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The map label for this gene is 93006422

Identifier: 93006422

GI number: 93006422

Start: 1958225

End: 1959274

Strand: Direct

Name: 93006422

Synonym: Pcryo_1598

Alternate gene names: NA

Gene position: 1958225-1959274 (Clockwise)

Preceding gene: 93006420

Following gene: 93006423

Centisome position: 64.0

GC content: 45.43

Gene sequence:

>1050_bases
ATGATTTTTGCTACTACTTTACGCTTTAGCCTACTTGGTGCTGCGATGAGCGCCGCGCTTGGATTATCAGCCTGCTCTAA
ACCTGCAGATACTACAACGACCACCGATGACAGTACCACTACTGCTCAAAAACCTACCAAAACATTGGCAATCACTCAAA
TCGTTGAGCATCCCTCATTGGATGATATGCGTCGCGGCATTATTGATGAGTTGGCGGACAACGGTTATGTCGAAGGTCAA
AATCTAAAGGTTAACTTTCAAAGTGCGCAAGGCAATACCGCAACCGCAGGACAAATCGCCAAGCAGTTTGTCGGCGACAA
TCCTGATGCCATCGTCGCTATCTCAACCCCATCGGCACAATCTATCGTCTCTGCAACCACGACCATACCAATTATATATA
CCGCTGTCTCAGACCCACTGGGTGCCAAATTGATCACTGCAGATGGTAAACCCTTTCAAAGCAATTTAACCGGATTATCA
AGCCAATTACCATTAGAGCCACAGCTAGATTTGCTACAAAAAATCAAGCCTGACCTCAAAACCATTGGCTATGTATACAG
TCCTGGTGAAGCCAACTCGGTATCATTGCGTGATGCGCTTAAAAAAGCGCTGCCGGCACGTGGCTTATCATTACTAGATA
TTCCAGCCAACCGTCCAACCGATATCGGTATGGCGACACGTAGCTTACAGGGTCGCGCAGATATTATTTATACCTCGTTT
GACAATAATGTTGCCTCAGCCTTTGAAGCGATGGCACAAGCTGCCAATGAGCTAAAGCTGCCTATTGTTGCCTCTGATGA
ATTCAGTGTCCAACGCGGCGCCACAGCAGCACTTGGTGTCAATGATTATGATTTTGGTCGTACGACAGGTAAGATGGTTT
ATCGCATTTTAAATGGTGAAGCGGTCAGTACCGTTAAGCCTGAAGTCATGAACGAATTGACACTCTACGTCAGCCCTAAA
CATGCTAAAACGCAAGGTGTAGTACTGTCAGATGAGCTGTTGAAAAATGCTATTAATGTCGATGAAAAAGTAAAAACTGC
CAGCAAATAA

Upstream 100 bases:

>100_bases
GATCAATGGATTGATTACTTTGATGTTAGCCCGTTATCTCAGCATTCACATAACATTGACTCGGGTAACCTGCACTTTCT
AACCTACGAGCCACTATAAA

Downstream 100 bases:

>100_bases
TCGCTGGTAGATAAGAGTGAATACGCAGTAAATATCTTATAATTTATAACAAACACTGTTTATAACCGCAGTACGTAAGA
CCTTCTATCTATCTTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MIFATTLRFSLLGAAMSAALGLSACSKPADTTTTTDDSTTTAQKPTKTLAITQIVEHPSLDDMRRGIIDELADNGYVEGQ
NLKVNFQSAQGNTATAGQIAKQFVGDNPDAIVAISTPSAQSIVSATTTIPIIYTAVSDPLGAKLITADGKPFQSNLTGLS
SQLPLEPQLDLLQKIKPDLKTIGYVYSPGEANSVSLRDALKKALPARGLSLLDIPANRPTDIGMATRSLQGRADIIYTSF
DNNVASAFEAMAQAANELKLPIVASDEFSVQRGATAALGVNDYDFGRTTGKMVYRILNGEAVSTVKPEVMNELTLYVSPK
HAKTQGVVLSDELLKNAINVDEKVKTASK

Sequences:

>Translated_349_residues
MIFATTLRFSLLGAAMSAALGLSACSKPADTTTTTDDSTTTAQKPTKTLAITQIVEHPSLDDMRRGIIDELADNGYVEGQ
NLKVNFQSAQGNTATAGQIAKQFVGDNPDAIVAISTPSAQSIVSATTTIPIIYTAVSDPLGAKLITADGKPFQSNLTGLS
SQLPLEPQLDLLQKIKPDLKTIGYVYSPGEANSVSLRDALKKALPARGLSLLDIPANRPTDIGMATRSLQGRADIIYTSF
DNNVASAFEAMAQAANELKLPIVASDEFSVQRGATAALGVNDYDFGRTTGKMVYRILNGEAVSTVKPEVMNELTLYVSPK
HAKTQGVVLSDELLKNAINVDEKVKTASK
>Mature_349_residues
MIFATTLRFSLLGAAMSAALGLSACSKPADTTTTTDDSTTTAQKPTKTLAITQIVEHPSLDDMRRGIIDELADNGYVEGQ
NLKVNFQSAQGNTATAGQIAKQFVGDNPDAIVAISTPSAQSIVSATTTIPIIYTAVSDPLGAKLITADGKPFQSNLTGLS
SQLPLEPQLDLLQKIKPDLKTIGYVYSPGEANSVSLRDALKKALPARGLSLLDIPANRPTDIGMATRSLQGRADIIYTSF
DNNVASAFEAMAQAANELKLPIVASDEFSVQRGATAALGVNDYDFGRTTGKMVYRILNGEAVSTVKPEVMNELTLYVSPK
HAKTQGVVLSDELLKNAINVDEKVKTASK

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36949; Mature: 36949

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFATTLRFSLLGAAMSAALGLSACSKPADTTTTTDDSTTTAQKPTKTLAITQIVEHPSL
CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH
DDMRRGIIDELADNGYVEGQNLKVNFQSAQGNTATAGQIAKQFVGDNPDAIVAISTPSAQ
HHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHH
SIVSATTTIPIIYTAVSDPLGAKLITADGKPFQSNLTGLSSQLPLEPQLDLLQKIKPDLK
HHHHHHHEEEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCHH
TIGYVYSPGEANSVSLRDALKKALPARGLSLLDIPANRPTDIGMATRSLQGRADIIYTSF
HCCEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCCCEEEEEEEC
DNNVASAFEAMAQAANELKLPIVASDEFSVQRGATAALGVNDYDFGRTTGKMVYRILNGE
CCCHHHHHHHHHHHHHHCCCEEEECCCCCHHCCCEEEECCCCCCCCCHHHHHHHHHHCCC
AVSTVKPEVMNELTLYVSPKHAKTQGVVLSDELLKNAINVDEKVKTASK
CCCCCCHHHHCCEEEEECCCCCCCCCEEECHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MIFATTLRFSLLGAAMSAALGLSACSKPADTTTTTDDSTTTAQKPTKTLAITQIVEHPSL
CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH
DDMRRGIIDELADNGYVEGQNLKVNFQSAQGNTATAGQIAKQFVGDNPDAIVAISTPSAQ
HHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHH
SIVSATTTIPIIYTAVSDPLGAKLITADGKPFQSNLTGLSSQLPLEPQLDLLQKIKPDLK
HHHHHHHEEEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCHH
TIGYVYSPGEANSVSLRDALKKALPARGLSLLDIPANRPTDIGMATRSLQGRADIIYTSF
HCCEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCCCEEEEEEEC
DNNVASAFEAMAQAANELKLPIVASDEFSVQRGATAALGVNDYDFGRTTGKMVYRILNGE
CCCHHHHHHHHHHHHHHCCCEEEECCCCCHHCCCEEEECCCCCCCCCHHHHHHHHHHCCC
AVSTVKPEVMNELTLYVSPKHAKTQGVVLSDELLKNAINVDEKVKTASK
CCCCCCHHHHCCEEEEECCCCCCCCCEEECHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA