Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93006650
Identifier: 93006650
GI number: 93006650
Start: 2254961
End: 2255464
Strand: Direct
Name: 93006650
Synonym: Pcryo_1826
Alternate gene names: NA
Gene position: 2254961-2255464 (Clockwise)
Preceding gene: 93006649
Following gene: 93006651
Centisome position: 73.69
GC content: 38.69
Gene sequence:
>504_bases ATGTCTATCTGTCAGCCTTTTGCCCCCAAAATTCAAGGAATGCTCCTTATGACAATGGAACGTTTGTTTTCCGGGCTGAT GGCACTGGTCAGTATATTCTTAATATACTTAGCCATTGGTTATGTTGCCCCTATTGCTTATGACCCAATTGGTCCTCGTC CTTACCCTATTTTAATCTTTTCACTGCTTGCCTTTGGCTGCTTAGTCGTTGCTTTTCGTCCCGCCAGTTTTACTAAAGCG ATTGAATTGGGTTTAAACAAAACGATCATCCGTAATCTTATTTTATGTGCGCTTGCCTTATTGGTCTATGGTCTCATTTT TGAAGTATTGGGCTTTATTCTTGCCACTATTCTGATGTCTTTCGCCGTAGGTTTACTTTTTGCCGGTAATCCTCTAAAGA GTTTTATCTTTTCAGTGTTAATCAGTATTGGTTTATATGTCTTATTTGACCTATTTTTAGATGTCAAATTACCACTCGGA TTGTTGTCAGGGATAATAGGATAG
Upstream 100 bases:
>100_bases GTCTTGTTGAAGCAGCACCAACCAAATAGTTACGTTAAGATTTAATAACCTTTAGCAATTGAATATCAAATGTTTTGGTA TTTCTCAAAGGGCTGGCAGG
Downstream 100 bases:
>100_bases CCAATATGGATACTTTTGATTTTTTGATGCATGGCTTTGCTGTTGCATCTACCCCAAAAAACTTACTGCTTGCACTGATC GGCGCTTTTTTAGGTACGAT
Product: membrane protein TctB
Products: NA
Alternate protein names: Tricarboxylate Transport Protein TctB; TctB Protein; Tricarboxylic Transport; Inner Membrane; Inner Membrane Protein; Transporter-Like Membrane Protein
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSICQPFAPKIQGMLLMTMERLFSGLMALVSIFLIYLAIGYVAPIAYDPIGPRPYPILIFSLLAFGCLVVAFRPASFTKA IELGLNKTIIRNLILCALALLVYGLIFEVLGFILATILMSFAVGLLFAGNPLKSFIFSVLISIGLYVLFDLFLDVKLPLG LLSGIIG
Sequences:
>Translated_167_residues MSICQPFAPKIQGMLLMTMERLFSGLMALVSIFLIYLAIGYVAPIAYDPIGPRPYPILIFSLLAFGCLVVAFRPASFTKA IELGLNKTIIRNLILCALALLVYGLIFEVLGFILATILMSFAVGLLFAGNPLKSFIFSVLISIGLYVLFDLFLDVKLPLG LLSGIIG >Mature_166_residues SICQPFAPKIQGMLLMTMERLFSGLMALVSIFLIYLAIGYVAPIAYDPIGPRPYPILIFSLLAFGCLVVAFRPASFTKAI ELGLNKTIIRNLILCALALLVYGLIFEVLGFILATILMSFAVGLLFAGNPLKSFIFSVLISIGLYVLFDLFLDVKLPLGL LSGIIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18154; Mature: 18023
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSICQPFAPKIQGMLLMTMERLFSGLMALVSIFLIYLAIGYVAPIAYDPIGPRPYPILIF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SLLAFGCLVVAFRPASFTKAIELGLNKTIIRNLILCALALLVYGLIFEVLGFILATILMS HHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVGLLFAGNPLKSFIFSVLISIGLYVLFDLFLDVKLPLGLLSGIIG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SICQPFAPKIQGMLLMTMERLFSGLMALVSIFLIYLAIGYVAPIAYDPIGPRPYPILIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SLLAFGCLVVAFRPASFTKAIELGLNKTIIRNLILCALALLVYGLIFEVLGFILATILMS HHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVGLLFAGNPLKSFIFSVLISIGLYVLFDLFLDVKLPLGLLSGIIG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA