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The map label for this gene is ychE [H]

Identifier: 93005433

GI number: 93005433

Start: 719248

End: 719853

Strand: Direct

Name: ychE [H]

Synonym: Pcryo_0603

Alternate gene names: 93005433

Gene position: 719248-719853 (Clockwise)

Preceding gene: 93005432

Following gene: 93005435

Centisome position: 23.51

GC content: 42.41

Gene sequence:

>606_bases
ATGGTATTGATTAACCCCTTTAGCGCATTGACATTGTTTTTAGATTCAACGCGTGGTTATTCAATGAATAATCGACGTAA
AGTAGCGCGCGTTGCTTGTCTGACCATTTTTATTACTATCAGTTTCTTTACCTTAGCAGGCGAAACGCTCCTCAAAGTCT
TGGGTATTTCAATCGGCTCGTTTCAGTTAGCAGGTGGTATCTTAGTGTTTTTAATCGCTCTCAATATGATGAATGGCGAT
GGTAATCCGGTTAAGCCTGATCAAGAAAACTTCGATGTTGACCATCTCCAAGGTGCGCCGCCAACGATGGCAGCCGCGGT
TGTGCCGATTGCTATTCCTATGATGATTGGACCGGGTGGTATTTCAACCGTTATTATCTACTCATCACAAGTTTCCGGCA
TCTTGCAAATATCTGCCATTTTGATTGCGGGTTTGTTTATCAGTTTATTTTGTTATTTGGCATTGATGGCAGCCGGTCGT
ATCAGTCGCTTATTGGGTGATACAGGGCTTAATATTATGAGTCGAATCATGGGTATGCTATTGGCGGCAGTTGCTATCGA
AATTATCGTTAACGGGCTACGTACGCTATTTCCTGATTTGATCTAA

Upstream 100 bases:

>100_bases
TTGATGCACTTGCCCAATGGCCTTGTTTTTTGCCCGATTTGACTAATAGACAAGCGAGCGCTCAGTGAATACTGAAATTA
TTAAGATAATCCTAGCCTTT

Downstream 100 bases:

>100_bases
TTTTTTAGTCTATAGAAGCGATTTAATCGCTCAAAAAACCAAATACTTTTTTAACAGTATTTGGTTTTTCTGTTTTTTAA
GCAGTATATTATTTTTTAGA

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MVLINPFSALTLFLDSTRGYSMNNRRKVARVACLTIFITISFFTLAGETLLKVLGISIGSFQLAGGILVFLIALNMMNGD
GNPVKPDQENFDVDHLQGAPPTMAAAVVPIAIPMMIGPGGISTVIIYSSQVSGILQISAILIAGLFISLFCYLALMAAGR
ISRLLGDTGLNIMSRIMGMLLAAVAIEIIVNGLRTLFPDLI

Sequences:

>Translated_201_residues
MVLINPFSALTLFLDSTRGYSMNNRRKVARVACLTIFITISFFTLAGETLLKVLGISIGSFQLAGGILVFLIALNMMNGD
GNPVKPDQENFDVDHLQGAPPTMAAAVVPIAIPMMIGPGGISTVIIYSSQVSGILQISAILIAGLFISLFCYLALMAAGR
ISRLLGDTGLNIMSRIMGMLLAAVAIEIIVNGLRTLFPDLI
>Mature_201_residues
MVLINPFSALTLFLDSTRGYSMNNRRKVARVACLTIFITISFFTLAGETLLKVLGISIGSFQLAGGILVFLIALNMMNGD
GNPVKPDQENFDVDHLQGAPPTMAAAVVPIAIPMMIGPGGISTVIIYSSQVSGILQISAILIAGLFISLFCYLALMAAGR
ISRLLGDTGLNIMSRIMGMLLAAVAIEIIVNGLRTLFPDLI

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=200, Percent_Identity=34.5, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787809, Length=196, Percent_Identity=27.5510204081633, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1789842, Length=195, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21346; Mature: 21346

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLINPFSALTLFLDSTRGYSMNNRRKVARVACLTIFITISFFTLAGETLLKVLGISIGS
CEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FQLAGGILVFLIALNMMNGDGNPVKPDQENFDVDHLQGAPPTMAAAVVPIAIPMMIGPGG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHEECCCC
ISTVIIYSSQVSGILQISAILIAGLFISLFCYLALMAAGRISRLLGDTGLNIMSRIMGML
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LAAVAIEIIVNGLRTLFPDLI
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVLINPFSALTLFLDSTRGYSMNNRRKVARVACLTIFITISFFTLAGETLLKVLGISIGS
CEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
FQLAGGILVFLIALNMMNGDGNPVKPDQENFDVDHLQGAPPTMAAAVVPIAIPMMIGPGG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHEECCCC
ISTVIIYSSQVSGILQISAILIAGLFISLFCYLALMAAGRISRLLGDTGLNIMSRIMGML
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LAAVAIEIIVNGLRTLFPDLI
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]