Click here to switch to the map view.

The map label for this gene is 93005451

Identifier: 93005451

GI number: 93005451

Start: 738406

End: 739833

Strand: Direct

Name: 93005451

Synonym: Pcryo_0621

Alternate gene names: NA

Gene position: 738406-739833 (Clockwise)

Preceding gene: 93005450

Following gene: 93005452

Centisome position: 24.13

GC content: 30.39

Gene sequence:

>1428_bases
ATGTTAAAAAGACTTTTCAAAGACAGTGTTACTTATACTCTTCCTAGTTTGATTTCAAGAGGAATGTCATTTTTTTTAAT
CCCACTCTATACAAAGGTATTGACAACAGCTGACTATGGATCTTTTGATCTATTCCTTATTTTTGTAAATATAATTAACC
TGACTATTGCATTAGAAGTTTCCCAAGGTTTAGCACGTTACTTTACTTCTGAAGATAATACTAATTCGAAAGTTCTTTAT
GCATCTTCGGCTTTTTGGTTTACATTCGCTGTTTATACAATATTTTCTGTATTGTTGTTAATATTTCATAAAAAACTTTC
TTTTATGGTTATGGGTCAACTAAACGTTGAAAACGCTTTTATACTAGGTATTCTATATATTTGGTCTAACGGCTTGTTTT
ATCTGATCCAAAACCAATTCAGATGGGAATTGCGTAGCAAGGAATACGCAGTTATTAGTATCATTATGTCTGTAGCTACT
GCATTCGTATCTGTTTTAGCAGCTTATTTCTTAGACTACGGTTTAGAAGGGCTCTTATTTGGTCTGTTAATTGGTAATTT
GATTGGTGGTATTTTTGGTTTATGGTTGTTACGTAATACCTTTAGATTTAGATTTAGTTTGATAAAACTGAAAGAGATGC
TTGTTTTCTCAATACCGTTAGTTTTCTCTGGTGTAGCAGTATGGTTAAGTCTTTATATTGATCGTATTATGATTAAACAT
CTTATGACCATTAGTGATGTAGGTTTATACGGTCTTGGTTATCGTGTATCAAGTATTGCTGGTCTAGCTATGGTTGGTTT
TCAAGGGGCTTTAACCCCTCTCATTTATAAACATTATCATGAAAAAACAACGCCTCCTCAACTTGCTCGTATATTCAGGT
ATTTCGTTACATTGATACTTCTTATATTTATTTTAATTAGTTTTTTTGCTGAAAACATATTACACCTAATAGTTACAGAA
GAGTTTTACTATAGTTATAGTGTTATCATTTTTTTAGTACCTGCTATTATATTATCTAATATGTATATATTTGCGCCAGG
CATGGCTATTGCCAAGAAAACGTCTTATTTTGTTATTGTAAATATCATAGGTGCAACTTTGAATATTGTACTCAACTATG
TACTTATACCTATTTTCGGGATTCAAGGTGCTGCAGTTGCAACGCTGATTAGCTATTTTATTGTTTTCACTATCTACATG
ATTCTAAGTCAAAAGATTTACTATGTTCCTCATGATTTTAAACCTATCATTGCTAGTACTTTATTAGTTTCACTATTAGC
ATGGTTTATCCCTATTATTCATGAGAGCTTCTATTTATTACTAATTTATAAATCTATAGCCCTAATTTTTTGTATTCTTT
TATTTTTATTAGCTGGCTTGATATCGTTAAAAGACTTTAAACAATTTCGAGATTTATTAAAGAAATAA

Upstream 100 bases:

>100_bases
CCGAATGATTGTTAATTATGGTATTGACTCTCTACAATTAAAAGATCGTTCTGATCTTGAACATGCATTTATTGAATTTA
TTAGTAAAGATTAAAATACT

Downstream 100 bases:

>100_bases
ATCTGAGGAGAATTTAATTTGTGTGGATTTTTAGGATTTATTTCAGAAAGAAACTATGAATCACTTTTAGTTGATTCTCT
TGATGTCATTAAGCATCGTG

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MLKRLFKDSVTYTLPSLISRGMSFFLIPLYTKVLTTADYGSFDLFLIFVNIINLTIALEVSQGLARYFTSEDNTNSKVLY
ASSAFWFTFAVYTIFSVLLLIFHKKLSFMVMGQLNVENAFILGILYIWSNGLFYLIQNQFRWELRSKEYAVISIIMSVAT
AFVSVLAAYFLDYGLEGLLFGLLIGNLIGGIFGLWLLRNTFRFRFSLIKLKEMLVFSIPLVFSGVAVWLSLYIDRIMIKH
LMTISDVGLYGLGYRVSSIAGLAMVGFQGALTPLIYKHYHEKTTPPQLARIFRYFVTLILLIFILISFFAENILHLIVTE
EFYYSYSVIIFLVPAIILSNMYIFAPGMAIAKKTSYFVIVNIIGATLNIVLNYVLIPIFGIQGAAVATLISYFIVFTIYM
ILSQKIYYVPHDFKPIIASTLLVSLLAWFIPIIHESFYLLLIYKSIALIFCILLFLLAGLISLKDFKQFRDLLKK

Sequences:

>Translated_475_residues
MLKRLFKDSVTYTLPSLISRGMSFFLIPLYTKVLTTADYGSFDLFLIFVNIINLTIALEVSQGLARYFTSEDNTNSKVLY
ASSAFWFTFAVYTIFSVLLLIFHKKLSFMVMGQLNVENAFILGILYIWSNGLFYLIQNQFRWELRSKEYAVISIIMSVAT
AFVSVLAAYFLDYGLEGLLFGLLIGNLIGGIFGLWLLRNTFRFRFSLIKLKEMLVFSIPLVFSGVAVWLSLYIDRIMIKH
LMTISDVGLYGLGYRVSSIAGLAMVGFQGALTPLIYKHYHEKTTPPQLARIFRYFVTLILLIFILISFFAENILHLIVTE
EFYYSYSVIIFLVPAIILSNMYIFAPGMAIAKKTSYFVIVNIIGATLNIVLNYVLIPIFGIQGAAVATLISYFIVFTIYM
ILSQKIYYVPHDFKPIIASTLLVSLLAWFIPIIHESFYLLLIYKSIALIFCILLFLLAGLISLKDFKQFRDLLKK
>Mature_475_residues
MLKRLFKDSVTYTLPSLISRGMSFFLIPLYTKVLTTADYGSFDLFLIFVNIINLTIALEVSQGLARYFTSEDNTNSKVLY
ASSAFWFTFAVYTIFSVLLLIFHKKLSFMVMGQLNVENAFILGILYIWSNGLFYLIQNQFRWELRSKEYAVISIIMSVAT
AFVSVLAAYFLDYGLEGLLFGLLIGNLIGGIFGLWLLRNTFRFRFSLIKLKEMLVFSIPLVFSGVAVWLSLYIDRIMIKH
LMTISDVGLYGLGYRVSSIAGLAMVGFQGALTPLIYKHYHEKTTPPQLARIFRYFVTLILLIFILISFFAENILHLIVTE
EFYYSYSVIIFLVPAIILSNMYIFAPGMAIAKKTSYFVIVNIIGATLNIVLNYVLIPIFGIQGAAVATLISYFIVFTIYM
ILSQKIYYVPHDFKPIIASTLLVSLLAWFIPIIHESFYLLLIYKSIALIFCILLFLLAGLISLKDFKQFRDLLKK

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family. HI_0867/HI_1700 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 54275; Mature: 54275

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRLFKDSVTYTLPSLISRGMSFFLIPLYTKVLTTADYGSFDLFLIFVNIINLTIALEV
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEH
SQGLARYFTSEDNTNSKVLYASSAFWFTFAVYTIFSVLLLIFHKKLSFMVMGQLNVENAF
HHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH
ILGILYIWSNGLFYLIQNQFRWELRSKEYAVISIIMSVATAFVSVLAAYFLDYGLEGLLF
HHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
GLLIGNLIGGIFGLWLLRNTFRFRFSLIKLKEMLVFSIPLVFSGVAVWLSLYIDRIMIKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTISDVGLYGLGYRVSSIAGLAMVGFQGALTPLIYKHYHEKTTPPQLARIFRYFVTLIL
HHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LIFILISFFAENILHLIVTEEFYYSYSVIIFLVPAIILSNMYIFAPGMAIAKKTSYFVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHCCCCEEEH
NIIGATLNIVLNYVLIPIFGIQGAAVATLISYFIVFTIYMILSQKIYYVPHDFKPIIAST
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
LLVSLLAWFIPIIHESFYLLLIYKSIALIFCILLFLLAGLISLKDFKQFRDLLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKRLFKDSVTYTLPSLISRGMSFFLIPLYTKVLTTADYGSFDLFLIFVNIINLTIALEV
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEH
SQGLARYFTSEDNTNSKVLYASSAFWFTFAVYTIFSVLLLIFHKKLSFMVMGQLNVENAF
HHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH
ILGILYIWSNGLFYLIQNQFRWELRSKEYAVISIIMSVATAFVSVLAAYFLDYGLEGLLF
HHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
GLLIGNLIGGIFGLWLLRNTFRFRFSLIKLKEMLVFSIPLVFSGVAVWLSLYIDRIMIKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTISDVGLYGLGYRVSSIAGLAMVGFQGALTPLIYKHYHEKTTPPQLARIFRYFVTLIL
HHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LIFILISFFAENILHLIVTEEFYYSYSVIIFLVPAIILSNMYIFAPGMAIAKKTSYFVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHCCCCEEEH
NIIGATLNIVLNYVLIPIFGIQGAAVATLISYFIVFTIYMILSQKIYYVPHDFKPIIAST
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
LLVSLLAWFIPIIHESFYLLLIYKSIALIFCILLFLLAGLISLKDFKQFRDLLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]