Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is yceI [C]
Identifier: 93006672
GI number: 93006672
Start: 2281472
End: 2282074
Strand: Direct
Name: yceI [C]
Synonym: Pcryo_1848
Alternate gene names: 93006672
Gene position: 2281472-2282074 (Clockwise)
Preceding gene: 93006670
Following gene: 93006675
Centisome position: 74.56
GC content: 42.62
Gene sequence:
>603_bases ATGACCACACCTGTCACCTCTTTGCTGAAAATCACACTCAGCAGCTGCCTACTATTATCATTACCAGTCATAGGATTGGC GGCGACCGTTCCGCAAAAATGGAAACTGGACGTCCCAAAGACCAATGTCGAGTTCGAGGTCAATTATTTGGGTAAAGCCA TGACTGACGGCAGGTTCAATAAGGTCAATGGCGCCATCAATTATGACGTCAATAAACCTGCAAGCACGACCATTAATTTT ACCGTTTTTACCAATAGTATCGATACTGATCGCAGCTTGAGAGATTCATTTTTGCGCCGAAAGGAGCTTTTGAATACGAA ACAATATCCGACGATGACTTTTGTTTCTAAAAAAGTCAGCATGATAAATACTAAAGAAGCCAATGTGACCGGTGACTTTA CAGTGTTGGGTCAAACCAAACCTTTGACGGTGAGAGTAACGTTATCAGATGTAGAGAATGATCCTGTCACCTCTAGACCT ACCTTAAAATTTCGCGCGACGGGCTTGGTAGATCGTTACAACTACGGGGTTACTGCTTTTCCAAAAGTGATTAGCAATAT CATCCCGCTTGAGATATCAGGGAAACTGATTGCTGCTAATTAA
Upstream 100 bases:
>100_bases ATTTTAAAAAGAATAGAGCACGGATTAATTACTATAGAACCACTTGAATTAAATTATTTTAACTACTGATATACCTCCTA TTTCTCTTTGGATCAGACAT
Downstream 100 bases:
>100_bases GCTCTGAAAGACTTAAAAGAACATAAAAAAAAGAGTTGCTAGAAATCCTAGCAACTCTTTTTTGTTTGAGCAGTTTTAAA TACTTACACCAAGCTATTCA
Product: YceI protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTTPVTSLLKITLSSCLLLSLPVIGLAATVPQKWKLDVPKTNVEFEVNYLGKAMTDGRFNKVNGAINYDVNKPASTTINF TVFTNSIDTDRSLRDSFLRRKELLNTKQYPTMTFVSKKVSMINTKEANVTGDFTVLGQTKPLTVRVTLSDVENDPVTSRP TLKFRATGLVDRYNYGVTAFPKVISNIIPLEISGKLIAAN
Sequences:
>Translated_200_residues MTTPVTSLLKITLSSCLLLSLPVIGLAATVPQKWKLDVPKTNVEFEVNYLGKAMTDGRFNKVNGAINYDVNKPASTTINF TVFTNSIDTDRSLRDSFLRRKELLNTKQYPTMTFVSKKVSMINTKEANVTGDFTVLGQTKPLTVRVTLSDVENDPVTSRP TLKFRATGLVDRYNYGVTAFPKVISNIIPLEISGKLIAAN >Mature_199_residues TTPVTSLLKITLSSCLLLSLPVIGLAATVPQKWKLDVPKTNVEFEVNYLGKAMTDGRFNKVNGAINYDVNKPASTTINFT VFTNSIDTDRSLRDSFLRRKELLNTKQYPTMTFVSKKVSMINTKEANVTGDFTVLGQTKPLTVRVTLSDVENDPVTSRPT LKFRATGLVDRYNYGVTAFPKVISNIIPLEISGKLIAAN
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=166, Percent_Identity=31.9277108433735, Blast_Score=86, Evalue=1e-18,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 22094; Mature: 21963
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPVTSLLKITLSSCLLLSLPVIGLAATVPQKWKLDVPKTNVEFEVNYLGKAMTDGRFN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCCCCCE KVNGAINYDVNKPASTTINFTVFTNSIDTDRSLRDSFLRRKELLNTKQYPTMTFVSKKVS ECCCEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH MINTKEANVTGDFTVLGQTKPLTVRVTLSDVENDPVTSRPTLKFRATGLVDRYNYGVTAF EEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCEEECCCCCCCHH PKVISNIIPLEISGKLIAAN HHHHHCCCCEEECCEEEECC >Mature Secondary Structure TTPVTSLLKITLSSCLLLSLPVIGLAATVPQKWKLDVPKTNVEFEVNYLGKAMTDGRFN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCCCCCE KVNGAINYDVNKPASTTINFTVFTNSIDTDRSLRDSFLRRKELLNTKQYPTMTFVSKKVS ECCCEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH MINTKEANVTGDFTVLGQTKPLTVRVTLSDVENDPVTSRPTLKFRATGLVDRYNYGVTAF EEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCEEECCCCCCCHH PKVISNIIPLEISGKLIAAN HHHHHCCCCEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA