Click here to switch to the map view.

The map label for this gene is pbpG [H]

Identifier: 93005508

GI number: 93005508

Start: 804883

End: 805977

Strand: Direct

Name: pbpG [H]

Synonym: Pcryo_0678

Alternate gene names: 93005508

Gene position: 804883-805977 (Clockwise)

Preceding gene: 93005504

Following gene: 93005509

Centisome position: 26.3

GC content: 45.57

Gene sequence:

>1095_bases
ATGAAGCAACTACCATTAACCAAACAGCAATTAATCGCTGCTATGATTTCATTGAGTTTGGGCAGTGTCGCACAAGCCGC
ACTTACAATTAATGGTAGCGCCAGCGCTGAGTCTAGTGCTCGCTTGAGCTGGGGCGGTGCCGATAGCTTGTCTGAAGCGC
GCAGTATCATGTCTAGGTCTGGCAACAGCTCTACGATTAAAAAAATAGATAACGGTTCTGGTACAACCAGTATTACCAAT
ACGACCAGTTTTGGTAGTAGTAATAACAACAGTTATAATAATGCCAATAGCTACAACACCACGTATCGCGGTAGTTTTGG
CAACAGTAATATGATTCCGATCAGCACTGATTCGCGCAGTGTCGCGGTTATTGATGCAGAAACCGGTGAGTCAATTTATC
AAAAAGATGCGGATATCGCGCGTCCAATGGCCAGTATTACCAAGGTAATGACGGCTATCGTGGTACTTGATGCCGGCTTA
GATATGCGTGAAGAGCTAACACTTGATCCAGAAGATTTCGTTGGTCCAAAGCGTGCCAGCTCTAACCTAAAGTCAGGCGA
TCGGCTCAATCGCGCTGAGATGCTGTTAATGGCATTAATGAAATCAGAAAATCCTGCAGCAAAAAGTCTTGCCCGTAATT
ATCCGGGTGGCTATAGCGCCTTTATACGCGCGATGAACCGTAAAGCACAAGAGCTTGGCATGAGTACCGCTTTCTTTGGT
GATCCAACGGGTCTGGATAAGCGCAACGTTGCTTCCTCAAATGACTTGGTTAAAATGGTTCGTGCTGCTGGTAACTATGA
CGTGATTCGTCGTTTCTCAACCACTAAGAGCTATGATTTTTTTGTCTCTAACTTCTCAAGTGGTAACCGTACTTACAAAG
CCAATAACACCAGCAGCTTAGTTCGTGATGGCAGCTATCCTATCGGCATCTCAAAGACAGGCTTTATCAATGAAGCAGGG
CGTTGTGTTGTCATGGAGACGCGCGTCAATAATCGTCCCGCTATTATCGTGATTTTGGGTGCCAATAGTTCAGCAACGCG
CTGGGGTGATGCCAAAAATATCTTAAATAGCTTAGCAACACGTCGCACGGTATAA

Upstream 100 bases:

>100_bases
AAACTCTATGTGAGTATCTACAAACACACCTATAAACGCTACGTACGTAGTTGGCGTCAGTCAGTATGTCACTGATGACA
GCACGTAAGCAGGAGGCAGA

Downstream 100 bases:

>100_bases
GATTACAGCGTTAAACGCGCAGTATCAAAAGACATTTATAATAAAAAGGCTGTTATGTGATATAACAGCCTTTTTATTAT
GTCAAAAACGTATTGATGTT

Product: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 7; PBP-7 [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKQLPLTKQQLIAAMISLSLGSVAQAALTINGSASAESSARLSWGGADSLSEARSIMSRSGNSSTIKKIDNGSGTTSITN
TTSFGSSNNNSYNNANSYNTTYRGSFGNSNMIPISTDSRSVAVIDAETGESIYQKDADIARPMASITKVMTAIVVLDAGL
DMREELTLDPEDFVGPKRASSNLKSGDRLNRAEMLLMALMKSENPAAKSLARNYPGGYSAFIRAMNRKAQELGMSTAFFG
DPTGLDKRNVASSNDLVKMVRAAGNYDVIRRFSTTKSYDFFVSNFSSGNRTYKANNTSSLVRDGSYPIGISKTGFINEAG
RCVVMETRVNNRPAIIVILGANSSATRWGDAKNILNSLATRRTV

Sequences:

>Translated_364_residues
MKQLPLTKQQLIAAMISLSLGSVAQAALTINGSASAESSARLSWGGADSLSEARSIMSRSGNSSTIKKIDNGSGTTSITN
TTSFGSSNNNSYNNANSYNTTYRGSFGNSNMIPISTDSRSVAVIDAETGESIYQKDADIARPMASITKVMTAIVVLDAGL
DMREELTLDPEDFVGPKRASSNLKSGDRLNRAEMLLMALMKSENPAAKSLARNYPGGYSAFIRAMNRKAQELGMSTAFFG
DPTGLDKRNVASSNDLVKMVRAAGNYDVIRRFSTTKSYDFFVSNFSSGNRTYKANNTSSLVRDGSYPIGISKTGFINEAG
RCVVMETRVNNRPAIIVILGANSSATRWGDAKNILNSLATRRTV
>Mature_364_residues
MKQLPLTKQQLIAAMISLSLGSVAQAALTINGSASAESSARLSWGGADSLSEARSIMSRSGNSSTIKKIDNGSGTTSITN
TTSFGSSNNNSYNNANSYNTTYRGSFGNSNMIPISTDSRSVAVIDAETGESIYQKDADIARPMASITKVMTAIVVLDAGL
DMREELTLDPEDFVGPKRASSNLKSGDRLNRAEMLLMALMKSENPAAKSLARNYPGGYSAFIRAMNRKAQELGMSTAFFG
DPTGLDKRNVASSNDLVKMVRAAGNYDVIRRFSTTKSYDFFVSNFSSGNRTYKANNTSSLVRDGSYPIGISKTGFINEAG
RCVVMETRVNNRPAIIVILGANSSATRWGDAKNILNSLATRRTV

Specific function: Cell wall formation. May play a specialized role in remodeling the cell wall. Specifically hydrolyze the DD- diaminopimelate-alanine bonds in high-molecular-mass murein sacculi [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=237, Percent_Identity=42.6160337552743, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787062, Length=250, Percent_Identity=27.2, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 39003; Mature: 39003

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLPLTKQQLIAAMISLSLGSVAQAALTINGSASAESSARLSWGGADSLSEARSIMSRS
CCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHCC
GNSSTIKKIDNGSGTTSITNTTSFGSSNNNSYNNANSYNTTYRGSFGNSNMIPISTDSRS
CCCHHHHEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCE
VAVIDAETGESIYQKDADIARPMASITKVMTAIVVLDAGLDMREELTLDPEDFVGPKRAS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHCCCHHHC
SNLKSGDRLNRAEMLLMALMKSENPAAKSLARNYPGGYSAFIRAMNRKAQELGMSTAFFG
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECC
DPTGLDKRNVASSNDLVKMVRAAGNYDVIRRFSTTKSYDFFVSNFSSGNRTYKANNTSSL
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCHHH
VRDGSYPIGISKTGFINEAGRCVVMETRVNNRPAIIVILGANSSATRWGDAKNILNSLAT
HHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
RRTV
HCCC
>Mature Secondary Structure
MKQLPLTKQQLIAAMISLSLGSVAQAALTINGSASAESSARLSWGGADSLSEARSIMSRS
CCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHCC
GNSSTIKKIDNGSGTTSITNTTSFGSSNNNSYNNANSYNTTYRGSFGNSNMIPISTDSRS
CCCHHHHEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCE
VAVIDAETGESIYQKDADIARPMASITKVMTAIVVLDAGLDMREELTLDPEDFVGPKRAS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHCCCHHHC
SNLKSGDRLNRAEMLLMALMKSENPAAKSLARNYPGGYSAFIRAMNRKAQELGMSTAFFG
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECC
DPTGLDKRNVASSNDLVKMVRAAGNYDVIRRFSTTKSYDFFVSNFSSGNRTYKANNTSSL
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCHHH
VRDGSYPIGISKTGFINEAGRCVVMETRVNNRPAIIVILGANSSATRWGDAKNILNSLAT
HHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
RRTV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 6386470; 7721700; 7925376 [H]