Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is surE
Identifier: 93005490
GI number: 93005490
Start: 782656
End: 783465
Strand: Direct
Name: surE
Synonym: Pcryo_0660
Alternate gene names: 93005490
Gene position: 782656-783465 (Clockwise)
Preceding gene: 93005487
Following gene: 93005491
Centisome position: 25.58
GC content: 44.81
Gene sequence:
>810_bases ATGAAGATTTTAATGAGCAATGACGATGGGGTTTATGCACCAGGTTTGCTGGCACTATATGAGGCATTATCTACTATGGC CGAGGTCATGGTTGTCGCGCCAAATAGCGAGCAAAGTGGCTGCGCCAGTGCATTAAGTATCACCACACCCTTATATACGC ATCAATTGCCTTCTGGTTTTATTGCTGTCAATGGCACACCAGCTGACTGTATCTATCTGGCATTAAACGAAATATATTCT GACACGGATTTTGATTGTGTGATTACGGGGATCAATTCAGGTGCCAATCTTGGTCAAGACGTTTTGTTTTCAGGCACTTT TGGGGCGGCATTAACCGCTCAGTTATTTGGTATACCCGCTATTGCGACCTCATTGGTAGGCGGTGGGGCAAAAAGCAGTG AGCAGGAATGTGAGCGTCATTATCAAATGGCAGCAAGTGAGATTGTGAAATTATTGACAGATACGCCAATATTGGATATT TGCAAAAATTTGCCCTATCACGTATTAAACGTTAATATTCCTGATGTGAGTAATGCTGATGAGATTAACGGTCGCAAAAT GACAGTTTTGGGGCATAGGAAGATAGCGCGTCCTGTCCACCATGTGGTAGATCCACGCGGGCGAGATGCATATTGGTTAT CACTACGCAAGCGTCAGGATATATGGGCAGATAATACTGATCATGTTTCGTCTGGTACTACTATGACTGATGATCAAGCG GTTGCCGCAGGTTACATCAGTCTATCGCCTGTACGTTTGCACCATACGCCAGCCGCCACACTCGATATGCTATCAGCGTT AATGCTGTAA
Upstream 100 bases:
>100_bases AGTAGAATGACCTTAGTGCCAATAGCGGTGATTATAGCAACTTTACGCAAATAACGTAGATAAGTGGATGAACGGTCATT CATAAATAGATTGAGTAAAT
Downstream 100 bases:
>100_bases GATGAATCGAATATTGATGATGGCAGCTAAGATAGCTAAACACTTAAACGGTATAACAGTTAGCAAAATGCTTGTGAGTC ACACAAGGAGTTTGTACGTA
Product: stationary-phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKILMSNDDGVYAPGLLALYEALSTMAEVMVVAPNSEQSGCASALSITTPLYTHQLPSGFIAVNGTPADCIYLALNEIYS DTDFDCVITGINSGANLGQDVLFSGTFGAALTAQLFGIPAIATSLVGGGAKSSEQECERHYQMAASEIVKLLTDTPILDI CKNLPYHVLNVNIPDVSNADEINGRKMTVLGHRKIARPVHHVVDPRGRDAYWLSLRKRQDIWADNTDHVSSGTTMTDDQA VAAGYISLSPVRLHHTPAATLDMLSALML
Sequences:
>Translated_269_residues MKILMSNDDGVYAPGLLALYEALSTMAEVMVVAPNSEQSGCASALSITTPLYTHQLPSGFIAVNGTPADCIYLALNEIYS DTDFDCVITGINSGANLGQDVLFSGTFGAALTAQLFGIPAIATSLVGGGAKSSEQECERHYQMAASEIVKLLTDTPILDI CKNLPYHVLNVNIPDVSNADEINGRKMTVLGHRKIARPVHHVVDPRGRDAYWLSLRKRQDIWADNTDHVSSGTTMTDDQA VAAGYISLSPVRLHHTPAATLDMLSALML >Mature_269_residues MKILMSNDDGVYAPGLLALYEALSTMAEVMVVAPNSEQSGCASALSITTPLYTHQLPSGFIAVNGTPADCIYLALNEIYS DTDFDCVITGINSGANLGQDVLFSGTFGAALTAQLFGIPAIATSLVGGGAKSSEQECERHYQMAASEIVKLLTDTPILDI CKNLPYHVLNVNIPDVSNADEINGRKMTVLGHRKIARPVHHVVDPRGRDAYWLSLRKRQDIWADNTDHVSSGTTMTDDQA VAAGYISLSPVRLHHTPAATLDMLSALML
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=269, Percent_Identity=36.4312267657993, Blast_Score=150, Evalue=8e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_PSYCK (Q1QD10)
Other databases:
- EMBL: CP000323 - RefSeq: YP_579927.1 - ProteinModelPortal: Q1QD10 - SMR: Q1QD10 - STRING: Q1QD10 - GeneID: 4033546 - GenomeReviews: CP000323_GR - KEGG: pcr:Pcryo_0660 - NMPDR: fig|335284.3.peg.23 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: SEQECER - PhylomeDB: Q1QD10 - BioCyc: PCRY335284:PCRYO_0660-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 28818; Mature: 28818
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILMSNDDGVYAPGLLALYEALSTMAEVMVVAPNSEQSGCASALSITTPLYTHQLPSGF CEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCE IAVNGTPADCIYLALNEIYSDTDFDCVITGINSGANLGQDVLFSGTFGAALTAQLFGIPA EEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHEECCCHHHHHHHHHHHHHH IATSLVGGGAKSSEQECERHYQMAASEIVKLLTDTPILDICKNLPYHVLNVNIPDVSNAD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCCCC EINGRKMTVLGHRKIARPVHHVVDPRGRDAYWLSLRKRQDIWADNTDHVSSGTTMTDDQA CCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCEECCCCH VAAGYISLSPVRLHHTPAATLDMLSALML HHEEEEEECEEEEECCCHHHHHHHHHHHC >Mature Secondary Structure MKILMSNDDGVYAPGLLALYEALSTMAEVMVVAPNSEQSGCASALSITTPLYTHQLPSGF CEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCE IAVNGTPADCIYLALNEIYSDTDFDCVITGINSGANLGQDVLFSGTFGAALTAQLFGIPA EEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHEECCCHHHHHHHHHHHHHH IATSLVGGGAKSSEQECERHYQMAASEIVKLLTDTPILDICKNLPYHVLNVNIPDVSNAD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCCCC EINGRKMTVLGHRKIARPVHHVVDPRGRDAYWLSLRKRQDIWADNTDHVSSGTTMTDDQA CCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCEECCCCH VAAGYISLSPVRLHHTPAATLDMLSALML HHEEEEEECEEEEECCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA