| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is secA [H]
Identifier: 93005105
GI number: 93005105
Start: 326059
End: 328839
Strand: Direct
Name: secA [H]
Synonym: Pcryo_0274
Alternate gene names: 93005105
Gene position: 326059-328839 (Clockwise)
Preceding gene: 93005102
Following gene: 93005106
Centisome position: 10.66
GC content: 44.77
Gene sequence:
>2781_bases ATGTTATCAAAGATTATAGGCAGTGTCGTTGGCACCAAAAATGAGCGTGAGCTTAAACGCATGCGCAAAGTGGTCAGCAA AATCAACGCATACGAGGCTGCGATACAAGCCCTGTCTGATGAGCAATTACAACAAAAAACTGAAGAATTTAAAGCAAGAC ACCAAGGCGGCGAAAGTCTAGATGCGTTATTGCCAGAAGCGTTTGCGATTTGTCGTGAAGCGTCGCTACGGGTTAACGGT ATGCGTCACTATGACGTGCAGCTGATCGGTGGTATTACCTTGCACGAAGGCAAAATCGCTGAGATGAAAACTGGTGAGGG TAAAACCTTGATGGGCACCTTGGCCATGTACCTCAATGCCATCAGTGGCAAAGGCGTACATTTGGTGACGGTTAATGATT ATTTGGCGGCACGTGATGCGGAATTAAACCGTCCCTTATTTGGCTTTTTGGGCATGACGGTTGGCGTGATTTACTCGCAG CAACCACCACAAGAAAAAGTCGATGCTTATCAAGCGGATATCACTTACGGTACCAATAACGAGTACGGTTTTGATTATTT GCGCGATAACATGGTCTTTAGTTTAAAAGAGAAAAAGCAGCGCCCGCTAAACTTCTGTATTATCGATGAAATTGACTCTA TTTTAATCGATGAAGCTCGTACGCCGTTGATTATCTCGGGTCAAGCGGAAGATTCATCACGCATGTATGCGCTGATTAAT ACCATTATTCCCGTGCTGATTCGCTCAAAAGACGAAGAAGCCAATAAGAATAATGAAGAAGAAGATTTTTGGATTGATGA GAAAAATCGCCAGATTGAGATTAGTGAAAAAGGCTATGAGAAAATTGAGCGCTTCTTAATCCAAGTCGGCGAGCTTGGCG AAAACGAAAGTCTTTACAGCCCAAGCCGTTTGCCATTATTGGCTCACGTACAAGCGGCGATTCGCGCCCATCATGTCTTT GTGAAAAATATCCATTATATTGTTGATGACGGCGAAGTGGTTATCGTTGATGAAAACACTGGTCGTACCATGCCTGGTCG CCGCTGGTCAGAAGGTCTGCATCAAGCCGTTGAAGCCAAAGAAAACGTCGAGATTCAAGCCGAAAATCAAACCCTTGCAA CCACTACATTCCAGAATTTTTTCCGTCTGTATGACAAACTGTCTGGTATGACGGGTACCGCTGATACTGAAGCAGCAGAA TTTAAATCAACCTATGACTTAGATGTCATTGTGATTCCAACGCATGAGCCGATTGCTCGTGTCGATATGGATGACCAAAT TTTCTTAACCAAGTTAGGCAAATACAAAGGCATTATCCGCGAGATTCAAGAGATTCAAGCAAAAGGCGCGCCAGTATTGG TTGGTACGGCAACGATTGAAGCCAGTGAAGAATTGTCTTATCTGCTCGATCAAGAAGGTGTTAAGCATAATGTGCTAAAC GCTAAGCAGCATGAGCGTGAAGCTGAAATCATTGCGCAGGCAGGTAGTCCAAAATCGGTCACGATTGCTACCAATATGGC AGGTCGTGGTACCGATATTATCCTTGGCGGTAACTGGCAATCGTTTATTGAAGATATTGATGCGGTTAGCCCTGAAGAAA TGGCGCGTCTAAAAGCCCAATGGCAAATCAAGCATGACCAAGTCGTTGCGGCTGGTGGTTTGCATATTATTGGTTCTGAA CGTCATGAATCACGCCGTATTGATAATCAGCTGCGTGGTCGTGCGGGTCGTCAAGGTGATCCTGGGATGTCACGTTTCTT CTTATCACTTGAAGATGACTTAATGCGTATCTTCGCCGGTGACCGTGTCGTGAATATGATGCGTGCCATGGGGCTAAAAG AAGATGAAGCCATTGAACATAAAATGGTTTCAAAGTCGATTGAAAACGCCCAAGGTAAAGTAGAGAGTCGCGATTTTGAT GCGCGTAAAAACCTACTGAAATACGATGATGTGGCCAATGATCAACGTAAAGTCATCTATGGTCAGCGTGATGATTTGTT GGCTGAGATGGATTTATTAGAGGCCATTAAAATCATGCATCAGGAAGTCTATAATGCCATGATTAACCAGTTTATTCCGC CAGGCTCTATCGATGATCAGTGGAATGTCGATGGGTTAGAGGATGAGCTTGAGAACGAATTTAAGATTGCAATGCCCATT AACGATTGGCTTGATGAAGATCGTCGCCTAGATGAAGAAGGCTTACGAGCCAAGATCATCGAAACAGCATTGGATCGTTA TCACAGTCGCCGTGAACAAATGGGCGAAAAAGATGCGGCTCAGCTTGAGCGTCATTTTATGCTGCAAAGTTTAGATAAGC ATTGGAAAGAGCATTTAACCCAGATGGATCAGCTGCGTAAAGGTATTCATCTGCGTGGTTATGCACAGAAAAACCCTGAG CAGGAATATAAGCGTGAATCATTTGAGCTGTTCCAGATGATGCTTGGCGCGATCAAGTCTGAAACAGTACAAGACTTATC ACGTGTGCATATCCCAACCAAAGAAGAGCTAGAGGCGTTAGAAATACAGCAACGTGAAAATGCAGCCCATATGCAAATGC AGTTTGAGCATAGTGATATCGATAATATGGACGGCGGTGTGGAAAGAGCAGCAGTGCAAAGCCGCAATGTCGTTGGCGGT GCTACGGGCGCTAGCGTAGCAGGTGCTATGGCGGGCAGTAGCGATGATGCAGACCCATATGCTGGTATGAATATCAGCCG TAACGCCCCATGTCCATGTGGTTCAGCACTTAAGTATAAGCAATGTCATGGCAAAATCTAA
Upstream 100 bases:
>100_bases GTCTTAAATTGGACAGTAACCAGCCAAATAATTAAAAAAACAGCGAGTAAAGCGTTGTCATGCGCACTAATTATCGAATA TTTCCATAGGTCAAAAAATT
Downstream 100 bases:
>100_bases ACCTAGCTAACATTTCTTGATTAAAAAGTCCTTATCGAATAGATAGGGACTTTTTTTATGCCCTGAGGAGTGATGGTTGA ATAAAAATATCATCTACATT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 926; Mature: 926
Protein sequence:
>926_residues MLSKIIGSVVGTKNERELKRMRKVVSKINAYEAAIQALSDEQLQQKTEEFKARHQGGESLDALLPEAFAICREASLRVNG MRHYDVQLIGGITLHEGKIAEMKTGEGKTLMGTLAMYLNAISGKGVHLVTVNDYLAARDAELNRPLFGFLGMTVGVIYSQ QPPQEKVDAYQADITYGTNNEYGFDYLRDNMVFSLKEKKQRPLNFCIIDEIDSILIDEARTPLIISGQAEDSSRMYALIN TIIPVLIRSKDEEANKNNEEEDFWIDEKNRQIEISEKGYEKIERFLIQVGELGENESLYSPSRLPLLAHVQAAIRAHHVF VKNIHYIVDDGEVVIVDENTGRTMPGRRWSEGLHQAVEAKENVEIQAENQTLATTTFQNFFRLYDKLSGMTGTADTEAAE FKSTYDLDVIVIPTHEPIARVDMDDQIFLTKLGKYKGIIREIQEIQAKGAPVLVGTATIEASEELSYLLDQEGVKHNVLN AKQHEREAEIIAQAGSPKSVTIATNMAGRGTDIILGGNWQSFIEDIDAVSPEEMARLKAQWQIKHDQVVAAGGLHIIGSE RHESRRIDNQLRGRAGRQGDPGMSRFFLSLEDDLMRIFAGDRVVNMMRAMGLKEDEAIEHKMVSKSIENAQGKVESRDFD ARKNLLKYDDVANDQRKVIYGQRDDLLAEMDLLEAIKIMHQEVYNAMINQFIPPGSIDDQWNVDGLEDELENEFKIAMPI NDWLDEDRRLDEEGLRAKIIETALDRYHSRREQMGEKDAAQLERHFMLQSLDKHWKEHLTQMDQLRKGIHLRGYAQKNPE QEYKRESFELFQMMLGAIKSETVQDLSRVHIPTKEELEALEIQQRENAAHMQMQFEHSDIDNMDGGVERAAVQSRNVVGG ATGASVAGAMAGSSDDADPYAGMNISRNAPCPCGSALKYKQCHGKI
Sequences:
>Translated_926_residues MLSKIIGSVVGTKNERELKRMRKVVSKINAYEAAIQALSDEQLQQKTEEFKARHQGGESLDALLPEAFAICREASLRVNG MRHYDVQLIGGITLHEGKIAEMKTGEGKTLMGTLAMYLNAISGKGVHLVTVNDYLAARDAELNRPLFGFLGMTVGVIYSQ QPPQEKVDAYQADITYGTNNEYGFDYLRDNMVFSLKEKKQRPLNFCIIDEIDSILIDEARTPLIISGQAEDSSRMYALIN TIIPVLIRSKDEEANKNNEEEDFWIDEKNRQIEISEKGYEKIERFLIQVGELGENESLYSPSRLPLLAHVQAAIRAHHVF VKNIHYIVDDGEVVIVDENTGRTMPGRRWSEGLHQAVEAKENVEIQAENQTLATTTFQNFFRLYDKLSGMTGTADTEAAE FKSTYDLDVIVIPTHEPIARVDMDDQIFLTKLGKYKGIIREIQEIQAKGAPVLVGTATIEASEELSYLLDQEGVKHNVLN AKQHEREAEIIAQAGSPKSVTIATNMAGRGTDIILGGNWQSFIEDIDAVSPEEMARLKAQWQIKHDQVVAAGGLHIIGSE RHESRRIDNQLRGRAGRQGDPGMSRFFLSLEDDLMRIFAGDRVVNMMRAMGLKEDEAIEHKMVSKSIENAQGKVESRDFD ARKNLLKYDDVANDQRKVIYGQRDDLLAEMDLLEAIKIMHQEVYNAMINQFIPPGSIDDQWNVDGLEDELENEFKIAMPI NDWLDEDRRLDEEGLRAKIIETALDRYHSRREQMGEKDAAQLERHFMLQSLDKHWKEHLTQMDQLRKGIHLRGYAQKNPE QEYKRESFELFQMMLGAIKSETVQDLSRVHIPTKEELEALEIQQRENAAHMQMQFEHSDIDNMDGGVERAAVQSRNVVGG ATGASVAGAMAGSSDDADPYAGMNISRNAPCPCGSALKYKQCHGKI >Mature_926_residues MLSKIIGSVVGTKNERELKRMRKVVSKINAYEAAIQALSDEQLQQKTEEFKARHQGGESLDALLPEAFAICREASLRVNG MRHYDVQLIGGITLHEGKIAEMKTGEGKTLMGTLAMYLNAISGKGVHLVTVNDYLAARDAELNRPLFGFLGMTVGVIYSQ QPPQEKVDAYQADITYGTNNEYGFDYLRDNMVFSLKEKKQRPLNFCIIDEIDSILIDEARTPLIISGQAEDSSRMYALIN TIIPVLIRSKDEEANKNNEEEDFWIDEKNRQIEISEKGYEKIERFLIQVGELGENESLYSPSRLPLLAHVQAAIRAHHVF VKNIHYIVDDGEVVIVDENTGRTMPGRRWSEGLHQAVEAKENVEIQAENQTLATTTFQNFFRLYDKLSGMTGTADTEAAE FKSTYDLDVIVIPTHEPIARVDMDDQIFLTKLGKYKGIIREIQEIQAKGAPVLVGTATIEASEELSYLLDQEGVKHNVLN AKQHEREAEIIAQAGSPKSVTIATNMAGRGTDIILGGNWQSFIEDIDAVSPEEMARLKAQWQIKHDQVVAAGGLHIIGSE RHESRRIDNQLRGRAGRQGDPGMSRFFLSLEDDLMRIFAGDRVVNMMRAMGLKEDEAIEHKMVSKSIENAQGKVESRDFD ARKNLLKYDDVANDQRKVIYGQRDDLLAEMDLLEAIKIMHQEVYNAMINQFIPPGSIDDQWNVDGLEDELENEFKIAMPI NDWLDEDRRLDEEGLRAKIIETALDRYHSRREQMGEKDAAQLERHFMLQSLDKHWKEHLTQMDQLRKGIHLRGYAQKNPE QEYKRESFELFQMMLGAIKSETVQDLSRVHIPTKEELEALEIQQRENAAHMQMQFEHSDIDNMDGGVERAAVQSRNVVGG ATGASVAGAMAGSSDDADPYAGMNISRNAPCPCGSALKYKQCHGKI
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=929, Percent_Identity=56.4047362755651, Blast_Score=1065, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 104470; Mature: 104470
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKIIGSVVGTKNERELKRMRKVVSKINAYEAAIQALSDEQLQQKTEEFKARHQGGESL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DALLPEAFAICREASLRVNGMRHYDVQLIGGITLHEGKIAEMKTGEGKTLMGTLAMYLNA HHHHHHHHHHHHHCCCEECCCEEEEEEEEECEEECCCCEEEECCCCCCHHHHHHHHHHHH ISGKGVHLVTVNDYLAARDAELNRPLFGFLGMTVGVIYSQQPPQEKVDAYQADITYGTNN HCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEECCCC EYGFDYLRDNMVFSLKEKKQRPLNFCIIDEIDSILIDEARTPLIISGQAEDSSRMYALIN CCCHHHHHCCCEEEEHHHCCCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH TIIPVLIRSKDEEANKNNEEEDFWIDEKNRQIEISEKGYEKIERFLIQVGELGENESLYS HHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCC PSRLPLLAHVQAAIRAHHVFVKNIHYIVDDGEVVIVDENTGRTMPGRRWSEGLHQAVEAK CCCCCHHHHHHHHHHHHHHHEEEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHH ENVEIQAENQTLATTTFQNFFRLYDKLSGMTGTADTEAAEFKSTYDLDVIVIPTHEPIAR HCCEEEECCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCEE VDMDDQIFLTKLGKYKGIIREIQEIQAKGAPVLVGTATIEASEELSYLLDQEGVKHNVLN CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCHHHHCC AKQHEREAEIIAQAGSPKSVTIATNMAGRGTDIILGGNWQSFIEDIDAVSPEEMARLKAQ CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHH WQIKHDQVVAAGGLHIIGSERHESRRIDNQLRGRAGRQGDPGMSRFFLSLEDDLMRIFAG EEECCCCEEEECCEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHH DRVVNMMRAMGLKEDEAIEHKMVSKSIENAQGKVESRDFDARKNLLKYDDVANDQRKVIY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEE GQRDDLLAEMDLLEAIKIMHQEVYNAMINQFIPPGSIDDQWNVDGLEDELENEFKIAMPI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEECC NDWLDEDRRLDEEGLRAKIIETALDRYHSRREQMGEKDAAQLERHFMLQSLDKHWKEHLT HHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH QMDQLRKGIHLRGYAQKNPEQEYKRESFELFQMMLGAIKSETVQDLSRVHIPTKEELEAL HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EIQQRENAAHMQMQFEHSDIDNMDGGVERAAVQSRNVVGGATGASVAGAMAGSSDDADPY HHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC AGMNISRNAPCPCGSALKYKQCHGKI CCCCCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MLSKIIGSVVGTKNERELKRMRKVVSKINAYEAAIQALSDEQLQQKTEEFKARHQGGESL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DALLPEAFAICREASLRVNGMRHYDVQLIGGITLHEGKIAEMKTGEGKTLMGTLAMYLNA HHHHHHHHHHHHHCCCEECCCEEEEEEEEECEEECCCCEEEECCCCCCHHHHHHHHHHHH ISGKGVHLVTVNDYLAARDAELNRPLFGFLGMTVGVIYSQQPPQEKVDAYQADITYGTNN HCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEECCCC EYGFDYLRDNMVFSLKEKKQRPLNFCIIDEIDSILIDEARTPLIISGQAEDSSRMYALIN CCCHHHHHCCCEEEEHHHCCCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH TIIPVLIRSKDEEANKNNEEEDFWIDEKNRQIEISEKGYEKIERFLIQVGELGENESLYS HHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCC PSRLPLLAHVQAAIRAHHVFVKNIHYIVDDGEVVIVDENTGRTMPGRRWSEGLHQAVEAK CCCCCHHHHHHHHHHHHHHHEEEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHH ENVEIQAENQTLATTTFQNFFRLYDKLSGMTGTADTEAAEFKSTYDLDVIVIPTHEPIAR HCCEEEECCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCEE VDMDDQIFLTKLGKYKGIIREIQEIQAKGAPVLVGTATIEASEELSYLLDQEGVKHNVLN CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCHHHHCC AKQHEREAEIIAQAGSPKSVTIATNMAGRGTDIILGGNWQSFIEDIDAVSPEEMARLKAQ CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHH WQIKHDQVVAAGGLHIIGSERHESRRIDNQLRGRAGRQGDPGMSRFFLSLEDDLMRIFAG EEECCCCEEEECCEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHH DRVVNMMRAMGLKEDEAIEHKMVSKSIENAQGKVESRDFDARKNLLKYDDVANDQRKVIY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEE GQRDDLLAEMDLLEAIKIMHQEVYNAMINQFIPPGSIDDQWNVDGLEDELENEFKIAMPI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEECC NDWLDEDRRLDEEGLRAKIIETALDRYHSRREQMGEKDAAQLERHFMLQSLDKHWKEHLT HHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH QMDQLRKGIHLRGYAQKNPEQEYKRESFELFQMMLGAIKSETVQDLSRVHIPTKEELEAL HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EIQQRENAAHMQMQFEHSDIDNMDGGVERAAVQSRNVVGGATGASVAGAMAGSSDDADPY HHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC AGMNISRNAPCPCGSALKYKQCHGKI CCCCCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA