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The map label for this gene is petC [H]

Identifier: 93006409

GI number: 93006409

Start: 1944457

End: 1945170

Strand: Direct

Name: petC [H]

Synonym: Pcryo_1585

Alternate gene names: 93006409

Gene position: 1944457-1945170 (Clockwise)

Preceding gene: 93006408

Following gene: 93006410

Centisome position: 63.55

GC content: 45.1

Gene sequence:

>714_bases
ATGAGCACGCTAATTAAATCCCTAGCAGGTTTGGGCTTAGGCGCGGCATTAACTTTGACTGCTGGTAGCGCTCTAGCAGC
AGGTAGTGGCTGCGGTACGTTTACCAATGCTGAGGGCATTGTAGAGCATTTGGCTTGTAGTACAGCGCCTATTGATTTTA
CCAATAAGGGCTCACTACAAAACGGTGCTAAGACGTTTATGAACTACTGTGCTGGGTGTCACTCAGCCAAGTACGTTCGT
CACTCACGCATCGCTAAAGACTTAGAGATACCACCTGAGTTGGTCGAAAAGTATTTGATGGTGACGACCGATCAGATCGG
TGATCATATCGATGCTGAGATTGACCCTGAAGTACAAGCCTCATGGTTTGGCGCGGCTCCTCCAGATTTGTCACTTGAGA
CAAGACTGCGCGGCGATGATTGGGTTTACACTTACCTATTGTCTTTTTACGAAGATCCAAGCCGTCCTTGGGGTGCTAAT
AACTTAGTCCTCGCAAATGCGGCAATGCCTCACGTTTTGCATAACATGCAAGAAGAGCTGAGTCAGGAAGAGTTCGAATC
TGAAGTAGGTGACTTGGTTAACTTTATGGCATGGATGGCAGAACCTGTTCGTCATGACCGTAAAGTGATTGGTTTCTTTG
TGATTTTATTCTTACTTGTGTTACTGATTCCAGTTTACTTGCTCAATAAAGAATTCTGGAAAGATATCAAATAA

Upstream 100 bases:

>100_bases
TCTTTACCATATTGTATTTCTTGTTCTTCTTATTGATGCCGTTTTACACTGCCATTGAGAAGTGTAAACAGCCACCAGAA
CGCGTTACCGGAGGTCACTA

Downstream 100 bases:

>100_bases
GCGATATTGATAATCGAGCAAGATATTGGTATAAAAAAAGCATTACTTCGGTAGTGCTTTTTTATGCTTTAAACATTTAT
AAATCAGCCGCAAAAGCAAA

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSTLIKSLAGLGLGAALTLTAGSALAAGSGCGTFTNAEGIVEHLACSTAPIDFTNKGSLQNGAKTFMNYCAGCHSAKYVR
HSRIAKDLEIPPELVEKYLMVTTDQIGDHIDAEIDPEVQASWFGAAPPDLSLETRLRGDDWVYTYLLSFYEDPSRPWGAN
NLVLANAAMPHVLHNMQEELSQEEFESEVGDLVNFMAWMAEPVRHDRKVIGFFVILFLLVLLIPVYLLNKEFWKDIK

Sequences:

>Translated_237_residues
MSTLIKSLAGLGLGAALTLTAGSALAAGSGCGTFTNAEGIVEHLACSTAPIDFTNKGSLQNGAKTFMNYCAGCHSAKYVR
HSRIAKDLEIPPELVEKYLMVTTDQIGDHIDAEIDPEVQASWFGAAPPDLSLETRLRGDDWVYTYLLSFYEDPSRPWGAN
NLVLANAAMPHVLHNMQEELSQEEFESEVGDLVNFMAWMAEPVRHDRKVIGFFVILFLLVLLIPVYLLNKEFWKDIK
>Mature_236_residues
STLIKSLAGLGLGAALTLTAGSALAAGSGCGTFTNAEGIVEHLACSTAPIDFTNKGSLQNGAKTFMNYCAGCHSAKYVRH
SRIAKDLEIPPELVEKYLMVTTDQIGDHIDAEIDPEVQASWFGAAPPDLSLETRLRGDDWVYTYLLSFYEDPSRPWGANN
LVLANAAMPHVLHNMQEELSQEEFESEVGDLVNFMAWMAEPVRHDRKVIGFFVILFLLVLLIPVYLLNKEFWKDIK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 26152; Mature: 26021

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLIKSLAGLGLGAALTLTAGSALAAGSGCGTFTNAEGIVEHLACSTAPIDFTNKGSLQ
CHHHHHHHHHCCCCHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
NGAKTFMNYCAGCHSAKYVRHSRIAKDLEIPPELVEKYLMVTTDQIGDHIDAEIDPEVQA
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
SWFGAAPPDLSLETRLRGDDWVYTYLLSFYEDPSRPWGANNLVLANAAMPHVLHNMQEEL
HCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
SQEEFESEVGDLVNFMAWMAEPVRHDRKVIGFFVILFLLVLLIPVYLLNKEFWKDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STLIKSLAGLGLGAALTLTAGSALAAGSGCGTFTNAEGIVEHLACSTAPIDFTNKGSLQ
HHHHHHHHHCCCCHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
NGAKTFMNYCAGCHSAKYVRHSRIAKDLEIPPELVEKYLMVTTDQIGDHIDAEIDPEVQA
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
SWFGAAPPDLSLETRLRGDDWVYTYLLSFYEDPSRPWGANNLVLANAAMPHVLHNMQEEL
HCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
SQEEFESEVGDLVNFMAWMAEPVRHDRKVIGFFVILFLLVLLIPVYLLNKEFWKDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA