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The map label for this gene is ycgF [C]

Identifier: 93005238

GI number: 93005238

Start: 496388

End: 497020

Strand: Direct

Name: ycgF [C]

Synonym: Pcryo_0408

Alternate gene names: 93005238

Gene position: 496388-497020 (Clockwise)

Preceding gene: 93005235

Following gene: 93005240

Centisome position: 16.22

GC content: 43.76

Gene sequence:

>633_bases
ATGACGCCTGAAATTCATACTGCTGTTTTTAGAACATTAGATGACATTGAAGATACTGCACTGGTGCAATTGGTGTACGT
CAGTAGCATGACGCTTAGTTCGCGTTTTAGTACGACGATATTCGAAGAAGTAGAAAGTCATGCGCGTAATTATAATCAGC
AACAGGGTATTACAGGCACGTTATGCTATGGCAATGGGCATTTTTTGCAGTGCATTGAGGGTGAAAAGGCCAGAGTACTG
ACGCTAATTCAACGTATATATGTCGATACCCGTCATAAAAACATTCAAGTGCTATTAGTGCAAGTCATCAAGCAGCGCAG
TTTTTCTGATTGGCGTATGCGCTTACTGTTTTTGGAACGTTGGTTATGGTCACCTGCGACCAAAAAACAAGCGGCACAGC
TATCACCGTTTTTGCCATTTTCGCCCCACGATTGGAGACCTGATCATACCGAATTATTCTTACAAGTGATCAAAAATTTT
GATACGCCGCCTCATATCAATGCAGCGGGCATCACTTACAATGCGCTAGGTAATATGGTGCGCCATGTCGCTGCGCCGCA
TCAGGCTTTTTTAGTTGTCCAGGGTTTTTTGAGTGTGCTGCTCGTCGCAGGTTTAGCGCTGCTATATGTATAA

Upstream 100 bases:

>100_bases
CTTTCTGCCTCGTCGAGACATCATTTGATAAATTTATATTTAATTTTATTTGGTTATTTTTCCTTGCTCATATTTGATAT
TAACCCGTTAGGAATTTTTA

Downstream 100 bases:

>100_bases
TTTATGCCACTTTAGAAAGATATAGGCGATTCACTCAAATATATCGTACTAGTGTTATTTGAGCATAAAAAAAGACGCTA
ATCTTATCAATTGCGCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: BLUF Domain Protein; Sensors Of Blue-Light Using FAD Family; Bluf Domain Protein

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTPEIHTAVFRTLDDIEDTALVQLVYVSSMTLSSRFSTTIFEEVESHARNYNQQQGITGTLCYGNGHFLQCIEGEKARVL
TLIQRIYVDTRHKNIQVLLVQVIKQRSFSDWRMRLLFLERWLWSPATKKQAAQLSPFLPFSPHDWRPDHTELFLQVIKNF
DTPPHINAAGITYNALGNMVRHVAAPHQAFLVVQGFLSVLLVAGLALLYV

Sequences:

>Translated_210_residues
MTPEIHTAVFRTLDDIEDTALVQLVYVSSMTLSSRFSTTIFEEVESHARNYNQQQGITGTLCYGNGHFLQCIEGEKARVL
TLIQRIYVDTRHKNIQVLLVQVIKQRSFSDWRMRLLFLERWLWSPATKKQAAQLSPFLPFSPHDWRPDHTELFLQVIKNF
DTPPHINAAGITYNALGNMVRHVAAPHQAFLVVQGFLSVLLVAGLALLYV
>Mature_209_residues
TPEIHTAVFRTLDDIEDTALVQLVYVSSMTLSSRFSTTIFEEVESHARNYNQQQGITGTLCYGNGHFLQCIEGEKARVLT
LIQRIYVDTRHKNIQVLLVQVIKQRSFSDWRMRLLFLERWLWSPATKKQAAQLSPFLPFSPHDWRPDHTELFLQVIKNFD
TPPHINAAGITYNALGNMVRHVAAPHQAFLVVQGFLSVLLVAGLALLYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24006; Mature: 23875

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEIHTAVFRTLDDIEDTALVQLVYVSSMTLSSRFSTTIFEEVESHARNYNQQQGITGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEE
LCYGNGHFLQCIEGEKARVLTLIQRIYVDTRHKNIQVLLVQVIKQRSFSDWRMRLLFLER
EEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
WLWSPATKKQAAQLSPFLPFSPHDWRPDHTELFLQVIKNFDTPPHINAAGITYNALGNMV
HHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
RHVAAPHQAFLVVQGFLSVLLVAGLALLYV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPEIHTAVFRTLDDIEDTALVQLVYVSSMTLSSRFSTTIFEEVESHARNYNQQQGITGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEE
LCYGNGHFLQCIEGEKARVLTLIQRIYVDTRHKNIQVLLVQVIKQRSFSDWRMRLLFLER
EEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
WLWSPATKKQAAQLSPFLPFSPHDWRPDHTELFLQVIKNFDTPPHINAAGITYNALGNMV
HHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
RHVAAPHQAFLVVQGFLSVLLVAGLALLYV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA