Click here to switch to the map view.

The map label for this gene is 93006423

Identifier: 93006423

GI number: 93006423

Start: 1959414

End: 1960439

Strand: Direct

Name: 93006423

Synonym: Pcryo_1599

Alternate gene names: NA

Gene position: 1959414-1960439 (Clockwise)

Preceding gene: 93006422

Following gene: 93006424

Centisome position: 64.04

GC content: 45.03

Gene sequence:

>1026_bases
ATGTTGTATCAGAATCGTTTTGCCAAAGCTCTTTTATGGGGCGGTATATGTACCGCTATTTTGACTGGTTGTAATCAGCC
AGCTAAAGAAGGTACCGCGACTGATGGTACTGCGGGCACCGATACCACAACAGAAATGAAAACGGTTGCTATTACTGCTA
TCGTTGAGCATCCAGCACTTGATGCCGTACGTAAAGGCGTAATCGATGAGCTAAACGATGCCGGCTTTAAAGATGGTGAA
AACCTGAAAGTCAACTTCCAAAGTGCTCAAGGTAATACTGCTACTGCTGGTCAGATTGCCAAGCAATTCGTCGCCGACAA
TTCAGACGTTATCATTGCTATTGGTACGCCATCGGCTCAGTCAGTTGCTGCTGCCACCAGCAGTATTCCACTGGTATTTT
CAGCAGTTACTGATCCGGTTGAAGCCAAACTGGTCTCAAAACTTGATGGTTCTGGCACCAACGTCACCGGTGGTTCTGAT
GCGCTTCCTTATGAGCCACAAATCGACTTGATGCGCCAAATTATTCCTAGTCTCAAAAACGTCGGCTACGTCTATAGCCC
AGGTGAAGTCAACTCAACGATTATCCTAAAAAATCTAAAAGAAAAACTGACGCCACTTGGCATCAAAGTACATGAAGCCC
CTGCCCAGCGTAGTACTGATATTGCGATGGCAGCACGCAGCCTAGAAGGTAAGGTCGATATGATCTATACCTCAACGGAT
AATAACGTGGTTTCAGCTTATGAGTCACTATATCAAGCCGCTAAAGAAAGTAAGATTCCGTTAATTGCTTCGGATACCAG
CTCAGTTGAGCGCGGTGCTATCGCAGCATTGGGCGTCAACTATTATGATCTTGGTCGTGAAACTGGCAAAATCGTTGTAC
GTATCTTAAATGGTGAAAAAGCAGGCGCAATTCCCGTATACACGCCAAAAGTTCTTGACTTATATGTCAGCCCAAAACAT
GCTAAAGAGCAAGGCATCACCTTACCACAAGCGGTTATTGATAAAGCAAAAGAAGTGGTAGAGTAA

Upstream 100 bases:

>100_bases
TAATTTATAACAAACACTGTTTATAACCGCAGTACGTAAGACCTTCTATCTATCTTTTATATAATGTACGGACACATTAT
TATTTTCAGGAGTAAGACCC

Downstream 100 bases:

>100_bases
CTGCCTTTTACATAATCAGTATAAAACAAACAGTAGATGATAATGTTGATTGCGCAAGCTGCCATTATCGTCTACATTAG
CTTTACCTTGCTATTTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLYQNRFAKALLWGGICTAILTGCNQPAKEGTATDGTAGTDTTTEMKTVAITAIVEHPALDAVRKGVIDELNDAGFKDGE
NLKVNFQSAQGNTATAGQIAKQFVADNSDVIIAIGTPSAQSVAAATSSIPLVFSAVTDPVEAKLVSKLDGSGTNVTGGSD
ALPYEPQIDLMRQIIPSLKNVGYVYSPGEVNSTIILKNLKEKLTPLGIKVHEAPAQRSTDIAMAARSLEGKVDMIYTSTD
NNVVSAYESLYQAAKESKIPLIASDTSSVERGAIAALGVNYYDLGRETGKIVVRILNGEKAGAIPVYTPKVLDLYVSPKH
AKEQGITLPQAVIDKAKEVVE

Sequences:

>Translated_341_residues
MLYQNRFAKALLWGGICTAILTGCNQPAKEGTATDGTAGTDTTTEMKTVAITAIVEHPALDAVRKGVIDELNDAGFKDGE
NLKVNFQSAQGNTATAGQIAKQFVADNSDVIIAIGTPSAQSVAAATSSIPLVFSAVTDPVEAKLVSKLDGSGTNVTGGSD
ALPYEPQIDLMRQIIPSLKNVGYVYSPGEVNSTIILKNLKEKLTPLGIKVHEAPAQRSTDIAMAARSLEGKVDMIYTSTD
NNVVSAYESLYQAAKESKIPLIASDTSSVERGAIAALGVNYYDLGRETGKIVVRILNGEKAGAIPVYTPKVLDLYVSPKH
AKEQGITLPQAVIDKAKEVVE
>Mature_341_residues
MLYQNRFAKALLWGGICTAILTGCNQPAKEGTATDGTAGTDTTTEMKTVAITAIVEHPALDAVRKGVIDELNDAGFKDGE
NLKVNFQSAQGNTATAGQIAKQFVADNSDVIIAIGTPSAQSVAAATSSIPLVFSAVTDPVEAKLVSKLDGSGTNVTGGSD
ALPYEPQIDLMRQIIPSLKNVGYVYSPGEVNSTIILKNLKEKLTPLGIKVHEAPAQRSTDIAMAARSLEGKVDMIYTSTD
NNVVSAYESLYQAAKESKIPLIASDTSSVERGAIAALGVNYYDLGRETGKIVVRILNGEKAGAIPVYTPKVLDLYVSPKH
AKEQGITLPQAVIDKAKEVVE

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35951; Mature: 35951

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQNRFAKALLWGGICTAILTGCNQPAKEGTATDGTAGTDTTTEMKTVAITAIVEHPAL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEHHHCCHH
DAVRKGVIDELNDAGFKDGENLKVNFQSAQGNTATAGQIAKQFVADNSDVIIAIGTPSAQ
HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCH
SVAAATSSIPLVFSAVTDPVEAKLVSKLDGSGTNVTGGSDALPYEPQIDLMRQIIPSLKN
HHHHHHCCCCEEEEHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VGYVYSPGEVNSTIILKNLKEKLTPLGIKVHEAPAQRSTDIAMAARSLEGKVDMIYTSTD
CCEEECCCCCCCEEEHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCC
NNVVSAYESLYQAAKESKIPLIASDTSSVERGAIAALGVNYYDLGRETGKIVVRILNGEK
CCHHHHHHHHHHHHHHCCCCEEECCCCCHHCCCEEEECCCHHHCCCCCCEEEEEEECCCC
AGAIPVYTPKVLDLYVSPKHAKEQGITLPQAVIDKAKEVVE
CCCCCEECCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLYQNRFAKALLWGGICTAILTGCNQPAKEGTATDGTAGTDTTTEMKTVAITAIVEHPAL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEHHHCCHH
DAVRKGVIDELNDAGFKDGENLKVNFQSAQGNTATAGQIAKQFVADNSDVIIAIGTPSAQ
HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCH
SVAAATSSIPLVFSAVTDPVEAKLVSKLDGSGTNVTGGSDALPYEPQIDLMRQIIPSLKN
HHHHHHCCCCEEEEHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VGYVYSPGEVNSTIILKNLKEKLTPLGIKVHEAPAQRSTDIAMAARSLEGKVDMIYTSTD
CCEEECCCCCCCEEEHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCC
NNVVSAYESLYQAAKESKIPLIASDTSSVERGAIAALGVNYYDLGRETGKIVVRILNGEK
CCHHHHHHHHHHHHHHCCCCEEECCCCCHHCCCEEEECCCHHHCCCCCCEEEEEEECCCC
AGAIPVYTPKVLDLYVSPKHAKEQGITLPQAVIDKAKEVVE
CCCCCEECCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA