Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005435
Identifier: 93005435
GI number: 93005435
Start: 720708
End: 721451
Strand: Direct
Name: 93005435
Synonym: Pcryo_0605
Alternate gene names: NA
Gene position: 720708-721451 (Clockwise)
Preceding gene: 93005433
Following gene: 93005436
Centisome position: 23.55
GC content: 43.01
Gene sequence:
>744_bases ATGGTCATAAGTTTGACAAGAATGCTACAGTCATTTGGGCAAGCACATGATGACCTGCCAACCGCCGCTGCTAAAAATGC TCAGCAAGCGGCTGCCAATAAACTTACTAATAATAAAAATGATGTCAATACTTCAACGTCTAATGCTTCGCCGCTTACTG AGCCACAGCGTACCGAACGTATTTGTGATGCTTTAGCGCAAGTGTCTGATATTCGTGCACCGACGCCATTGACCGATCGT TATTTGTCCAATCGTGCTCAAATGCGACCGAGTAATAGACCACCTTTTGACCCAGATACCTTATGGTTTCTTAAACATGG ACGCTGTCCGATTATGACTGAGCTTGTGAATGTGGTCGATGCAGCCACGCTAAATGCGATGCCAATTGAAGCAGTTGCTA TTTTAGATAGAATCAATGGCAAATTAAAACGCTATCGTGAATGGAGTAGCGAGCTTAATGATGAGCAGAAGCAGCAACAT AATGAGCGGCAGTTTGTCATTGATAAGCTGATATCTGAAAGTATTCCAGAAGCCTTGCATCATTACGAGCAGCTGCAACG TTTTAGTCCACATCGTACGAAGAATAATGTAGTACAGGGTAAAATGACCGCAGGCGATATGCTGACGGATTTGTTTTTAG AGATTGATTATGAGCTTGATGAATTGTTAGAGGAGCTGCATCAAACGGTGATGAATCGTCTGGCTTCAACCCATCGTTAT GTTAAAAGCCGTACGCAAAATTAG
Upstream 100 bases:
>100_bases ATGCTGACGTTTGCTTACTGGTAGTATGGCAAAAAGCTGTTAAGATAAGGGATTGAATGGTCAAATGCAATCAGTAAATG GGCGAGGAGCAGGGTAAGTT
Downstream 100 bases:
>100_bases GCGCCATTTTTCTATTCTGCTAAAAAATAAGCATCAGCAAACACAAACAACTCAATGCATAACAATATAGGGCTTTAATA GAGCCTTATTTTTTTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MVISLTRMLQSFGQAHDDLPTAAAKNAQQAAANKLTNNKNDVNTSTSNASPLTEPQRTERICDALAQVSDIRAPTPLTDR YLSNRAQMRPSNRPPFDPDTLWFLKHGRCPIMTELVNVVDAATLNAMPIEAVAILDRINGKLKRYREWSSELNDEQKQQH NERQFVIDKLISESIPEALHHYEQLQRFSPHRTKNNVVQGKMTAGDMLTDLFLEIDYELDELLEELHQTVMNRLASTHRY VKSRTQN
Sequences:
>Translated_247_residues MVISLTRMLQSFGQAHDDLPTAAAKNAQQAAANKLTNNKNDVNTSTSNASPLTEPQRTERICDALAQVSDIRAPTPLTDR YLSNRAQMRPSNRPPFDPDTLWFLKHGRCPIMTELVNVVDAATLNAMPIEAVAILDRINGKLKRYREWSSELNDEQKQQH NERQFVIDKLISESIPEALHHYEQLQRFSPHRTKNNVVQGKMTAGDMLTDLFLEIDYELDELLEELHQTVMNRLASTHRY VKSRTQN >Mature_247_residues MVISLTRMLQSFGQAHDDLPTAAAKNAQQAAANKLTNNKNDVNTSTSNASPLTEPQRTERICDALAQVSDIRAPTPLTDR YLSNRAQMRPSNRPPFDPDTLWFLKHGRCPIMTELVNVVDAATLNAMPIEAVAILDRINGKLKRYREWSSELNDEQKQQH NERQFVIDKLISESIPEALHHYEQLQRFSPHRTKNNVVQGKMTAGDMLTDLFLEIDYELDELLEELHQTVMNRLASTHRY VKSRTQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28218; Mature: 28218
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVISLTRMLQSFGQAHDDLPTAAAKNAQQAAANKLTNNKNDVNTSTSNASPLTEPQRTER CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH ICDALAQVSDIRAPTPLTDRYLSNRAQMRPSNRPPFDPDTLWFLKHGRCPIMTELVNVVD HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH AATLNAMPIEAVAILDRINGKLKRYREWSSELNDEQKQQHNERQFVIDKLISESIPEALH HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HYEQLQRFSPHRTKNNVVQGKMTAGDMLTDLFLEIDYELDELLEELHQTVMNRLASTHRY HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VKSRTQN HHHHCCC >Mature Secondary Structure MVISLTRMLQSFGQAHDDLPTAAAKNAQQAAANKLTNNKNDVNTSTSNASPLTEPQRTER CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH ICDALAQVSDIRAPTPLTDRYLSNRAQMRPSNRPPFDPDTLWFLKHGRCPIMTELVNVVD HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH AATLNAMPIEAVAILDRINGKLKRYREWSSELNDEQKQQHNERQFVIDKLISESIPEALH HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HYEQLQRFSPHRTKNNVVQGKMTAGDMLTDLFLEIDYELDELLEELHQTVMNRLASTHRY HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VKSRTQN HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA