Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is yceA [C]
Identifier: 93005241
GI number: 93005241
Start: 500360
End: 501418
Strand: Reverse
Name: yceA [C]
Synonym: Pcryo_0411
Alternate gene names: 93005241
Gene position: 501418-500360 (Counterclockwise)
Preceding gene: 93005242
Following gene: 93005239
Centisome position: 16.39
GC content: 44.19
Gene sequence:
>1059_bases ATGAGTACCTCACAGACTGATAACGTAAAAGCATCAACCCATGCGACCGAATACGACAGCGTGACCAATAATATTGTCGT CGCTGCCCTATATAAATTCACTCGCTTTGCTGACTTTGAAAAGTACCGCGACCCAATTCTAAATACTATGCTCGACAATG ACGTCAAAGGTACGTTGCTAATCGCTAGTGAAGGTATTAACGGGACCATTTCTGGCACACGCCAAGGTATCGATAATGTC CTAGACTATCTGCGTAGTATCGAAGAAATTGGCAGTTTTACTTTTAAAGAATCTTATACTGATGCCCAGCCTTTTTATCG CACCAAAGTAAAGCTTAAAAAGGAAATTGTCACGATGGGTGTGGAGAATATCGATCCATTGCAGTCGGTAGGTCGCTATG TCAAGCCAAGCGACTGGAATGCCCTAATCTCAGACCCTGATGTCATCCTGATTGATACGCGTAATGATTATGAAGTAAAA ATTGGCACGTTCCAAAATGCGGTCAATCCTAATACCGAAACGTTTCGTGAATTCCCAGAATACGTGGCAAAAGAGCTAGA CCCAAGCAAGCATAAAAAAGTCGCCATGTTCTGTACGGGCGGTATCCGCTGCGAAAAATCAACGGCATTTATGCGCGAGC AAGGTTTTGAAGAGGTTTATCATTTAGAGGGCGGCATTTTAAAATATCTAGAAGAAGTACCTGCCAGCGATTCTATGTGG GAAGGCGATTGCTTCGTCTTTGATAACCGTGTCTCAGTCAATCATAACTTAGAAAAAGGCAGTTATGAGCAGTGTTTTGC CTGTCGTATGCCGATTACGCAAGCTGAGATGCAAAGTCCTGCCTATATAAAGGGTGAGTCATGTCCGCACTGTATCGATA AAGCGACCGATGAGCAAAAAGCACGCTTTCGTGAGCGTGAGCATCAAATGCAATTGGCACAAAAACGTGGTGAAGCCCAT ATCGGTAGTGACGTCATTGATGTCATTGAGAAGCGCAAAGCAGCTAAGATCGAAGCTCGCCGTCAAGCAGACGCAGCCAA TAAAACTAAAGCTGGCTAA
Upstream 100 bases:
>100_bases GCTAGTGTTATGAATCTTACCAACTCATTCTAACCGTTAATGATAAAAAGCACCTTAACCCAATGCACTAGGTTTGCGAC CTAGCCAGCAGGAGAAAAAC
Downstream 100 bases:
>100_bases ATTTATGCCTTAGGGACATGGAAAATGCGATAAAAAAAGAGAGGCTCTTATGAATAGAGCCTCTCTTTTTTGTTATTCGC TATTTATAGCGCTAACTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSTSQTDNVKASTHATEYDSVTNNIVVAALYKFTRFADFEKYRDPILNTMLDNDVKGTLLIASEGINGTISGTRQGIDNV LDYLRSIEEIGSFTFKESYTDAQPFYRTKVKLKKEIVTMGVENIDPLQSVGRYVKPSDWNALISDPDVILIDTRNDYEVK IGTFQNAVNPNTETFREFPEYVAKELDPSKHKKVAMFCTGGIRCEKSTAFMREQGFEEVYHLEGGILKYLEEVPASDSMW EGDCFVFDNRVSVNHNLEKGSYEQCFACRMPITQAEMQSPAYIKGESCPHCIDKATDEQKARFREREHQMQLAQKRGEAH IGSDVIDVIEKRKAAKIEARRQADAANKTKAG
Sequences:
>Translated_352_residues MSTSQTDNVKASTHATEYDSVTNNIVVAALYKFTRFADFEKYRDPILNTMLDNDVKGTLLIASEGINGTISGTRQGIDNV LDYLRSIEEIGSFTFKESYTDAQPFYRTKVKLKKEIVTMGVENIDPLQSVGRYVKPSDWNALISDPDVILIDTRNDYEVK IGTFQNAVNPNTETFREFPEYVAKELDPSKHKKVAMFCTGGIRCEKSTAFMREQGFEEVYHLEGGILKYLEEVPASDSMW EGDCFVFDNRVSVNHNLEKGSYEQCFACRMPITQAEMQSPAYIKGESCPHCIDKATDEQKARFREREHQMQLAQKRGEAH IGSDVIDVIEKRKAAKIEARRQADAANKTKAG >Mature_351_residues STSQTDNVKASTHATEYDSVTNNIVVAALYKFTRFADFEKYRDPILNTMLDNDVKGTLLIASEGINGTISGTRQGIDNVL DYLRSIEEIGSFTFKESYTDAQPFYRTKVKLKKEIVTMGVENIDPLQSVGRYVKPSDWNALISDPDVILIDTRNDYEVKI GTFQNAVNPNTETFREFPEYVAKELDPSKHKKVAMFCTGGIRCEKSTAFMREQGFEEVYHLEGGILKYLEEVPASDSMWE GDCFVFDNRVSVNHNLEKGSYEQCFACRMPITQAEMQSPAYIKGESCPHCIDKATDEQKARFREREHQMQLAQKRGEAHI GSDVIDVIEKRKAAKIEARRQADAANKTKAG
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=217, Percent_Identity=36.8663594470046, Blast_Score=139, Evalue=5e-33, Organism=Escherichia coli, GI1787294, Length=231, Percent_Identity=33.3333333333333, Blast_Score=135, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 39842; Mature: 39711
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSQTDNVKASTHATEYDSVTNNIVVAALYKFTRFADFEKYRDPILNTMLDNDVKGTLL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE IASEGINGTISGTRQGIDNVLDYLRSIEEIGSFTFKESYTDAQPFYRTKVKLKKEIVTMG EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHC VENIDPLQSVGRYVKPSDWNALISDPDVILIDTRNDYEVKIGTFQNAVNPNTETFREFPE CCCCCHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCEEEEECHHCCCCCCHHHHHHHHH YVAKELDPSKHKKVAMFCTGGIRCEKSTAFMREQGFEEVYHLEGGILKYLEEVPASDSMW HHHHHCCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC EGDCFVFDNRVSVNHNLEKGSYEQCFACRMPITQAEMQSPAYIKGESCPHCIDKATDEQK CCCEEEEECEEEECCCCCCCCHHHHHHHCCCCHHHHHCCCCEECCCCCCHHHHCCCCHHH ARFREREHQMQLAQKRGEAHIGSDVIDVIEKRKAAKIEARRQADAANKTKAG HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure STSQTDNVKASTHATEYDSVTNNIVVAALYKFTRFADFEKYRDPILNTMLDNDVKGTLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE IASEGINGTISGTRQGIDNVLDYLRSIEEIGSFTFKESYTDAQPFYRTKVKLKKEIVTMG EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHC VENIDPLQSVGRYVKPSDWNALISDPDVILIDTRNDYEVKIGTFQNAVNPNTETFREFPE CCCCCHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCEEEEECHHCCCCCCHHHHHHHHH YVAKELDPSKHKKVAMFCTGGIRCEKSTAFMREQGFEEVYHLEGGILKYLEEVPASDSMW HHHHHCCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC EGDCFVFDNRVSVNHNLEKGSYEQCFACRMPITQAEMQSPAYIKGESCPHCIDKATDEQK CCCEEEEECEEEECCCCCCCCHHHHHHHCCCCHHHHHCCCCEECCCCCCHHHHCCCCHHH ARFREREHQMQLAQKRGEAHIGSDVIDVIEKRKAAKIEARRQADAANKTKAG HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA