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The map label for this gene is 93006440

Identifier: 93006440

GI number: 93006440

Start: 1988824

End: 1990026

Strand: Direct

Name: 93006440

Synonym: Pcryo_1616

Alternate gene names: NA

Gene position: 1988824-1990026 (Clockwise)

Preceding gene: 93006439

Following gene: 93006441

Centisome position: 65.0

GC content: 38.15

Gene sequence:

>1203_bases
ATGATTACTTATATTCGCTTTAATAATTTTTACTCTTACTCAGAGTCTACTGAGGTGTCATTCTCTTTGGGTAAGCAACC
TACTAAGACTGACTATGATTTTTATGTTGATACCACGCAAGACCAGTATCGACTAAATAAAGTCACAGCTGTTCTTGGCG
CGAATGGCTCCGGTAAAACGCAGCTATTAAAAGCCATTGCTTTTCTTCGTTGGTTTATGTGTGAATCTACTAGCAGCCTT
GACTCAGAGCAACCTATTTCTTTTAGCCAATTTGCGCTAAGTAATGATGAATTTTCTGAATTTGAATTTGGTTTTTTACT
TAAAAATGCTGATGGCATTTATGATGAGTATCGCTATGAGCTAACGTTGACACAGCATAGCGTGGTTAAAGAGGCATTAT
ACAAAAAGACCAGTAGCCAATTTAGCTATGTATTTATACGTCATCATGACGGTGACAAGCTTAGCTATAAGCATCGTAAC
TTTGTCATTCCCTCTTTAGCTGATGATGTGAAAAAAAACGCCTCACTTATCAGCTATGCCAATTTGCTCGATGAGCCATT
GGCAGAAGCCATTTTTGATATGTTCAATCACTATAAAACTAATGTAGTCTCAATGGGTAGGCTTGGTAGCCTTAGCCAAT
CTATACCTGAAATGACAGAATTATTTGCTAGAGATGATGGTTTAAAACAAACCGCTGAAAAGCTACTTTGTCAGTTCGAT
ACGGGCATCGATGAGATTAATATAAAAAGCGTGATGATGGTAAACGAGGGTAAACAGCAAGAAGTACTGCTACCTTTTGG
TGTTCATAAAGTGGGTGATGAATCATTTGAGCTTATGATTTATGAAGAGTCTAATGGTACACAATCAGCCTATAGCTTGC
TTGGGCTCATATTGCCAGTGCTTAAGAATGGTGGTGTGGCCATTATTGATGAGCTTGATAATGACTTACACCCCCTACTG
TTACCTGCCATTTTTGATTTGTTTCGCTCATCGCATCATAATCCTCATAATGCTCAGCTTATTTTTAGTTGCCATACCCC
TGAGGTGTTCAACTTATTAAACAAGCATCAAATTTATTTGGTCGAAAAATACGAGCAAGCTTCAGAATCTTGGCGGCTTG
ATGAGATGGAAGGGATTCGTAATGATGATAACCTTTATGCAAAATATATGGCTGGCGCATTTGACGCGATACCAAATCTA
TAA

Upstream 100 bases:

>100_bases
TTATAACAAAGTGAACCTTAATACACTCAATAATACTACATGTACATTAATATGATATATTATCATGGAAACCACAATAT
TTTGTTAAAAGTGACTTAAT

Downstream 100 bases:

>100_bases
GGGGTTAGATTATGGCAAAGCGCAAACCTACTAGATCCGTCAACAAAACCACCCTACTCGTGATGGGTGAAGGTGAGCAT
GACAAGGCATTTTTAAGTCA

Product: abortive infection protein, internal deletion

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MITYIRFNNFYSYSESTEVSFSLGKQPTKTDYDFYVDTTQDQYRLNKVTAVLGANGSGKTQLLKAIAFLRWFMCESTSSL
DSEQPISFSQFALSNDEFSEFEFGFLLKNADGIYDEYRYELTLTQHSVVKEALYKKTSSQFSYVFIRHHDGDKLSYKHRN
FVIPSLADDVKKNASLISYANLLDEPLAEAIFDMFNHYKTNVVSMGRLGSLSQSIPEMTELFARDDGLKQTAEKLLCQFD
TGIDEINIKSVMMVNEGKQQEVLLPFGVHKVGDESFELMIYEESNGTQSAYSLLGLILPVLKNGGVAIIDELDNDLHPLL
LPAIFDLFRSSHHNPHNAQLIFSCHTPEVFNLLNKHQIYLVEKYEQASESWRLDEMEGIRNDDNLYAKYMAGAFDAIPNL

Sequences:

>Translated_400_residues
MITYIRFNNFYSYSESTEVSFSLGKQPTKTDYDFYVDTTQDQYRLNKVTAVLGANGSGKTQLLKAIAFLRWFMCESTSSL
DSEQPISFSQFALSNDEFSEFEFGFLLKNADGIYDEYRYELTLTQHSVVKEALYKKTSSQFSYVFIRHHDGDKLSYKHRN
FVIPSLADDVKKNASLISYANLLDEPLAEAIFDMFNHYKTNVVSMGRLGSLSQSIPEMTELFARDDGLKQTAEKLLCQFD
TGIDEINIKSVMMVNEGKQQEVLLPFGVHKVGDESFELMIYEESNGTQSAYSLLGLILPVLKNGGVAIIDELDNDLHPLL
LPAIFDLFRSSHHNPHNAQLIFSCHTPEVFNLLNKHQIYLVEKYEQASESWRLDEMEGIRNDDNLYAKYMAGAFDAIPNL
>Mature_400_residues
MITYIRFNNFYSYSESTEVSFSLGKQPTKTDYDFYVDTTQDQYRLNKVTAVLGANGSGKTQLLKAIAFLRWFMCESTSSL
DSEQPISFSQFALSNDEFSEFEFGFLLKNADGIYDEYRYELTLTQHSVVKEALYKKTSSQFSYVFIRHHDGDKLSYKHRN
FVIPSLADDVKKNASLISYANLLDEPLAEAIFDMFNHYKTNVVSMGRLGSLSQSIPEMTELFARDDGLKQTAEKLLCQFD
TGIDEINIKSVMMVNEGKQQEVLLPFGVHKVGDESFELMIYEESNGTQSAYSLLGLILPVLKNGGVAIIDELDNDLHPLL
LPAIFDLFRSSHHNPHNAQLIFSCHTPEVFNLLNKHQIYLVEKYEQASESWRLDEMEGIRNDDNLYAKYMAGAFDAIPNL

Specific function: Unknown

COG id: COG1106

COG function: function code R; Predicted ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45642; Mature: 45642

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYIRFNNFYSYSESTEVSFSLGKQPTKTDYDFYVDTTQDQYRLNKVTAVLGANGSGKT
CEEEEEECCEECCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHEEEEEECCCCCHH
QLLKAIAFLRWFMCESTSSLDSEQPISFSQFALSNDEFSEFEFGFLLKNADGIYDEYRYE
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEE
LTLTQHSVVKEALYKKTSSQFSYVFIRHHDGDKLSYKHRNFVIPSLADDVKKNASLISYA
EEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHH
NLLDEPLAEAIFDMFNHYKTNVVSMGRLGSLSQSIPEMTELFARDDGLKQTAEKLLCQFD
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
TGIDEINIKSVMMVNEGKQQEVLLPFGVHKVGDESFELMIYEESNGTQSAYSLLGLILPV
CCCCCCCEEEEEEECCCCCCEEEEECCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
LKNGGVAIIDELDNDLHPLLLPAIFDLFRSSHHNPHNAQLIFSCHTPEVFNLLNKHQIYL
HCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCEEEE
VEKYEQASESWRLDEMEGIRNDDNLYAKYMAGAFDAIPNL
EECHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MITYIRFNNFYSYSESTEVSFSLGKQPTKTDYDFYVDTTQDQYRLNKVTAVLGANGSGKT
CEEEEEECCEECCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHEEEEEECCCCCHH
QLLKAIAFLRWFMCESTSSLDSEQPISFSQFALSNDEFSEFEFGFLLKNADGIYDEYRYE
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEE
LTLTQHSVVKEALYKKTSSQFSYVFIRHHDGDKLSYKHRNFVIPSLADDVKKNASLISYA
EEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHH
NLLDEPLAEAIFDMFNHYKTNVVSMGRLGSLSQSIPEMTELFARDDGLKQTAEKLLCQFD
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
TGIDEINIKSVMMVNEGKQQEVLLPFGVHKVGDESFELMIYEESNGTQSAYSLLGLILPV
CCCCCCCEEEEEEECCCCCCEEEEECCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
LKNGGVAIIDELDNDLHPLLLPAIFDLFRSSHHNPHNAQLIFSCHTPEVFNLLNKHQIYL
HCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCEEEE
VEKYEQASESWRLDEMEGIRNDDNLYAKYMAGAFDAIPNL
EECHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA