Click here to switch to the map view.

The map label for this gene is ykjA [H]

Identifier: 93005264

GI number: 93005264

Start: 531331

End: 531870

Strand: Reverse

Name: ykjA [H]

Synonym: Pcryo_0434

Alternate gene names: 93005264

Gene position: 531870-531331 (Counterclockwise)

Preceding gene: 93005265

Following gene: 93005263

Centisome position: 17.38

GC content: 39.81

Gene sequence:

>540_bases
ATGGAAATGATTTTTTTTGACAATGTTGATAAGCTTGGACGTATTATTCTGACCACGGTCGTGGTCTACGTTTTGATTGT
TACGTTTACTAAAATTTCAGGCAAACGATCAACCTCTCAGCTAAATAATTTTGACTGGATTGTTACGGTGATGATTGGGT
CATTAAGTGCCAGCACAATTTTACTCAAAGATATTCCGATTATCGAAGGTATGGCGGCTATTCTTTCACTGTATTTATTA
CAATTTTTGGTCACCAAATACGCCTCTATTTCGCCACAATTTAGCAGCTTTATTTTATCTGAGCCGCGCATTGTCTTTTA
TCAAGGGCAGTTTTTACCCGATGCCATGCGCGATGAACGTTTGACCCGCCAAGAAATTGAATGTGCCATGCGCTCTGAGG
GTATTCATAATTTTGATGAGGTTGAAGCCGTTGTTTTTGAGTCGGATGCTAAACTCACCATTATTCCAAAACCGAATACC
TCTAATGATGATCCAGAAGCAGAAGACACAGTCTCAGAGACGATTGCTCCGCTTATGTAA

Upstream 100 bases:

>100_bases
CGTTATAAACAAGCAACTACAAAGTTTTTGCCCTATTCATCTCTAAATTCCGTTACGCTGTATTTACGCTGATGAACTTT
GATGAATAGGAGATAAGACC

Downstream 100 bases:

>100_bases
TACAGTTGATAAAATTTTTACTAAAAACTTGATCAGCTCTAAAAAGGATAGAGCAGTATGACTCTTCTCTTTGTCTTACT
TTATCCTTTTTAGGTAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MEMIFFDNVDKLGRIILTTVVVYVLIVTFTKISGKRSTSQLNNFDWIVTVMIGSLSASTILLKDIPIIEGMAAILSLYLL
QFLVTKYASISPQFSSFILSEPRIVFYQGQFLPDAMRDERLTRQEIECAMRSEGIHNFDEVEAVVFESDAKLTIIPKPNT
SNDDPEAEDTVSETIAPLM

Sequences:

>Translated_179_residues
MEMIFFDNVDKLGRIILTTVVVYVLIVTFTKISGKRSTSQLNNFDWIVTVMIGSLSASTILLKDIPIIEGMAAILSLYLL
QFLVTKYASISPQFSSFILSEPRIVFYQGQFLPDAMRDERLTRQEIECAMRSEGIHNFDEVEAVVFESDAKLTIIPKPNT
SNDDPEAEDTVSETIAPLM
>Mature_179_residues
MEMIFFDNVDKLGRIILTTVVVYVLIVTFTKISGKRSTSQLNNFDWIVTVMIGSLSASTILLKDIPIIEGMAAILSLYLL
QFLVTKYASISPQFSSFILSEPRIVFYQGQFLPDAMRDERLTRQEIECAMRSEGIHNFDEVEAVVFESDAKLTIIPKPNT
SNDDPEAEDTVSETIAPLM

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=151, Percent_Identity=21.8543046357616, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 20136; Mature: 20136

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMIFFDNVDKLGRIILTTVVVYVLIVTFTKISGKRSTSQLNNFDWIVTVMIGSLSASTI
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCEE
LLKDIPIIEGMAAILSLYLLQFLVTKYASISPQFSSFILSEPRIVFYQGQFLPDAMRDER
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHH
LTRQEIECAMRSEGIHNFDEVEAVVFESDAKLTIIPKPNTSNDDPEAEDTVSETIAPLM
HHHHHHHHHHHHCCCCCHHHHHEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEMIFFDNVDKLGRIILTTVVVYVLIVTFTKISGKRSTSQLNNFDWIVTVMIGSLSASTI
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCEE
LLKDIPIIEGMAAILSLYLLQFLVTKYASISPQFSSFILSEPRIVFYQGQFLPDAMRDER
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHH
LTRQEIECAMRSEGIHNFDEVEAVVFESDAKLTIIPKPNTSNDDPEAEDTVSETIAPLM
HHHHHHHHHHHHCCCCCHHHHHEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]