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The map label for this gene is recO [H]

Identifier: 93005199

GI number: 93005199

Start: 447767

End: 448531

Strand: Direct

Name: recO [H]

Synonym: Pcryo_0369

Alternate gene names: 93005199

Gene position: 447767-448531 (Clockwise)

Preceding gene: 93005198

Following gene: 93005200

Centisome position: 14.63

GC content: 42.35

Gene sequence:

>765_bases
ATGCGTAACGAAGCGTTAATCGGTTATTTATTACATCAGCGCCCTTATCAAGAAAAGCGCGCCTTATATTATTTATTTTC
TCAGCAGCATGGGGTGATACATGGTATTGGTAAAAAAGGCGCGCCACTATTTATGCCTTTACAACTCTTTGCTACTGGCA
AACGTGATCTCAAAACATTCAGTCAAATCAATATAGCCTCTTTTAGTTCAGTTCATACACAAGCTGTCCAAGATGATAAT
GCCGCAAATGTAGATATACGACATCAAGAAAGCATTACAGGCCAGCATCAATATGCAGCCTTGTATTTGAACGAGATATT
GTGGCGATTGTTGCCTACTGAAGATCCTATGCCCATATTATGGCAGCATTATCAAAACAGCCTAGATGCGCTCAAAAAAC
CCCTAACCGCTGACGAGCTACGTCTGTGCTTGCGCCAGTTTGAGAGCTATCTATTTAATGAGTTGGGATTTTCACTGACG
TTACATCAAGACAGCCTTGAAAACCCTATTGAGCCTGAACAGGTTTACCGATTCTTACCCGATATGGGCTTAGTGCCGAC
TTTGCACACAGAGGATGTAGAAAGTATGGTTGGTCATGCGGTTTTTAAAGGGAATGATATTTTGCTCATGATAGAGCAAG
GGTTGTCCGTTAGTACGCTGAACGCATGGTCGCGTTTACATCGGCAGTTGATTGATCATATGCTTGATTATCAACCGCTG
CAAAGTCGTCTGCTTTGGCAGCAGCAACAGCGTTATCAACTATAA

Upstream 100 bases:

>100_bases
GTTGGTCGGATGATGAAAGAGCCTTGACCAGTTTAGGCTATTAAAAATATTAATAGCGACTCTCTTTTATATTGAGTGAA
CTATAGCTGAGGTAATAATC

Downstream 100 bases:

>100_bases
AGCGTATTTAACAATAGAATATGTTCACAACTACTTATCATCAATAAGCTATTTTTAGTAAATGATCTAACTATTAATAA
AAGGATTTTTATGACGGATA

Product: recombination protein O, RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRNEALIGYLLHQRPYQEKRALYYLFSQQHGVIHGIGKKGAPLFMPLQLFATGKRDLKTFSQINIASFSSVHTQAVQDDN
AANVDIRHQESITGQHQYAALYLNEILWRLLPTEDPMPILWQHYQNSLDALKKPLTADELRLCLRQFESYLFNELGFSLT
LHQDSLENPIEPEQVYRFLPDMGLVPTLHTEDVESMVGHAVFKGNDILLMIEQGLSVSTLNAWSRLHRQLIDHMLDYQPL
QSRLLWQQQQRYQL

Sequences:

>Translated_254_residues
MRNEALIGYLLHQRPYQEKRALYYLFSQQHGVIHGIGKKGAPLFMPLQLFATGKRDLKTFSQINIASFSSVHTQAVQDDN
AANVDIRHQESITGQHQYAALYLNEILWRLLPTEDPMPILWQHYQNSLDALKKPLTADELRLCLRQFESYLFNELGFSLT
LHQDSLENPIEPEQVYRFLPDMGLVPTLHTEDVESMVGHAVFKGNDILLMIEQGLSVSTLNAWSRLHRQLIDHMLDYQPL
QSRLLWQQQQRYQL
>Mature_254_residues
MRNEALIGYLLHQRPYQEKRALYYLFSQQHGVIHGIGKKGAPLFMPLQLFATGKRDLKTFSQINIASFSSVHTQAVQDDN
AANVDIRHQESITGQHQYAALYLNEILWRLLPTEDPMPILWQHYQNSLDALKKPLTADELRLCLRQFESYLFNELGFSLT
LHQDSLENPIEPEQVYRFLPDMGLVPTLHTEDVESMVGHAVFKGNDILLMIEQGLSVSTLNAWSRLHRQLIDHMLDYQPL
QSRLLWQQQQRYQL

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 29552; Mature: 29552

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNEALIGYLLHQRPYQEKRALYYLFSQQHGVIHGIGKKGAPLFMPLQLFATGKRDLKTF
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHCCHHHHHHH
SQINIASFSSVHTQAVQDDNAANVDIRHQESITGQHQYAALYLNEILWRLLPTEDPMPIL
HHHCHHHHHHHHHHHHCCCCCCCCEEECHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH
WQHYQNSLDALKKPLTADELRLCLRQFESYLFNELGFSLTLHQDSLENPIEPEQVYRFLP
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCC
DMGLVPTLHTEDVESMVGHAVFKGNDILLMIEQGLSVSTLNAWSRLHRQLIDHMLDYQPL
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHH
QSRLLWQQQQRYQL
HHHHHHHHHHHCCC
>Mature Secondary Structure
MRNEALIGYLLHQRPYQEKRALYYLFSQQHGVIHGIGKKGAPLFMPLQLFATGKRDLKTF
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHCCHHHHHHH
SQINIASFSSVHTQAVQDDNAANVDIRHQESITGQHQYAALYLNEILWRLLPTEDPMPIL
HHHCHHHHHHHHHHHHCCCCCCCCEEECHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH
WQHYQNSLDALKKPLTADELRLCLRQFESYLFNELGFSLTLHQDSLENPIEPEQVYRFLP
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCC
DMGLVPTLHTEDVESMVGHAVFKGNDILLMIEQGLSVSTLNAWSRLHRQLIDHMLDYQPL
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHH
QSRLLWQQQQRYQL
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA