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The map label for this gene is ctpA [H]

Identifier: 93005504

GI number: 93005504

Start: 798573

End: 800135

Strand: Direct

Name: ctpA [H]

Synonym: Pcryo_0674

Alternate gene names: 93005504

Gene position: 798573-800135 (Clockwise)

Preceding gene: 93005503

Following gene: 93005508

Centisome position: 26.1

GC content: 43.38

Gene sequence:

>1563_bases
ATGCATTTTAACACTCCTATCAGTCGTACATTTCCATTGACCTCTAAAAGACTCGAGCAATCAATGAGTACGATATCTAG
CTACACTAATGTCTTAAAGCCGACGCTTATCGTGGGTTTTCTGGGCTTAAGTATGATTGCTATACCAGCGCAAGCGGCTG
TCAAAGATACTGCGGCAGGGCGCAACGCAAGTCGTACGGCAAGCTTACAACTCATCAGTTTAAATGCTGATAATGTACCA
TTAGATAACGGTGCAGATGATCTATCAGATATTGCTGATATGCTTGAATCTGCTGATCAAGCTGACGATTTAATTGATAG
TGTGGCGGATGAAAGTGTGCTGAACAATGAATCGCCTATTATTAATACCGACATTCCTGCCGAAGTGGCTCAAGTGTCAT
TAAATGCTATTTCTCCTGAAACGTTGAAGACCTTTGTTGCTTTGATTGATTTGGTGCGTCGTGAATATGTCGATACGGTT
AATGATGAAGAACTGTTTAATAATGCTATGAGCGGCATGTTGACCAAGCTCGATAGCCATGCGGAATTTTTGGACGCTGA
AGCTTATGAGAATCTGCGTGCTTTTACGGAAGGCGATGTCGGCGATATTGGCATCAAAGTTGAGTATCAATCAGCCTTGG
GTTATTGGGTCATCACTGAGGTACTGGATGATTCACCTGCCGATAAAAAGGGTATCGCAGTTGGCGATTATCTACACCAA
GTCGATGAGTTTAAGCTTGGCGAAGATGAAGAAAGTAACGATATCGAGCAGCTTTTGACAGGCATTGCCGGTACGCAAGT
AGATGTGGTGACGTCCAAGGCAGGACGCCGTAAACATGTCACCACTTTACAACGTAATAATAGCCATCCTCAAATTATTG
AAACTCGTTTTGTAGATGGTATGGCCATTGTTAGGTTGCCAGCATTTCAAAATAATAGCCGTGAAAAACTGCTACAAAGT
TTGATCGATTTGGATAAGCCTGTCACAGGAATACTACTAGATTTACGTGATAATCCAGGTGGCGTATTGGCATCCGCTGT
GAGCGTTGCTAGCCTATTTATGACAGATACGGATGTGGTACAGATAAAGAGTCGCCAAGCAGATTCCCGTACATTGTCGA
CTAGAGGTGCAGCATTGCTTGAGGCACTACCGGTAGTGGTGTTGCAAAATCGCTATTCGGCGTCAGCGGCAGAAGTGTTG
ACCAGTAGCTTGCAAGCGCAAAAGCGTGGCACTGTCTTAGGTGAGGTCAGTTACGGCAAAGGCTCTGTACAATCGGTGAT
ACCGCTTAACGATGAGCAAGCGGTCAAGCTTACGGTTGCCAACTATATGACTGCTTCAGGTAAAAAGATAGATGGTATTG
GGGTAGAGCCTGATATCGCTCTATCGGGCAGTGAAAGCACGTGGGAGCAGCAAGCGCTTGATTTATTACGAAAGAAAGCA
CTTACTTCAGGTATTCGATTTGTACGCTCTGAGAAAAAGCCCGATCCTAAAAATAGTATTATTAAAAATAATACAGCTAT
AAAGAATGTTATTGAAAAACCAACATCTAAGGAAAAGCTCTAA

Upstream 100 bases:

>100_bases
GGTGCTTGATGCTATCTTATGGGCTATTATTCAATAATAACCATATAACAATCCTATAATAATGATGGCTTAACTTTGGA
CAAATTTTCAGGTGATTTTT

Downstream 100 bases:

>100_bases
TCTAGTCACAATTCTATATCAAAGCCCCTTATTCAGCTTGATCTTCTGCAATCTCAAGTTTGGTCATACGATAGCGTAAG
GATCGAAAAGTGGTTCCTAA

Product: C-terminal processing peptidase

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MHFNTPISRTFPLTSKRLEQSMSTISSYTNVLKPTLIVGFLGLSMIAIPAQAAVKDTAAGRNASRTASLQLISLNADNVP
LDNGADDLSDIADMLESADQADDLIDSVADESVLNNESPIINTDIPAEVAQVSLNAISPETLKTFVALIDLVRREYVDTV
NDEELFNNAMSGMLTKLDSHAEFLDAEAYENLRAFTEGDVGDIGIKVEYQSALGYWVITEVLDDSPADKKGIAVGDYLHQ
VDEFKLGEDEESNDIEQLLTGIAGTQVDVVTSKAGRRKHVTTLQRNNSHPQIIETRFVDGMAIVRLPAFQNNSREKLLQS
LIDLDKPVTGILLDLRDNPGGVLASAVSVASLFMTDTDVVQIKSRQADSRTLSTRGAALLEALPVVVLQNRYSASAAEVL
TSSLQAQKRGTVLGEVSYGKGSVQSVIPLNDEQAVKLTVANYMTASGKKIDGIGVEPDIALSGSESTWEQQALDLLRKKA
LTSGIRFVRSEKKPDPKNSIIKNNTAIKNVIEKPTSKEKL

Sequences:

>Translated_520_residues
MHFNTPISRTFPLTSKRLEQSMSTISSYTNVLKPTLIVGFLGLSMIAIPAQAAVKDTAAGRNASRTASLQLISLNADNVP
LDNGADDLSDIADMLESADQADDLIDSVADESVLNNESPIINTDIPAEVAQVSLNAISPETLKTFVALIDLVRREYVDTV
NDEELFNNAMSGMLTKLDSHAEFLDAEAYENLRAFTEGDVGDIGIKVEYQSALGYWVITEVLDDSPADKKGIAVGDYLHQ
VDEFKLGEDEESNDIEQLLTGIAGTQVDVVTSKAGRRKHVTTLQRNNSHPQIIETRFVDGMAIVRLPAFQNNSREKLLQS
LIDLDKPVTGILLDLRDNPGGVLASAVSVASLFMTDTDVVQIKSRQADSRTLSTRGAALLEALPVVVLQNRYSASAAEVL
TSSLQAQKRGTVLGEVSYGKGSVQSVIPLNDEQAVKLTVANYMTASGKKIDGIGVEPDIALSGSESTWEQQALDLLRKKA
LTSGIRFVRSEKKPDPKNSIIKNNTAIKNVIEKPTSKEKL
>Mature_520_residues
MHFNTPISRTFPLTSKRLEQSMSTISSYTNVLKPTLIVGFLGLSMIAIPAQAAVKDTAAGRNASRTASLQLISLNADNVP
LDNGADDLSDIADMLESADQADDLIDSVADESVLNNESPIINTDIPAEVAQVSLNAISPETLKTFVALIDLVRREYVDTV
NDEELFNNAMSGMLTKLDSHAEFLDAEAYENLRAFTEGDVGDIGIKVEYQSALGYWVITEVLDDSPADKKGIAVGDYLHQ
VDEFKLGEDEESNDIEQLLTGIAGTQVDVVTSKAGRRKHVTTLQRNNSHPQIIETRFVDGMAIVRLPAFQNNSREKLLQS
LIDLDKPVTGILLDLRDNPGGVLASAVSVASLFMTDTDVVQIKSRQADSRTLSTRGAALLEALPVVVLQNRYSASAAEVL
TSSLQAQKRGTVLGEVSYGKGSVQSVIPLNDEQAVKLTVANYMTASGKKIDGIGVEPDIALSGSESTWEQQALDLLRKKA
LTSGIRFVRSEKKPDPKNSIIKNNTAIKNVIEKPTSKEKL

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=340, Percent_Identity=27.3529411764706, Blast_Score=105, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 56284; Mature: 56284

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFNTPISRTFPLTSKRLEQSMSTISSYTNVLKPTLIVGFLGLSMIAIPAQAAVKDTAAG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
RNASRTASLQLISLNADNVPLDNGADDLSDIADMLESADQADDLIDSVADESVLNNESPI
CCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCE
INTDIPAEVAQVSLNAISPETLKTFVALIDLVRREYVDTVNDEELFNNAMSGMLTKLDSH
ECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AEFLDAEAYENLRAFTEGDVGDIGIKVEYQSALGYWVITEVLDDSPADKKGIAVGDYLHQ
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHH
VDEFKLGEDEESNDIEQLLTGIAGTQVDVVTSKAGRRKHVTTLQRNNSHPQIIETRFVDG
HHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCEEHHHHHCC
MAIVRLPAFQNNSREKLLQSLIDLDKPVTGILLDLRDNPGGVLASAVSVASLFMTDTDVV
EEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHE
QIKSRQADSRTLSTRGAALLEALPVVVLQNRYSASAAEVLTSSLQAQKRGTVLGEVSYGK
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
GSVQSVIPLNDEQAVKLTVANYMTASGKKIDGIGVEPDIALSGSESTWEQQALDLLRKKA
CCCCEEECCCCCCEEEEEEEHHHHCCCCEECCCCCCCCEEECCCCCHHHHHHHHHHHHHH
LTSGIRFVRSEKKPDPKNSIIKNNTAIKNVIEKPTSKEKL
HHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHFNTPISRTFPLTSKRLEQSMSTISSYTNVLKPTLIVGFLGLSMIAIPAQAAVKDTAAG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
RNASRTASLQLISLNADNVPLDNGADDLSDIADMLESADQADDLIDSVADESVLNNESPI
CCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCE
INTDIPAEVAQVSLNAISPETLKTFVALIDLVRREYVDTVNDEELFNNAMSGMLTKLDSH
ECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AEFLDAEAYENLRAFTEGDVGDIGIKVEYQSALGYWVITEVLDDSPADKKGIAVGDYLHQ
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHH
VDEFKLGEDEESNDIEQLLTGIAGTQVDVVTSKAGRRKHVTTLQRNNSHPQIIETRFVDG
HHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCEEHHHHHCC
MAIVRLPAFQNNSREKLLQSLIDLDKPVTGILLDLRDNPGGVLASAVSVASLFMTDTDVV
EEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHE
QIKSRQADSRTLSTRGAALLEALPVVVLQNRYSASAAEVLTSSLQAQKRGTVLGEVSYGK
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
GSVQSVIPLNDEQAVKLTVANYMTASGKKIDGIGVEPDIALSGSESTWEQQALDLLRKKA
CCCCEEECCCCCCEEEEEEEHHHHCCCCEECCCCCCCCEEECCCCCHHHHHHHHHHHHHH
LTSGIRFVRSEKKPDPKNSIIKNNTAIKNVIEKPTSKEKL
HHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]