Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is purH [H]
Identifier: 93006475
GI number: 93006475
Start: 2033834
End: 2035414
Strand: Direct
Name: purH [H]
Synonym: Pcryo_1651
Alternate gene names: 93006475
Gene position: 2033834-2035414 (Clockwise)
Preceding gene: 93006474
Following gene: 93006478
Centisome position: 66.47
GC content: 47.25
Gene sequence:
>1581_bases ATGAGTAAAGCCCCACTAGCACTACTGTCGGTCTCCAATAAATCCAATATCGTTGAGTTCGCTCAAGGTCTGATTAAAGC AGGTTTTGGTCTGTTATCGACTGGCGGTACTTTCCGTTTGCTAACAGAGCATAATGTCGCTGTCACCGAAGTATCAGACT ATACGGGTTTCCCTGAGATGATGGATGGTCGGGTTAAAACGCTTCATCCCAAGATTCACGGTGGCATTTTGGGACGCCGC GGCACAGATGATGCGGTGATGAGTGAGCACGCGATTGAGCGTATTGATTTGGTAGTCGTAAACCTTTATCCATTTGCAGA AACGATTGCCCGTAGTGACGTTACCATGAATGATGCCATCGAAAATATCGATATTGGCGGACCTACGATGGTGCGTTCAG CGGCAAAGAATCATGCACACGTTGGTATTGTGACTGATCCAGCTGATTATACGCGTGTACTTGAAGCATTAGGAGATGGG ACGACATTAACCCATGCCTTACGCTACGATTTAGCGGTCAAAGCGTTTGAGCATACGGCACAATACGACGGGATGATTGC CAACTTCTTAGGCAGCCGTGTTAACGAGAATCAAGAGCCGGAAGATTTTTCACGTACCTTTAACGTTCAGCTAGAAAAAG TGCAAGACCTGCGCTACGGTGAAAACCCGCATCAAAAAGCAGCGTTCTATGTTGAAAACAACGCTTTAAAAAGCAAGCAA GCATCTATTGCTACTGCTAAGCAATTGCAAGGCAAAGCATTGTCTTATAACAATATCGCCGATACTGATGCCGCGCTTGA ATGTGTGAAAGCTTTTAGTACGCCTGCCTGTGTGATTGTCAAGCATGCCAACCCTTGCGGCGTTGCTGTCGACACTGATC AAGTAGCAGCATATCGCACTGCCTTTAGCACCGATCCTGAATCTTCTTTTGGCGGCATTATCGCTTTTAACCGCCCGTTA ACACTTGCCGCTGCTAAAGCCATTATCGACAATCAGTTTGTTGAAGTCATTATTGCCCCAAGCATTGAAGACGGTGTCCT TGAAGCGACAGCTAGCAAGAAAAACGTTCGCGTTTTGGTCTGCGGCGACTTGCCAGCACCTGAGTTACGTGACCGCCAGC TTGATTATAAGCGCGTCAATGGGGGCTTACTGGTGCAAGAGCAAGATTTAGGGTTAATTACTGCCAATGATTTAAAAATC GTCACAGACGTACAACCAACTGAAGCACAAATTGCTGATTTACTGTTTAGCTGGAACGTTGCAAAATACGTTAAATCTAA CGCCATCGTTTATGCTAAAGGTCAGCGTACCATTGGTGTCGGCGCAGGTCAGATGAGCCGTGTTAACTCAGCCCGTATCG CTGCTATTAAAGCGGAGCACGCCGGACTTGCAACCGAAGGCGCGGTTATGGCATCTGATGCTTTCTTCCCATTCCGTGAT GGTATCGATAATGCTGCCGAAGTAGGTATCGCAGCGATCATCCAACCAGGTGGCTCTATGCGTGATGATGAAACCATTGC TGCGGCAAATGAGCACGGTATCGCCATGGTATTCACGGGTATGCGTCATTTCCGTCATTAA
Upstream 100 bases:
>100_bases TTGTAGTTTATGATCTTATCACTCACGATATGTTCTATACTGATTGTCATTGTTACCTTGCCAGACGTTTACGTCAGGCT TTTTTTATGGAAATTTTTTT
Downstream 100 bases:
>100_bases TTCATTATCAATTATTATCAGTATTAAAAATGCTTACCCTTGAATAAAAAAAGCCACTGTATGATTACAGTGGCTTTTTT AATGGTTAAAAATAGCTTTA
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MSKAPLALLSVSNKSNIVEFAQGLIKAGFGLLSTGGTFRLLTEHNVAVTEVSDYTGFPEMMDGRVKTLHPKIHGGILGRR GTDDAVMSEHAIERIDLVVVNLYPFAETIARSDVTMNDAIENIDIGGPTMVRSAAKNHAHVGIVTDPADYTRVLEALGDG TTLTHALRYDLAVKAFEHTAQYDGMIANFLGSRVNENQEPEDFSRTFNVQLEKVQDLRYGENPHQKAAFYVENNALKSKQ ASIATAKQLQGKALSYNNIADTDAALECVKAFSTPACVIVKHANPCGVAVDTDQVAAYRTAFSTDPESSFGGIIAFNRPL TLAAAKAIIDNQFVEVIIAPSIEDGVLEATASKKNVRVLVCGDLPAPELRDRQLDYKRVNGGLLVQEQDLGLITANDLKI VTDVQPTEAQIADLLFSWNVAKYVKSNAIVYAKGQRTIGVGAGQMSRVNSARIAAIKAEHAGLATEGAVMASDAFFPFRD GIDNAAEVGIAAIIQPGGSMRDDETIAAANEHGIAMVFTGMRHFRH
Sequences:
>Translated_526_residues MSKAPLALLSVSNKSNIVEFAQGLIKAGFGLLSTGGTFRLLTEHNVAVTEVSDYTGFPEMMDGRVKTLHPKIHGGILGRR GTDDAVMSEHAIERIDLVVVNLYPFAETIARSDVTMNDAIENIDIGGPTMVRSAAKNHAHVGIVTDPADYTRVLEALGDG TTLTHALRYDLAVKAFEHTAQYDGMIANFLGSRVNENQEPEDFSRTFNVQLEKVQDLRYGENPHQKAAFYVENNALKSKQ ASIATAKQLQGKALSYNNIADTDAALECVKAFSTPACVIVKHANPCGVAVDTDQVAAYRTAFSTDPESSFGGIIAFNRPL TLAAAKAIIDNQFVEVIIAPSIEDGVLEATASKKNVRVLVCGDLPAPELRDRQLDYKRVNGGLLVQEQDLGLITANDLKI VTDVQPTEAQIADLLFSWNVAKYVKSNAIVYAKGQRTIGVGAGQMSRVNSARIAAIKAEHAGLATEGAVMASDAFFPFRD GIDNAAEVGIAAIIQPGGSMRDDETIAAANEHGIAMVFTGMRHFRH >Mature_525_residues SKAPLALLSVSNKSNIVEFAQGLIKAGFGLLSTGGTFRLLTEHNVAVTEVSDYTGFPEMMDGRVKTLHPKIHGGILGRRG TDDAVMSEHAIERIDLVVVNLYPFAETIARSDVTMNDAIENIDIGGPTMVRSAAKNHAHVGIVTDPADYTRVLEALGDGT TLTHALRYDLAVKAFEHTAQYDGMIANFLGSRVNENQEPEDFSRTFNVQLEKVQDLRYGENPHQKAAFYVENNALKSKQA SIATAKQLQGKALSYNNIADTDAALECVKAFSTPACVIVKHANPCGVAVDTDQVAAYRTAFSTDPESSFGGIIAFNRPLT LAAAKAIIDNQFVEVIIAPSIEDGVLEATASKKNVRVLVCGDLPAPELRDRQLDYKRVNGGLLVQEQDLGLITANDLKIV TDVQPTEAQIADLLFSWNVAKYVKSNAIVYAKGQRTIGVGAGQMSRVNSARIAAIKAEHAGLATEGAVMASDAFFPFRDG IDNAAEVGIAAIIQPGGSMRDDETIAAANEHGIAMVFTGMRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=542, Percent_Identity=35.0553505535055, Blast_Score=243, Evalue=3e-64, Organism=Escherichia coli, GI1790439, Length=526, Percent_Identity=65.0190114068441, Blast_Score=682, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985564, Length=508, Percent_Identity=33.8582677165354, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI71985574, Length=339, Percent_Identity=28.023598820059, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71985556, Length=60, Percent_Identity=51.6666666666667, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323768, Length=492, Percent_Identity=36.1788617886179, Blast_Score=260, Evalue=4e-70, Organism=Saccharomyces cerevisiae, GI6323056, Length=494, Percent_Identity=35.2226720647773, Blast_Score=257, Evalue=3e-69, Organism=Drosophila melanogaster, GI24649832, Length=514, Percent_Identity=34.8249027237354, Blast_Score=248, Evalue=1e-65,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56555; Mature: 56424
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAPLALLSVSNKSNIVEFAQGLIKAGFGLLSTGGTFRLLTEHNVAVTEVSDYTGFPEM CCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCEEEEEEECCEEEEEECCCCCCHHH MDGRVKTLHPKIHGGILGRRGTDDAVMSEHAIERIDLVVVNLYPFAETIARSDVTMNDAI HCCCEEEECCHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEEEEHHHHHHHHCCCCHHHHH ENIDIGGPTMVRSAAKNHAHVGIVTDPADYTRVLEALGDGTTLTHALRYDLAVKAFEHTA HCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH QYDGMIANFLGSRVNENQEPEDFSRTFNVQLEKVQDLRYGENPHQKAAFYVENNALKSKQ HHCCHHHHHHHHHCCCCCCCHHHHHEECEEHHHHHHHHCCCCCCCCEEEEEECCCCCCHH ASIATAKQLQGKALSYNNIADTDAALECVKAFSTPACVIVKHANPCGVAVDTDQVAAYRT HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHHHH AFSTDPESSFGGIIAFNRPLTLAAAKAIIDNQFVEVIIAPSIEDGVLEATASKKNVRVLV HCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCEEEEE CGDLPAPELRDRQLDYKRVNGGLLVQEQDLGLITANDLKIVTDVQPTEAQIADLLFSWNV ECCCCCCCHHCCCCCCEECCCCEEEEECCCCEEEECCEEEEECCCCCHHHHHHHHHHCCH AKYVKSNAIVYAKGQRTIGVGAGQMSRVNSARIAAIKAEHAGLATEGAVMASDAFFPFRD HHHHHCCEEEEECCCEEEEECCCCHHHCCCCEEEEEEECCCCCCCCCCEEECCCCCCHHC GIDNAAEVGIAAIIQPGGSMRDDETIAAANEHGIAMVFTGMRHFRH CCCHHHHCCEEEEECCCCCCCCCCEEEECCCCCEEEEEECHHHHCC >Mature Secondary Structure SKAPLALLSVSNKSNIVEFAQGLIKAGFGLLSTGGTFRLLTEHNVAVTEVSDYTGFPEM CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCEEEEEEECCEEEEEECCCCCCHHH MDGRVKTLHPKIHGGILGRRGTDDAVMSEHAIERIDLVVVNLYPFAETIARSDVTMNDAI HCCCEEEECCHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEEEEHHHHHHHHCCCCHHHHH ENIDIGGPTMVRSAAKNHAHVGIVTDPADYTRVLEALGDGTTLTHALRYDLAVKAFEHTA HCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH QYDGMIANFLGSRVNENQEPEDFSRTFNVQLEKVQDLRYGENPHQKAAFYVENNALKSKQ HHCCHHHHHHHHHCCCCCCCHHHHHEECEEHHHHHHHHCCCCCCCCEEEEEECCCCCCHH ASIATAKQLQGKALSYNNIADTDAALECVKAFSTPACVIVKHANPCGVAVDTDQVAAYRT HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHHHHHHHH AFSTDPESSFGGIIAFNRPLTLAAAKAIIDNQFVEVIIAPSIEDGVLEATASKKNVRVLV HCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCEEEEE CGDLPAPELRDRQLDYKRVNGGLLVQEQDLGLITANDLKIVTDVQPTEAQIADLLFSWNV ECCCCCCCHHCCCCCCEECCCCEEEEECCCCEEEECCEEEEECCCCCHHHHHHHHHHCCH AKYVKSNAIVYAKGQRTIGVGAGQMSRVNSARIAAIKAEHAGLATEGAVMASDAFFPFRD HHHHHCCEEEEECCCEEEEECCCCHHHCCCCEEEEEEECCCCCCCCCCEEECCCCCCHHC GIDNAAEVGIAAIIQPGGSMRDDETIAAANEHGIAMVFTGMRHFRH CCCHHHHCCEEEEECCCCCCCCCCEEEECCCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA