Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006651
Identifier: 93006651
GI number: 93006651
Start: 2255470
End: 2256972
Strand: Direct
Name: 93006651
Synonym: Pcryo_1827
Alternate gene names: NA
Gene position: 2255470-2256972 (Clockwise)
Preceding gene: 93006650
Following gene: 93006652
Centisome position: 73.71
GC content: 44.64
Gene sequence:
>1503_bases ATGGATACTTTTGATTTTTTGATGCATGGCTTTGCTGTTGCATCTACCCCAAAAAACTTACTGCTTGCACTGATCGGCGC TTTTTTAGGTACGATTGTTGGCATGTTGCCGGGTCTGGGCCCGATTAATGGTGTAGCGATATTACTGCCTTTTGCTTTTG CACTTGGTTTGCCGCCTGAAAGTGCGCTCATTCTGCTTGCAGCCGTGTATCTTGGCTGTGAATATGGTGGTCGTATTTCT GCCATTCTCATTAATGTACCCGGTGATGCCGGCGCTATTATGACGACTTTGGATGGCTATCCATTGGCAAAACAAGGCAA AGCTGGTATTGCACTGTCTTTATCTGCTGTCAGCTCTTTCGTTGGTGCCACTATCGCGACAATCGGCGTGGTGCTATTTG CGCCGTTATTAGCCAAATGGGCAATCTCATTTGGACCTGCTGAATATTTTGTATTGATGGTGTTTGCTATCACATGCTTA AGTGGTCTAGTAGGTGATCAACCAGTTAAGACGGGTATTGCCGCATTAATTGGTCTTGGTCTAGCAACCGTTGGTGTCGA TGCAGTTACGGGTATTTATCGCTTTACCTTTGATTCGGTCAACCTGTCTGATGGTATTCAATTTACTACCATTGTTATTG GTTTCTTTAGTGTGAGTGAAATTCTAATCTTGCTCGAAAAAACCACGACAGGTCATAAGGTTATTGAACAAGGTAAGCGC AGTCTCTTAAACTTCAAAGAGTTTACTTTTGCTTTTGGAGCCATGCTACGTAGTGGTCTCATGGGCTTTGTCGTTGGTAT CTTACCAGGTGCAGGCGCAACGATTGCCAGTGCTATGACTTATGCCAGTGAACGTAAAATCGCTGGTGATACCGGTACTT TTGGTGACGGGGATCTTCGCGGTGTTGCCTCACCAGAAGCAGCAAATAATGCCTCAGCTTGTGGCTCATTTGTGCCAATG TTGACGCTAGGTGTGCCGGGTTCTGGTACGACAGCAGTCATGATGGGTGCATTGACGTTATATAACATCACACCGGGTCC GCAGTTATTTACTGAGCAGCCAGATATCGTATGGGGTCTGATTGCCTCACTATTTATCTGTAACGTGATTTTGCTAATCA TGAACATCCCTTTGGTGGGTTTGTTCGCCAAACTGCTTGACGTGCCGAACTATATCTTGATACCAGCCATTGCTGCGGTC AGTTTCGTTGGCGTATATTCTATCCATAGCACGACCTTTGACTTGGTCTTTATGGTGGCACTTGGTGTATTTGGTTACTT CTTACGTAAACTAAACTTCCCTTTATCAGCGCTTATTTTGGGCTATGTATTGGGTGAGCTCATGGAGTCTAACTTAAGAC GTGCCCTGTCTATCTCTCAAGGCGAGCTTAGTATTTTATGGAGCAGCCCTATCACAGTAGTGCTATGGTTGTTGGCTATT TTGATGATATTCATGCCTGTCATACGTAGTATCTACCGTAGAAAATTTAAGCCTGCTATTTAA
Upstream 100 bases:
>100_bases TTTCAGTGTTAATCAGTATTGGTTTATATGTCTTATTTGACCTATTTTTAGATGTCAAATTACCACTCGGATTGTTGTCA GGGATAATAGGATAGCCAAT
Downstream 100 bases:
>100_bases GTTTTAGTTACTCTATTCTCAAAATACTTCTCCGGTGGTGGTTATACTCTATGTATGACCACCATTTTTTTAGGTTGAAT CACTGAAATACCCCAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MDTFDFLMHGFAVASTPKNLLLALIGAFLGTIVGMLPGLGPINGVAILLPFAFALGLPPESALILLAAVYLGCEYGGRIS AILINVPGDAGAIMTTLDGYPLAKQGKAGIALSLSAVSSFVGATIATIGVVLFAPLLAKWAISFGPAEYFVLMVFAITCL SGLVGDQPVKTGIAALIGLGLATVGVDAVTGIYRFTFDSVNLSDGIQFTTIVIGFFSVSEILILLEKTTTGHKVIEQGKR SLLNFKEFTFAFGAMLRSGLMGFVVGILPGAGATIASAMTYASERKIAGDTGTFGDGDLRGVASPEAANNASACGSFVPM LTLGVPGSGTTAVMMGALTLYNITPGPQLFTEQPDIVWGLIASLFICNVILLIMNIPLVGLFAKLLDVPNYILIPAIAAV SFVGVYSIHSTTFDLVFMVALGVFGYFLRKLNFPLSALILGYVLGELMESNLRRALSISQGELSILWSSPITVVLWLLAI LMIFMPVIRSIYRRKFKPAI
Sequences:
>Translated_500_residues MDTFDFLMHGFAVASTPKNLLLALIGAFLGTIVGMLPGLGPINGVAILLPFAFALGLPPESALILLAAVYLGCEYGGRIS AILINVPGDAGAIMTTLDGYPLAKQGKAGIALSLSAVSSFVGATIATIGVVLFAPLLAKWAISFGPAEYFVLMVFAITCL SGLVGDQPVKTGIAALIGLGLATVGVDAVTGIYRFTFDSVNLSDGIQFTTIVIGFFSVSEILILLEKTTTGHKVIEQGKR SLLNFKEFTFAFGAMLRSGLMGFVVGILPGAGATIASAMTYASERKIAGDTGTFGDGDLRGVASPEAANNASACGSFVPM LTLGVPGSGTTAVMMGALTLYNITPGPQLFTEQPDIVWGLIASLFICNVILLIMNIPLVGLFAKLLDVPNYILIPAIAAV SFVGVYSIHSTTFDLVFMVALGVFGYFLRKLNFPLSALILGYVLGELMESNLRRALSISQGELSILWSSPITVVLWLLAI LMIFMPVIRSIYRRKFKPAI >Mature_500_residues MDTFDFLMHGFAVASTPKNLLLALIGAFLGTIVGMLPGLGPINGVAILLPFAFALGLPPESALILLAAVYLGCEYGGRIS AILINVPGDAGAIMTTLDGYPLAKQGKAGIALSLSAVSSFVGATIATIGVVLFAPLLAKWAISFGPAEYFVLMVFAITCL SGLVGDQPVKTGIAALIGLGLATVGVDAVTGIYRFTFDSVNLSDGIQFTTIVIGFFSVSEILILLEKTTTGHKVIEQGKR SLLNFKEFTFAFGAMLRSGLMGFVVGILPGAGATIASAMTYASERKIAGDTGTFGDGDLRGVASPEAANNASACGSFVPM LTLGVPGSGTTAVMMGALTLYNITPGPQLFTEQPDIVWGLIASLFICNVILLIMNIPLVGLFAKLLDVPNYILIPAIAAV SFVGVYSIHSTTFDLVFMVALGVFGYFLRKLNFPLSALILGYVLGELMESNLRRALSISQGELSILWSSPITVVLWLLAI LMIFMPVIRSIYRRKFKPAI
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52533; Mature: 52533
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTFDFLMHGFAVASTPKNLLLALIGAFLGTIVGMLPGLGPINGVAILLPFAFALGLPPE CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH SALILLAAVYLGCEYGGRISAILINVPGDAGAIMTTLDGYPLAKQGKAGIALSLSAVSSF HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHH VGATIATIGVVLFAPLLAKWAISFGPAEYFVLMVFAITCLSGLVGDQPVKTGIAALIGLG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LATVGVDAVTGIYRFTFDSVNLSDGIQFTTIVIGFFSVSEILILLEKTTTGHKVIEQGKR HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SLLNFKEFTFAFGAMLRSGLMGFVVGILPGAGATIASAMTYASERKIAGDTGTFGDGDLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GVASPEAANNASACGSFVPMLTLGVPGSGTTAVMMGALTLYNITPGPQLFTEQPDIVWGL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCHHHHHH IASLFICNVILLIMNIPLVGLFAKLLDVPNYILIPAIAAVSFVGVYSIHSTTFDLVFMVA HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVFGYFLRKLNFPLSALILGYVLGELMESNLRRALSISQGELSILWSSPITVVLWLLAI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH LMIFMPVIRSIYRRKFKPAI HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDTFDFLMHGFAVASTPKNLLLALIGAFLGTIVGMLPGLGPINGVAILLPFAFALGLPPE CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH SALILLAAVYLGCEYGGRISAILINVPGDAGAIMTTLDGYPLAKQGKAGIALSLSAVSSF HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHH VGATIATIGVVLFAPLLAKWAISFGPAEYFVLMVFAITCLSGLVGDQPVKTGIAALIGLG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LATVGVDAVTGIYRFTFDSVNLSDGIQFTTIVIGFFSVSEILILLEKTTTGHKVIEQGKR HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SLLNFKEFTFAFGAMLRSGLMGFVVGILPGAGATIASAMTYASERKIAGDTGTFGDGDLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GVASPEAANNASACGSFVPMLTLGVPGSGTTAVMMGALTLYNITPGPQLFTEQPDIVWGL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCHHHHHH IASLFICNVILLIMNIPLVGLFAKLLDVPNYILIPAIAAVSFVGVYSIHSTTFDLVFMVA HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVFGYFLRKLNFPLSALILGYVLGELMESNLRRALSISQGELSILWSSPITVVLWLLAI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH LMIFMPVIRSIYRRKFKPAI HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]