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The map label for this gene is secB

Identifier: 93006562

GI number: 93006562

Start: 2152476

End: 2152928

Strand: Direct

Name: secB

Synonym: Pcryo_1738

Alternate gene names: 93006562

Gene position: 2152476-2152928 (Clockwise)

Preceding gene: 93006561

Following gene: 93006569

Centisome position: 70.35

GC content: 44.37

Gene sequence:

>453_bases
ATGGCTGAAGAACAAGCTCAACCGCAATTAGCACTAGAACGTATTTATGTCAAAGACATGTCACTTGAAGTCCCAGGCGC
TGGCGTATTCACCAAAGAGTGGAACCCTGAGCTTGATATTAATCTCTCTAGCAATGCCGAAAAACTGGACGATGACCATT
ATCAGGTTGTATTAACCGTTAGTGTCACTGCGAAAAATGCTGAAGAAGCGGCGTTTATCGCGGAAGTTCATCAAGCAGGT
ATCTTCTTATTAAAAGACATCCCAGAAGATCAAATTGGTCAAATCCTAGGTGCTTATTGCCCGAACGTTTTGTTCCCATA
TGCTCGTGAAGTCATCAGCGATATCGTAACGCGTGGTAGCTTCCCGCAGTTATTGCTTGCGCCAGTTAACTTTGACCAAG
CTTTTGCGCAAAGTCAGCAGCAAGCACAAGTTGATGCTGAAGGTAACGCTTAA

Upstream 100 bases:

>100_bases
GATAAAAAATATCGAGCTTTTGTCTCGAATTATATTACAATGCTATTTTACTAAAATAACAGTTTGCCCAATCACTTGAT
TAACTTTTAGAGGAATTATC

Downstream 100 bases:

>100_bases
GTTTTAAATTAAACGCTACTGGCTGTATCAATAAGACGTTTTAATAAAAAAGCCGTTTACTTATTATGAGTAAGCGGCTT
TTTTATGGAAATTTTTAGAG

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MAEEQAQPQLALERIYVKDMSLEVPGAGVFTKEWNPELDINLSSNAEKLDDDHYQVVLTVSVTAKNAEEAAFIAEVHQAG
IFLLKDIPEDQIGQILGAYCPNVLFPYAREVISDIVTRGSFPQLLLAPVNFDQAFAQSQQQAQVDAEGNA

Sequences:

>Translated_150_residues
MAEEQAQPQLALERIYVKDMSLEVPGAGVFTKEWNPELDINLSSNAEKLDDDHYQVVLTVSVTAKNAEEAAFIAEVHQAG
IFLLKDIPEDQIGQILGAYCPNVLFPYAREVISDIVTRGSFPQLLLAPVNFDQAFAQSQQQAQVDAEGNA
>Mature_149_residues
AEEQAQPQLALERIYVKDMSLEVPGAGVFTKEWNPELDINLSSNAEKLDDDHYQVVLTVSVTAKNAEEAAFIAEVHQAGI
FLLKDIPEDQIGQILGAYCPNVLFPYAREVISDIVTRGSFPQLLLAPVNFDQAFAQSQQQAQVDAEGNA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=131, Percent_Identity=54.1984732824427, Blast_Score=150, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB_PSYCK (Q1Q9Y8)

Other databases:

- EMBL:   CP000323
- RefSeq:   YP_580999.1
- ProteinModelPortal:   Q1Q9Y8
- SMR:   Q1Q9Y8
- STRING:   Q1Q9Y8
- GeneID:   4035239
- GenomeReviews:   CP000323_GR
- KEGG:   pcr:Pcryo_1738
- NMPDR:   fig|335284.3.peg.2032
- eggNOG:   COG1952
- HOGENOM:   HBG294212
- OMA:   GFPPLMI
- PhylomeDB:   Q1Q9Y8
- ProtClustDB:   PRK05751
- BioCyc:   PCRY335284:PCRYO_1738-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- PRINTS:   PR01594
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 16491; Mature: 16359

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEQAQPQLALERIYVKDMSLEVPGAGVFTKEWNPELDINLSSNAEKLDDDHYQVVLTV
CCCCCCCHHHHHHHHHHHCCEEECCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEEE
SVTAKNAEEAAFIAEVHQAGIFLLKDIPEDQIGQILGAYCPNVLFPYAREVISDIVTRGS
EEECCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
FPQLLLAPVNFDQAFAQSQQQAQVDAEGNA
CCCEEEECCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEEQAQPQLALERIYVKDMSLEVPGAGVFTKEWNPELDINLSSNAEKLDDDHYQVVLTV
CCCCCCHHHHHHHHHHHCCEEECCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEEE
SVTAKNAEEAAFIAEVHQAGIFLLKDIPEDQIGQILGAYCPNVLFPYAREVISDIVTRGS
EEECCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
FPQLLLAPVNFDQAFAQSQQQAQVDAEGNA
CCCEEEECCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA