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The map label for this gene is ruvA [H]

Identifier: 93005514

GI number: 93005514

Start: 810982

End: 811605

Strand: Direct

Name: ruvA [H]

Synonym: Pcryo_0684

Alternate gene names: 93005514

Gene position: 810982-811605 (Clockwise)

Preceding gene: 93005513

Following gene: 93005515

Centisome position: 26.5

GC content: 45.35

Gene sequence:

>624_bases
ATGATTGGATTGATTAATGGACAGGTGCAATATTTGATGGCACCGACTGCCTGTGTCATGACCACCTCTGGCGTCGGCTA
TGATATTGAGTTGCCATTGCCGTCATTCTGCCAGTTGCGCCTCAATGAGCAGGCGAGTATTTGGACGCATTTCCATGTGC
GCGAAGATGCGCAGCTGCTTTATGGTTTTATTGACCGTAAAGAGCGTGATGTCTTTCGCCAGCTGATTAAAATCAATGGC
GTCGGCGCAAAAATGGCTTTAGCAATGCTATCTGCGATGTCAGCCGCTGAGCTAAAAATGCATGTCGAGCAAGATTCAGA
AGATGCCTTGACACGTATCCCAGGTATCGGTAAAAAGACCGCTCAGCGTTTATTAATTGAGCTAAAAGATAAGCTGAAAA
ATATTGAAGTCGACAGCAGTCATTTAGAATTTGCTATGCAGCCGGCACCAATATCCGCTGAAGGCAGTATCATTGCGGAA
GTTGAAGGCGCGTTGATTAGCTTGGGCTATAAAGAAAGAGAAGCGCAGCAAGCCATTAAGGCGGCAAAAAGTAATGGCGA
GACATTTGCAGATACACAGAGCTTGTTAAAAGCCACTCTGCAACAGTTTCAAAGTTTTAAGTAG

Upstream 100 bases:

>100_bases
TGGCGTGCTGCGTTCTCAGAGGCTGCGTAAAATTCATACCAATAGCGCTATAACACTTTTGTAATAAACTCACTATAGTC
TGTATAAGAGGTCGTGGATT

Downstream 100 bases:

>100_bases
CGACATTTTTATAATAAAAAAGCGATTAAAAATAAGCGACATTAAATGTCGCTTATTTTCGTTTTAGCCAGTGCTTTATG
ATGTTTTGCATGACTTATGC

Product: Holliday junction DNA helicase RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIGLINGQVQYLMAPTACVMTTSGVGYDIELPLPSFCQLRLNEQASIWTHFHVREDAQLLYGFIDRKERDVFRQLIKING
VGAKMALAMLSAMSAAELKMHVEQDSEDALTRIPGIGKKTAQRLLIELKDKLKNIEVDSSHLEFAMQPAPISAEGSIIAE
VEGALISLGYKEREAQQAIKAAKSNGETFADTQSLLKATLQQFQSFK

Sequences:

>Translated_207_residues
MIGLINGQVQYLMAPTACVMTTSGVGYDIELPLPSFCQLRLNEQASIWTHFHVREDAQLLYGFIDRKERDVFRQLIKING
VGAKMALAMLSAMSAAELKMHVEQDSEDALTRIPGIGKKTAQRLLIELKDKLKNIEVDSSHLEFAMQPAPISAEGSIIAE
VEGALISLGYKEREAQQAIKAAKSNGETFADTQSLLKATLQQFQSFK
>Mature_207_residues
MIGLINGQVQYLMAPTACVMTTSGVGYDIELPLPSFCQLRLNEQASIWTHFHVREDAQLLYGFIDRKERDVFRQLIKING
VGAKMALAMLSAMSAAELKMHVEQDSEDALTRIPGIGKKTAQRLLIELKDKLKNIEVDSSHLEFAMQPAPISAEGSIIAE
VEGALISLGYKEREAQQAIKAAKSNGETFADTQSLLKATLQQFQSFK

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

Organism=Escherichia coli, GI1788168, Length=209, Percent_Identity=40.1913875598086, Blast_Score=143, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 22871; Mature: 22871

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLINGQVQYLMAPTACVMTTSGVGYDIELPLPSFCQLRLNEQASIWTHFHVREDAQLL
CEEECCCCEEEEECCHHHEEEECCCCEEEECCCCHHHHEEECCCCEEEEEEEECHHHHHH
YGFIDRKERDVFRQLIKINGVGAKMALAMLSAMSAAELKMHVEQDSEDALTRIPGIGKKT
HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHH
AQRLLIELKDKLKNIEVDSSHLEFAMQPAPISAEGSIIAEVEGALISLGYKEREAQQAIK
HHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHH
AAKSNGETFADTQSLLKATLQQFQSFK
HHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGLINGQVQYLMAPTACVMTTSGVGYDIELPLPSFCQLRLNEQASIWTHFHVREDAQLL
CEEECCCCEEEEECCHHHEEEECCCCEEEECCCCHHHHEEECCCCEEEEEEEECHHHHHH
YGFIDRKERDVFRQLIKINGVGAKMALAMLSAMSAAELKMHVEQDSEDALTRIPGIGKKT
HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHH
AQRLLIELKDKLKNIEVDSSHLEFAMQPAPISAEGSIIAEVEGALISLGYKEREAQQAIK
HHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHH
AAKSNGETFADTQSLLKATLQQFQSFK
HHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA