Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006598
Identifier: 93006598
GI number: 93006598
Start: 2195017
End: 2195883
Strand: Direct
Name: 93006598
Synonym: Pcryo_1774
Alternate gene names: NA
Gene position: 2195017-2195883 (Clockwise)
Preceding gene: 93006595
Following gene: 93006609
Centisome position: 71.74
GC content: 39.1
Gene sequence:
>867_bases ATGTTAACTTTTCATTCAAAATCATCATTGCCTATATTCAAAACGGCAATGGCTTCTACTTTATTAATCGCTGCTGTACA ACTGATGACAGGCTGTGACTTACAGCCTTCATCTACAAATAACGATGACACTACACAAACGAATAATATAGACAAAGACA TGACCAAGAATGATGAGATGCCTGTCAATCCAGCACCTACAGATTCTGGCGCTATGGATAAAATACAAACTAACAACGCA GCAGATATAGCTGATGAGCAAATCGTCAGCCCGTCAGGGTATCAAAATTTAAGCTTCGGTCAGGCTATTACCCCTGAGTT GCTAAGTAGCCTAGGAATAACCAAAGCCAAGAGCGATAACGAACAATGCTATTACGTCAGTAATCCAGCACTGAGTTATG TCGATAAAGAGTACGGTGAACGCGCTTCTGTTTTATATCAAATCATAGATGGTAAAGTTGCTCTGATCAGTATTCGGGAT CCAATCATCCCGTTTTATAAAGACATCAATATTGGCAATTCCGCTACAGACGTTATGAAAGCACATAATGACGAGCTCAC TTACGAGGTCGATAAATATGCGGTTGATGGTGATTACTATAGCCTGATTGCTAACATCAATTTCAAAATGATAAAAGAAA GCCCACTTGGAGAATCATTAAGAGACGAAAATATTGAGCTTAATAATAAAGAGGATAAGTTACCCCTACAAATTGAATAT CATATCAAGGGCGGTCAAAAGCTGAGTGATTCTACGATTAAGGCGACTGAGTGGACAGCAGACAATAAAAGCCTATTAAA AGGTGAGGTAGGAAGCATCGATATTGGTATACCAGAAGCGATTTATTTGGTGGAAGGCTGCTCTTAA
Upstream 100 bases:
>100_bases AAACTTTAGCATCAATAAAATCTAGCATAAAAAAGACAGTTTATACAAGGTTCATTAAGGTATATATTAATATCAATGAC TCGAATTCGGGAATTAAGCC
Downstream 100 bases:
>100_bases AAGTTGAACATAATAACCCAGCATCTAGCTGGGTTATTAGTGAAAGGCCATTTTTATAAGGTTGCTTTGTGACTCATGCT CAATCAATGAGTTATCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEMPVNPAPTDSGAMDKIQTNNA ADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDNEQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRD PIIPFYKDINIGNSATDVMKAHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS
Sequences:
>Translated_288_residues MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEMPVNPAPTDSGAMDKIQTNNA ADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDNEQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRD PIIPFYKDINIGNSATDVMKAHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS >Mature_288_residues MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEMPVNPAPTDSGAMDKIQTNNA ADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDNEQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRD PIIPFYKDINIGNSATDVMKAHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31598; Mature: 31598
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEM CEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVNPAPTDSGAMDKIQTNNAADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDN CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC EQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRDPIIPFYKDINIGNSATDVMK CEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCHHHHHH AHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY HCCCCEEEEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCEECCCCCCCCEEEEE HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS EECCCCEECCCEEEEEEECCCCHHHHCCCCCEEEECCCCEEEEEECCC >Mature Secondary Structure MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEM CEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVNPAPTDSGAMDKIQTNNAADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDN CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC EQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRDPIIPFYKDINIGNSATDVMK CEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCHHHHHH AHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY HCCCCEEEEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCEECCCCCCCCEEEEE HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS EECCCCEECCCEEEEEEECCCCHHHHCCCCCEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA