPDEMRQMKLGVQKHGLVMAVPVNQSDMFSSNQMRGMQMRAGSTQQAVIPWSAVKS WDETDDYIFMMFEMKGQQGSQIIPKRLQAQKFPIDTVRQHLLEVVAVKGLNSESLQIPAK >Mature_219_residues ALYPYTLQPVALNLTEAEFHQAQYELFSSASPSFGLSSIKLKEWIIMAVAVVLAVAGLVFLTGYSTIIFWLMLAAVVIYL LVRTLGFKWYVKREFEKQVAEQEMPDEMRQMKLGVQKHGLVMAVPVNQSDMFSSNQMRGMQMRAGSTQQAVIPWSAVKSW DETDDYIFMMFEMKGQQGSQIIPKRLQAQKFPIDTVRQHLLEVVAVKGLNSESLQIPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24962; Mature: 24830
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALYPYTLQPVALNLTEAEFHQAQYELFSSASPSFGLSSIKLKEWIIMAVAVVLAVAGLV CCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FLTGYSTIIFWLMLAAVVIYLLVRTLGFKWYVKREFEKQVAEQEMPDEMRQMKLGVQKHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCC LVMAVPVNQSDMFSSNQMRGMQMRAGSTQQAVIPWSAVKSWDETDDYIFMMFEMKGQQGS EEEEEECCHHHHCCCCCCCCHHCCCCCCCCEEECHHHHHCCCCCCCEEEEEEEECCCCCC QIIPKRLQAQKFPIDTVRQHLLEVVAVKGLNSESLQIPAK CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCC >Mature Secondary Structure ALYPYTLQPVALNLTEAEFHQAQYELFSSASPSFGLSSIKLKEWIIMAVAVVLAVAGLV CCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FLTGYSTIIFWLMLAAVVIYLLVRTLGFKWYVKREFEKQVAEQEMPDEMRQMKLGVQKHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCC LVMAVPVNQSDMFSSNQMRGMQMRAGSTQQAVIPWSAVKSWDETDDYIFMMFEMKGQQGS EEEEEECCHHHHCCCCCCCCHHCCCCCCCCEEECHHHHHCCCCCCCEEEEEEEECCCCCC QIIPKRLQAQKFPIDTVRQHLLEVVAVKGLNSESLQIPAK CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA