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The map label for this gene is ruvB [H]

Identifier: 93005515

GI number: 93005515

Start: 811683

End: 812759

Strand: Direct

Name: ruvB [H]

Synonym: Pcryo_0685

Alternate gene names: 93005515

Gene position: 811683-812759 (Clockwise)

Preceding gene: 93005514

Following gene: 93005520

Centisome position: 26.53

GC content: 48.1

Gene sequence:

>1077_bases
ATGATGTTTTGCATGACTTATGCGCAGCGTTTGGTTATGCTATTTGTTACCCAATCTTTTAAAAACAATGCTTTAAATAT
AATGGCAAAAACTATGATGCAAGATCGTTTGATTAATCCGCTAGAAGGGGCAGCTGATGCTCCTGATGCCAATATTCGAC
CAGCATTATTGGCGGAATATATCGGTCAACCGGTGGTACGCGAGCAGATGGAAGTCTTTATTCAAGCAGCACGGGCGCGT
GATGAGGCATTGGATCATACGCTCATCTTTGGACCACCAGGCTTAGGGAAAACGACCCTTGCCAATATTATTGCTCGTGA
GATGGGTGGTAATTTACGTTCAACATCAGGACCTGTGCTTGAGCGCGCTGGTGATTTGGCAGCGATGCTGACCAATTTGG
AAGCTGGTGATGTCCTATTTATTGATGAGATTCACCGCTTAAGTCCGGTAATTGAAGAAATTCTCTATCCAGCGATGGAG
GATTTTCAACTGGATATCATGATTGGTGAAGGACCAGCAGCACGCTCTATTAAGCTTGATTTGCCGCCATTCACTCTGGT
CGCAGCAACCACCCGAGCCGGATTATTAACGTCACCATTGAGAGATCGCTTTGGTATCGTGCAGCGACTAGAGTTTTATA
ATATTGCTGATTTAACCACCATTGTCAGTCGCGCAGCGCGGTTGATGCGCGTGCCAATGAGTGAGGATGGTGCCGTTGAA
ATTGCGCGCCGTGCACGTGGTACGCCAAGGATTGCCAACCGTCTATTACGCCGTGTACGTGATTATGCTCAGGTCAGAGG
CGATGGCAGTATCAATGGGGCGATTGCTGGTAGTGCGCTCGATATGCTCGCAGTCGATAGACGTGGTCTCGATCATTTGG
ATAGACGCTATATTGAGATATTGCACGAGCGTTTTGACGGTGGACCTGCGGGCGTTGAAGCGGTGGCAGCAGCAATGGCT
GAAGACCGCGGTACGTTAGAGGATGTGATTGAGCCATACCTTATCCAACAAGGCTATGTACTTCGGACTGCACGTGGTCG
AGTATTAACGCAGATGGCGATCGATCAGATGCTATAA

Upstream 100 bases:

>100_bases
AACAGTTTCAAAGTTTTAAGTAGCGACATTTTTATAATAAAAAAGCGATTAAAAATAAGCGACATTAAATGTCGCTTATT
TTCGTTTTAGCCAGTGCTTT

Downstream 100 bases:

>100_bases
AGTTAGTCTAAAAAAATGTGCCTACACTTAATTAGAATATTAAATGTAGGCACATTTTTTTTGTTTTATTTTTTATAGTA
TCTATTAAATAGTGGATGAA

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MMFCMTYAQRLVMLFVTQSFKNNALNIMAKTMMQDRLINPLEGAADAPDANIRPALLAEYIGQPVVREQMEVFIQAARAR
DEALDHTLIFGPPGLGKTTLANIIAREMGGNLRSTSGPVLERAGDLAAMLTNLEAGDVLFIDEIHRLSPVIEEILYPAME
DFQLDIMIGEGPAARSIKLDLPPFTLVAATTRAGLLTSPLRDRFGIVQRLEFYNIADLTTIVSRAARLMRVPMSEDGAVE
IARRARGTPRIANRLLRRVRDYAQVRGDGSINGAIAGSALDMLAVDRRGLDHLDRRYIEILHERFDGGPAGVEAVAAAMA
EDRGTLEDVIEPYLIQQGYVLRTARGRVLTQMAIDQML

Sequences:

>Translated_358_residues
MMFCMTYAQRLVMLFVTQSFKNNALNIMAKTMMQDRLINPLEGAADAPDANIRPALLAEYIGQPVVREQMEVFIQAARAR
DEALDHTLIFGPPGLGKTTLANIIAREMGGNLRSTSGPVLERAGDLAAMLTNLEAGDVLFIDEIHRLSPVIEEILYPAME
DFQLDIMIGEGPAARSIKLDLPPFTLVAATTRAGLLTSPLRDRFGIVQRLEFYNIADLTTIVSRAARLMRVPMSEDGAVE
IARRARGTPRIANRLLRRVRDYAQVRGDGSINGAIAGSALDMLAVDRRGLDHLDRRYIEILHERFDGGPAGVEAVAAAMA
EDRGTLEDVIEPYLIQQGYVLRTARGRVLTQMAIDQML
>Mature_358_residues
MMFCMTYAQRLVMLFVTQSFKNNALNIMAKTMMQDRLINPLEGAADAPDANIRPALLAEYIGQPVVREQMEVFIQAARAR
DEALDHTLIFGPPGLGKTTLANIIAREMGGNLRSTSGPVLERAGDLAAMLTNLEAGDVLFIDEIHRLSPVIEEILYPAME
DFQLDIMIGEGPAARSIKLDLPPFTLVAATTRAGLLTSPLRDRFGIVQRLEFYNIADLTTIVSRAARLMRVPMSEDGAVE
IARRARGTPRIANRLLRRVRDYAQVRGDGSINGAIAGSALDMLAVDRRGLDHLDRRYIEILHERFDGGPAGVEAVAAAMA
EDRGTLEDVIEPYLIQQGYVLRTARGRVLTQMAIDQML

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=312, Percent_Identity=70.5128205128205, Blast_Score=450, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 39472; Mature: 39472

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFCMTYAQRLVMLFVTQSFKNNALNIMAKTMMQDRLINPLEGAADAPDANIRPALLAEY
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
IGQPVVREQMEVFIQAARARDEALDHTLIFGPPGLGKTTLANIIAREMGGNLRSTSGPVL
HCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
ERAGDLAAMLTNLEAGDVLFIDEIHRLSPVIEEILYPAMEDFQLDIMIGEGPAARSIKLD
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEC
LPPFTLVAATTRAGLLTSPLRDRFGIVQRLEFYNIADLTTIVSRAARLMRVPMSEDGAVE
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IARRARGTPRIANRLLRRVRDYAQVRGDGSINGAIAGSALDMLAVDRRGLDHLDRRYIEI
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
LHERFDGGPAGVEAVAAAMAEDRGTLEDVIEPYLIQQGYVLRTARGRVLTQMAIDQML
HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MMFCMTYAQRLVMLFVTQSFKNNALNIMAKTMMQDRLINPLEGAADAPDANIRPALLAEY
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
IGQPVVREQMEVFIQAARARDEALDHTLIFGPPGLGKTTLANIIAREMGGNLRSTSGPVL
HCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
ERAGDLAAMLTNLEAGDVLFIDEIHRLSPVIEEILYPAMEDFQLDIMIGEGPAARSIKLD
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEC
LPPFTLVAATTRAGLLTSPLRDRFGIVQRLEFYNIADLTTIVSRAARLMRVPMSEDGAVE
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IARRARGTPRIANRLLRRVRDYAQVRGDGSINGAIAGSALDMLAVDRRGLDHLDRRYIEI
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
LHERFDGGPAGVEAVAAAMAEDRGTLEDVIEPYLIQQGYVLRTARGRVLTQMAIDQML
HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA