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The map label for this gene is petA [H]

Identifier: 93006407

GI number: 93006407

Start: 1942645

End: 1943229

Strand: Direct

Name: petA [H]

Synonym: Pcryo_1583

Alternate gene names: 93006407

Gene position: 1942645-1943229 (Clockwise)

Preceding gene: 93006406

Following gene: 93006408

Centisome position: 63.49

GC content: 49.23

Gene sequence:

>585_bases
ATGAGCCATGCCGAAGGCGTTAACGTACAACGCCGTAGAGTTCTGATTGCCTCGACTGCCGTAATTGGTGCAGCTGGGGT
AGCTGCTGTGGCAACACCTTTTGTCCGCTCTTGGACCCCAAGTGCTAAAGCTGAAGCTGCCGGTGCGGCAGTGACCCAAG
ATATTGGTTCTATCGAAGCAGGACAAATGATTGTTGTCAAATATCGTGGCAAACCCATCTTTGTGGTTAAGCGTACTGAA
GAGATGCTCACCCTGCTTGAGTCAGTAAAGCCATTATTGTCTGACCCTGATTCTAGTGCCTCTTTGCAACCTGAGTACTG
TAAAAATCCTGAACGCTCTATCTCGCCAGAAGTATTGGTGGTAGAAGGCGTCTGTACACATTTAGGCTGTGCACCAAACT
ACCGTCCTGATGTTGGCGCAGCCGATTTAGGTGGTAATGACTGGTATGGCGGGTTTTTCTGCCCATGTCATGGCTCTAAA
TACGATTTAGCGGGTCGCGTTTATAGTGGCGTACCTGCACCGCTTAACTTACCTATCCCAGAGTACAACATGGATGGTAC
CATCTTGACGATTGGGGAGGCTTAA

Upstream 100 bases:

>100_bases
CAAAATTAGGCACAGCTAACGTGGCTTGATAATTGTTTCTATTCTAAGTCACAAACCCAGTGTGGGATAATCCCATTTCA
TTCACCTGGAGGAAGTATTA

Downstream 100 bases:

>100_bases
TATGAGCATGGGTAAAAAGTTAATGCATTGGGTGGACGCGCGCTTTCCTGCGACTGAAACCTACGAATATCATATGTCAA
AGTACTATGCACCAAAGAAC

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSHAEGVNVQRRRVLIASTAVIGAAGVAAVATPFVRSWTPSAKAEAAGAAVTQDIGSIEAGQMIVVKYRGKPIFVVKRTE
EMLTLLESVKPLLSDPDSSASLQPEYCKNPERSISPEVLVVEGVCTHLGCAPNYRPDVGAADLGGNDWYGGFFCPCHGSK
YDLAGRVYSGVPAPLNLPIPEYNMDGTILTIGEA

Sequences:

>Translated_194_residues
MSHAEGVNVQRRRVLIASTAVIGAAGVAAVATPFVRSWTPSAKAEAAGAAVTQDIGSIEAGQMIVVKYRGKPIFVVKRTE
EMLTLLESVKPLLSDPDSSASLQPEYCKNPERSISPEVLVVEGVCTHLGCAPNYRPDVGAADLGGNDWYGGFFCPCHGSK
YDLAGRVYSGVPAPLNLPIPEYNMDGTILTIGEA
>Mature_193_residues
SHAEGVNVQRRRVLIASTAVIGAAGVAAVATPFVRSWTPSAKAEAAGAAVTQDIGSIEAGQMIVVKYRGKPIFVVKRTEE
MLTLLESVKPLLSDPDSSASLQPEYCKNPERSISPEVLVVEGVCTHLGCAPNYRPDVGAADLGGNDWYGGFFCPCHGSKY
DLAGRVYSGVPAPLNLPIPEYNMDGTILTIGEA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=179, Percent_Identity=35.7541899441341, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17540418, Length=159, Percent_Identity=37.7358490566038, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6320811, Length=179, Percent_Identity=35.7541899441341, Blast_Score=114, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24580896, Length=161, Percent_Identity=38.5093167701863, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 20476; Mature: 20344

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHAEGVNVQRRRVLIASTAVIGAAGVAAVATPFVRSWTPSAKAEAAGAAVTQDIGSIEA
CCCCCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHCCCCCC
GQMIVVKYRGKPIFVVKRTEEMLTLLESVKPLLSDPDSSASLQPEYCKNPERSISPEVLV
CCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEE
VEGVCTHLGCAPNYRPDVGAADLGGNDWYGGFFCPCHGSKYDLAGRVYSGVPAPLNLPIP
EECHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCC
EYNMDGTILTIGEA
CCCCCCCEEEECCC
>Mature Secondary Structure 
SHAEGVNVQRRRVLIASTAVIGAAGVAAVATPFVRSWTPSAKAEAAGAAVTQDIGSIEA
CCCCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHCCCCCC
GQMIVVKYRGKPIFVVKRTEEMLTLLESVKPLLSDPDSSASLQPEYCKNPERSISPEVLV
CCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEE
VEGVCTHLGCAPNYRPDVGAADLGGNDWYGGFFCPCHGSKYDLAGRVYSGVPAPLNLPIP
EECHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCC
EYNMDGTILTIGEA
CCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA