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The map label for this gene is ygeR [C]

Identifier: 93005491

GI number: 93005491

Start: 783589

End: 784401

Strand: Direct

Name: ygeR [C]

Synonym: Pcryo_0661

Alternate gene names: 93005491

Gene position: 783589-784401 (Clockwise)

Preceding gene: 93005490

Following gene: 93005492

Centisome position: 25.61

GC content: 48.34

Gene sequence:

>813_bases
ATGAAGAAGCTTATTGCTGGATCGCGATTTATCACGGTGGCATTGCTGGGCACGATGGCGGCTGCCACAGTAACGATGGT
AGGTTGCGCCACCAAACCCACTTACCAATCAGCCAACCAAGCGGGACCGAAGATTATTACCAATAATCAAGGGGTTCCTA
ACTATCATCGTGTGCAGCGCGGCGATACGGTCAGTCAAGTGGCGGCGCGCTATAATCTCAATTACCGTCAAATTGGTTCA
CTGAATGGCCTAGACAGTAAATACACCATTTATAGTGGTCAGTGGCTCAAACTATGGCAAGGTGAGCCGGCAAGCGCTAA
TAATAGTAATCGCTACAACGCTTCGAACAATGACTCTGCACCTACACAGCCAACCTATACACCGCCTGTGAGCAGCACGC
CTAACTATTCACAACCGCCCGTCTATGAAGTGACTGCCAATGCAACGTCAGGCTATGAGTATCCGACTCGCAATCAAATA
ACCCGCAATTTCGATGCAGCATCTAGCACGATGGGCATGTGGTTTGCTGGTAACGTAGGTGATCCAGTGCAAGCAAGTCA
ATCAGGTACGGTTCTTTATTCGGGTAACGGTCTGCCAGAGTATGGCAACTTGATTATGATTCGTCATAGTGACAACTATA
TCACTGCTTATGCCCATAACAGCCAGCTGTTAGTGAAAGAGGGCGATAGCGTTCAGCGTGGTCAACGTATCGCAAATATG
GGTAATAGTGGTCAGACCAATCAAGTGGGTTTGGAATTTCAAGTACGCTTAAATGGCAACCCTATCGATCCACGAGCGGT
ACTAGGGCGTTAA

Upstream 100 bases:

>100_bases
CAGCTAAGATAGCTAAACACTTAAACGGTATAACAGTTAGCAAAATGCTTGTGAGTCACACAAGGAGTTTGTACGTAACA
TAAAGAATAGGAAATCTTGT

Downstream 100 bases:

>100_bases
ATTTATTATTGTTTGGCAATTAAATGGAATTATCTAAGCCACATTGCACCTTACTTACGGATACTTGAGACCTCTTATGC
GATTAAATAAACACTACCTT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKKLIAGSRFITVALLGTMAAATVTMVGCATKPTYQSANQAGPKIITNNQGVPNYHRVQRGDTVSQVAARYNLNYRQIGS
LNGLDSKYTIYSGQWLKLWQGEPASANNSNRYNASNNDSAPTQPTYTPPVSSTPNYSQPPVYEVTANATSGYEYPTRNQI
TRNFDAASSTMGMWFAGNVGDPVQASQSGTVLYSGNGLPEYGNLIMIRHSDNYITAYAHNSQLLVKEGDSVQRGQRIANM
GNSGQTNQVGLEFQVRLNGNPIDPRAVLGR

Sequences:

>Translated_270_residues
MKKLIAGSRFITVALLGTMAAATVTMVGCATKPTYQSANQAGPKIITNNQGVPNYHRVQRGDTVSQVAARYNLNYRQIGS
LNGLDSKYTIYSGQWLKLWQGEPASANNSNRYNASNNDSAPTQPTYTPPVSSTPNYSQPPVYEVTANATSGYEYPTRNQI
TRNFDAASSTMGMWFAGNVGDPVQASQSGTVLYSGNGLPEYGNLIMIRHSDNYITAYAHNSQLLVKEGDSVQRGQRIANM
GNSGQTNQVGLEFQVRLNGNPIDPRAVLGR
>Mature_270_residues
MKKLIAGSRFITVALLGTMAAATVTMVGCATKPTYQSANQAGPKIITNNQGVPNYHRVQRGDTVSQVAARYNLNYRQIGS
LNGLDSKYTIYSGQWLKLWQGEPASANNSNRYNASNNDSAPTQPTYTPPVSSTPNYSQPPVYEVTANATSGYEYPTRNQI
TRNFDAASSTMGMWFAGNVGDPVQASQSGTVLYSGNGLPEYGNLIMIRHSDNYITAYAHNSQLLVKEGDSVQRGQRIANM
GNSGQTNQVGLEFQVRLNGNPIDPRAVLGR

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87082174, Length=210, Percent_Identity=35.2380952380952, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1789099, Length=114, Percent_Identity=40.3508771929825, Blast_Score=98, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 29269; Mature: 29269

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIAGSRFITVALLGTMAAATVTMVGCATKPTYQSANQAGPKIITNNQGVPNYHRVQR
CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHCCCEEEECCCCCCCHHHHCC
GDTVSQVAARYNLNYRQIGSLNGLDSKYTIYSGQWLKLWQGEPASANNSNRYNASNNDSA
CCHHHHHHHHHCCCHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC
PTQPTYTPPVSSTPNYSQPPVYEVTANATSGYEYPTRNQITRNFDAASSTMGMWFAGNVG
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCC
DPVQASQSGTVLYSGNGLPEYGNLIMIRHSDNYITAYAHNSQLLVKEGDSVQRGQRIANM
CCCCCCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCEEEEECCCCHHHHHHHHHC
GNSGQTNQVGLEFQVRLNGNPIDPRAVLGR
CCCCCCCEEEEEEEEEECCCCCCCHHCCCC
>Mature Secondary Structure
MKKLIAGSRFITVALLGTMAAATVTMVGCATKPTYQSANQAGPKIITNNQGVPNYHRVQR
CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHCCCEEEECCCCCCCHHHHCC
GDTVSQVAARYNLNYRQIGSLNGLDSKYTIYSGQWLKLWQGEPASANNSNRYNASNNDSA
CCHHHHHHHHHCCCHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC
PTQPTYTPPVSSTPNYSQPPVYEVTANATSGYEYPTRNQITRNFDAASSTMGMWFAGNVG
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCC
DPVQASQSGTVLYSGNGLPEYGNLIMIRHSDNYITAYAHNSQLLVKEGDSVQRGQRIANM
CCCCCCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCEEEEECCCCHHHHHHHHHC
GNSGQTNQVGLEFQVRLNGNPIDPRAVLGR
CCCCCCCEEEEEEEEEECCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7959068; 10984043 [H]