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The map label for this gene is petB [H]

Identifier: 93006408

GI number: 93006408

Start: 1943252

End: 1944457

Strand: Direct

Name: petB [H]

Synonym: Pcryo_1584

Alternate gene names: 93006408

Gene position: 1943252-1944457 (Clockwise)

Preceding gene: 93006407

Following gene: 93006409

Centisome position: 63.51

GC content: 44.36

Gene sequence:

>1206_bases
ATGCATTGGGTGGACGCGCGCTTTCCTGCGACTGAAACCTACGAATATCATATGTCAAAGTACTATGCACCAAAGAACTT
TAACTTTTGGTACTTCTTTGGCGTGTTATCAATGGTGGTACTGGTCAATCAGTTAGTAACTGGTATTTGGCTGACGATGA
TGTATAACCCAAGTGCCGAAGGGGCATTTGCGTCTGTTGAATATATCATGCGTGATGTTAAGGGTGGCTGGCTCATCCGT
TATATGCACTCGACTGGCGCATCTGCGTTCTTCGTAGTTGTTTACTTGCATATGTTCAGAGCCTTGCTATATGGTTCATA
CCAAAAACCGCGTGAGCTTATTTGGCTCATCGGTATGGGTATTTACTTAGCATTGATGGCAGAAGGTTTCTTCGGTTACC
TACTTCCTTGGGGCAACATGTCGTTCTGGGGTGCTCAGGTTATTCTAAACCTACCTGCGGCTCTGCCTGTGATTGGCGAT
GGTCTTGCTGAGTGGGTTCGTGGTGATTATATTATTTCAGGTATCACGCTAAACCGCTTCTTTGCTCTACACGTTGTGGC
GATTCCGCTTGTACTTGTGGGCTTAGTCTTTATGCATTTAGTGGCTCTGCATCATGTGGGTTCTAATAACCCTGATGGTA
TTGACATTAAGAAGCTAAAAGACAAAAACGGCGTGCCATTAGATGGTATCGAATTCCATCCGTACTACACCGTACACGAT
ATGGTGGGTATTGTTGTCTTCTTTATCTTATTCTTTGCTGTGGTATTCTTCTTCCCAGAAGGCGGCGGCTTCTTCCTTGA
GCCACCAAACTTTGAGACTGCCAACTCACTAAAAACACCAGCGCATATTGCACCGGTATGGTATTACACGCCTTTCTATG
CCATCTTACGTGCCGTTCCTGATAAGCTTGGTGGTGTGATTGCGATGGGTGCTGCTATTGCCGTATTGTTCTTAATACCT
TGGCTTGATAGATCGCCAGTACGCTCGATACGTTATAAAGGCATTTTATCTAAAATCGCTTTAACCGTGTTTGCTATTAG
TTTCTTAGTATTGGGTTATTTAGGTGCGACGCCTACCACTCCAACAGCAACCATAATGGCTCGTATCTTTACCATATTGT
ATTTCTTGTTCTTCTTATTGATGCCGTTTTACACTGCCATTGAGAAGTGTAAACAGCCACCAGAACGCGTTACCGGAGGT
CACTAA

Upstream 100 bases:

>100_bases
GGCGTACCTGCACCGCTTAACTTACCTATCCCAGAGTACAACATGGATGGTACCATCTTGACGATTGGGGAGGCTTAATA
TGAGCATGGGTAAAAAGTTA

Downstream 100 bases:

>100_bases
TGAGCACGCTAATTAAATCCCTAGCAGGTTTGGGCTTAGGCGCGGCATTAACTTTGACTGCTGGTAGCGCTCTAGCAGCA
GGTAGTGGCTGCGGTACGTT

Product: cytochrome b/b6-like

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MHWVDARFPATETYEYHMSKYYAPKNFNFWYFFGVLSMVVLVNQLVTGIWLTMMYNPSAEGAFASVEYIMRDVKGGWLIR
YMHSTGASAFFVVVYLHMFRALLYGSYQKPRELIWLIGMGIYLALMAEGFFGYLLPWGNMSFWGAQVILNLPAALPVIGD
GLAEWVRGDYIISGITLNRFFALHVVAIPLVLVGLVFMHLVALHHVGSNNPDGIDIKKLKDKNGVPLDGIEFHPYYTVHD
MVGIVVFFILFFAVVFFFPEGGGFFLEPPNFETANSLKTPAHIAPVWYYTPFYAILRAVPDKLGGVIAMGAAIAVLFLIP
WLDRSPVRSIRYKGILSKIALTVFAISFLVLGYLGATPTTPTATIMARIFTILYFLFFLLMPFYTAIEKCKQPPERVTGG
H

Sequences:

>Translated_401_residues
MHWVDARFPATETYEYHMSKYYAPKNFNFWYFFGVLSMVVLVNQLVTGIWLTMMYNPSAEGAFASVEYIMRDVKGGWLIR
YMHSTGASAFFVVVYLHMFRALLYGSYQKPRELIWLIGMGIYLALMAEGFFGYLLPWGNMSFWGAQVILNLPAALPVIGD
GLAEWVRGDYIISGITLNRFFALHVVAIPLVLVGLVFMHLVALHHVGSNNPDGIDIKKLKDKNGVPLDGIEFHPYYTVHD
MVGIVVFFILFFAVVFFFPEGGGFFLEPPNFETANSLKTPAHIAPVWYYTPFYAILRAVPDKLGGVIAMGAAIAVLFLIP
WLDRSPVRSIRYKGILSKIALTVFAISFLVLGYLGATPTTPTATIMARIFTILYFLFFLLMPFYTAIEKCKQPPERVTGG
H
>Mature_401_residues
MHWVDARFPATETYEYHMSKYYAPKNFNFWYFFGVLSMVVLVNQLVTGIWLTMMYNPSAEGAFASVEYIMRDVKGGWLIR
YMHSTGASAFFVVVYLHMFRALLYGSYQKPRELIWLIGMGIYLALMAEGFFGYLLPWGNMSFWGAQVILNLPAALPVIGD
GLAEWVRGDYIISGITLNRFFALHVVAIPLVLVGLVFMHLVALHHVGSNNPDGIDIKKLKDKNGVPLDGIEFHPYYTVHD
MVGIVVFFILFFAVVFFFPEGGGFFLEPPNFETANSLKTPAHIAPVWYYTPFYAILRAVPDKLGGVIAMGAAIAVLFLIP
WLDRSPVRSIRYKGILSKIALTVFAISFLVLGYLGATPTTPTATIMARIFTILYFLFFLLMPFYTAIEKCKQPPERVTGG
H

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=368, Percent_Identity=41.8478260869565, Blast_Score=259, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6226529, Length=367, Percent_Identity=42.7792915531335, Blast_Score=264, Evalue=2e-71,
Organism=Saccharomyces cerevisiae, GI6226532, Length=241, Percent_Identity=41.49377593361, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6226531, Length=146, Percent_Identity=45.2054794520548, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6226530, Length=126, Percent_Identity=45.2380952380952, Blast_Score=107, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 45238; Mature: 45238

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWVDARFPATETYEYHMSKYYAPKNFNFWYFFGVLSMVVLVNQLVTGIWLTMMYNPSAE
CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
GAFASVEYIMRDVKGGWLIRYMHSTGASAFFVVVYLHMFRALLYGSYQKPRELIWLIGMG
CHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IYLALMAEGFFGYLLPWGNMSFWGAQVILNLPAALPVIGDGLAEWVRGDYIISGITLNRF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECHHHHHH
FALHVVAIPLVLVGLVFMHLVALHHVGSNNPDGIDIKKLKDKNGVPLDGIEFHPYYTVHD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCCCCCCCEEECCCCHHHH
MVGIVVFFILFFAVVFFFPEGGGFFLEPPNFETANSLKTPAHIAPVWYYTPFYAILRAVP
HHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHH
DKLGGVIAMGAAIAVLFLIPWLDRSPVRSIRYKGILSKIALTVFAISFLVLGYLGATPTT
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PTATIMARIFTILYFLFFLLMPFYTAIEKCKQPPERVTGGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHWVDARFPATETYEYHMSKYYAPKNFNFWYFFGVLSMVVLVNQLVTGIWLTMMYNPSAE
CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
GAFASVEYIMRDVKGGWLIRYMHSTGASAFFVVVYLHMFRALLYGSYQKPRELIWLIGMG
CHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IYLALMAEGFFGYLLPWGNMSFWGAQVILNLPAALPVIGDGLAEWVRGDYIISGITLNRF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECHHHHHH
FALHVVAIPLVLVGLVFMHLVALHHVGSNNPDGIDIKKLKDKNGVPLDGIEFHPYYTVHD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCCCCCCCEEECCCCHHHH
MVGIVVFFILFFAVVFFFPEGGGFFLEPPNFETANSLKTPAHIAPVWYYTPFYAILRAVP
HHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHH
DKLGGVIAMGAAIAVLFLIPWLDRSPVRSIRYKGILSKIALTVFAISFLVLGYLGATPTT
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PTATIMARIFTILYFLFFLLMPFYTAIEKCKQPPERVTGGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA